Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16b12f
(775 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h at... 272 2e-73
AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein... 272 2e-73
AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h at... 117 8e-27
Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical pr... 29 4.9
Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf (tbp-asso... 28 6.4
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical pr... 28 8.5
Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.5
AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical ... 28 8.5
>AC024762-2|AAF59474.3| 384|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoforma protein.
Length = 384
Score = 272 bits (666), Expect = 2e-73
Identities = 125/227 (55%), Positives = 168/227 (74%)
Frame = +1
Query: 94 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 273
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 274 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIAD 453
E V RK+ QY EVLE+ + K+ ENL+ N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125
Query: 454 IISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLADLVKKEHFILDSEYLT 633
II KQ+ QID DLKVKS YN LK L ++++K GSLLT++LADLVK + F+L+SEYL
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQ 185
Query: 634 TLLVIVPKSMFNDWNANYEKITDMIVPRSTQLVHQDNDYGLFTVTLF 774
T++V+VPK +W Y ++ M+VP S++L+ ++ ++ L+TVTLF
Sbjct: 186 TVIVVVPKISVKEWEQKYATLSSMVVPGSSKLLTEEGEHALYTVTLF 232
>AB009567-1|BAA75067.1| 384|Caenorhabditis elegans Vha11 protein
protein.
Length = 384
Score = 272 bits (666), Expect = 2e-73
Identities = 125/227 (55%), Positives = 168/227 (74%)
Frame = +1
Query: 94 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 273
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 274 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPTYLTRFQWDMAKYPIKQSLRNIAD 453
E V RK+ QY EVLE+ + K+ ENL+ N D+ TY+T+FQW+ AKYP+KQSL+ +++
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGNKDMKTYVTKFQWEGAKYPLKQSLKVLSE 125
Query: 454 IISKQVGQIDADLKVKSSAYNALKGNLHNLEKKQTGSLLTRNLADLVKKEHFILDSEYLT 633
II KQ+ QID DLKVKS YN LK L ++++K GSLLT++LADLVK + F+L+SEYL
Sbjct: 126 IIGKQISQIDNDLKVKSLTYNNLKNALASMDRKTVGSLLTKDLADLVKADDFVLNSEYLQ 185
Query: 634 TLLVIVPKSMFNDWNANYEKITDMIVPRSTQLVHQDNDYGLFTVTLF 774
T++V+VPK +W Y ++ M+VP S++L+ ++ ++ L+TVTLF
Sbjct: 186 TVIVVVPKISVKEWEQKYATLSSMVVPGSSKLLTEEGEHALYTVTLF 232
>AC024762-3|AAO91689.2| 133|Caenorhabditis elegans Vacuolar h
atpase protein 11, isoformb protein.
Length = 133
Score = 117 bits (282), Expect = 8e-27
Identities = 56/92 (60%), Positives = 65/92 (70%)
Frame = +1
Query: 94 EYWVISAPGDKTCQQTWDTLNNATKSGNLSVNYKFPIPDLKVGTLDQLVGLSDDLGKLDT 273
EYW+IS PG+K WD LN +T GN S N K+ IPDLKVGTLDQLVGLSDDL KLDT
Sbjct: 8 EYWLISVPGEKGANDAWDKLNRST--GNTSTNSKYLIPDLKVGTLDQLVGLSDDLSKLDT 65
Query: 274 FVEGVTRKVAQYLGEVLEDQRDKLHENLMANN 369
E V RK+ QY EVLE+ + K+ ENL+ N
Sbjct: 66 SAEAVIRKLVQYFTEVLEEDKSKIAENLVIGN 97
>Z68751-3|CAA92973.1| 760|Caenorhabditis elegans Hypothetical
protein T05E11.3 protein.
Length = 760
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +1
Query: 544 EKKQTGSLLTRNLADLVKKEHFILDSEYLTTLLVIVPKSMFNDWNANYEKITDMI 708
E KQ +T++ + + HF + E ++ VPK ND NY K+ + I
Sbjct: 333 EYKQFYKSITKDSEEPLSHVHFSAEGEVSFRSILYVPKKSPNDMFQNYGKVIENI 387
>Z46242-8|CAA86329.1| 301|Caenorhabditis elegans Hypothetical
protein F35G12.10 protein.
Length = 301
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +1
Query: 385 YLTRFQWDMAKYPIKQSLRNIADIISKQVGQIDADLKVKSSAYNALKG 528
YL + A++ Q L+ I D + KQV Q D K +A LKG
Sbjct: 251 YLKETEETKARFERDQLLKLINDSVEKQVSQKDFQEKFLQNAIQQLKG 298
>Z81575-7|CAB04638.1| 367|Caenorhabditis elegans Hypothetical
protein R08H2.8 protein.
Length = 367
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +1
Query: 217 VGTLDQLVGLSDDLGKLDTFVEGVTR 294
VG D + GL GKL+ F+ GVT+
Sbjct: 161 VGQYDYITGLEGSSGKLNVFMGGVTK 186
>AF063007-6|AAC16427.2| 523|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 4
protein.
Length = 523
Score = 28.3 bits (60), Expect = 6.4
Identities = 21/86 (24%), Positives = 37/86 (43%)
Frame = +3
Query: 513 QRSQRKPTQFREETDRELVDPQLGRSSQEGALHLGQRVPDHTPGHRAQVNVQRLECQLRE 692
Q Q+ P + R+ + + PQ+ + + +G R P P + L+ +R
Sbjct: 215 QSQQQPPLEMRQIPNPNQIPPQMVQGGPH-MVSVGAR-PMIRPMGPGGPSPMGLQGPVRG 272
Query: 693 DNGHDRAALHPARPPGQRLRTLHRHP 770
GH +HP PP Q+++ H P
Sbjct: 273 PMGHQMVQMHPP-PPPQQIQQQHPAP 297
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +3
Query: 432 ESAEYRRHHK-QTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGRS----SQ 596
E R+HH+ Q + ++ E Q Q+ +R+ Q R++ DR+ Q ++ SQ
Sbjct: 636 EQQHQRQHHQAQQAQQHQQQQERQQQERQQHERQ-QQERQQQDRQQQAQQHHQAQQHHSQ 694
Query: 597 EGALHLGQRVPDHTPGHRAQVNVQRLECQLREDNGHDRAALHPARPPGQRLRTLH 761
+ Q DH HR +RLE R + H R +R + LH
Sbjct: 695 QHPAQPAQPSQDHHEEHR-----RRLEEHRRREEEHHRRQEEESRARALQQSLLH 744
>Z92808-1|CAB07266.2| 606|Caenorhabditis elegans Hypothetical
protein M04C3.2 protein.
Length = 606
Score = 27.9 bits (59), Expect = 8.5
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 12/72 (16%)
Frame = +1
Query: 523 KGNLHNLEKKQT-GSLLTRNLADLVKKE---HFILDS-----EY---LTTLLVIVPKSMF 666
K NL EK+ G ++T + D++ KE F+LD EY + L++VP M
Sbjct: 234 KSNLAQREKEPVRGGIITTLIRDILIKETIIEFLLDQKNTSEEYGHSMGKTLLVVPPDMI 293
Query: 667 NDWNANYEKITD 702
W EK+ +
Sbjct: 294 ESWKKLLEKLLE 305
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 27.9 bits (59), Expect = 8.5
Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 5/115 (4%)
Frame = +3
Query: 432 ESAEYRRHHK-QTGRTDRRGSEGQVLRLQRSQRKPTQFREETDRELVDPQLGRS----SQ 596
E R+HH+ Q + ++ E Q Q+ +R+ Q R++ DR+ Q ++ SQ
Sbjct: 636 EQQHQRQHHQAQQAQQHQQQQERQQQERQQHERQ-QQERQQQDRQQQAQQHHQAQQHHSQ 694
Query: 597 EGALHLGQRVPDHTPGHRAQVNVQRLECQLREDNGHDRAALHPARPPGQRLRTLH 761
+ Q DH HR +RLE R + H R +R + LH
Sbjct: 695 QHPAQPAQPSQDHHEEHR-----RRLEEHRRREEEHHRRQEEESRARALQQSLLH 744
>Z82282-5|CAB05270.1| 555|Caenorhabditis elegans Hypothetical
protein T07G12.5 protein.
Length = 555
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Frame = +1
Query: 265 LDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLPT----YLTRFQWDMAKYPIKQ 432
LD G TR+ ++ E+ ED + + N LP+ + R+ W + P+
Sbjct: 467 LDNITGGATRRQRGFVSEIDEDDDVEEQATVEMNGYALPSKLNQFFLRYSW-LTYLPVIP 525
Query: 433 SLRNIADIISK 465
S R I +I K
Sbjct: 526 SEREIREIEEK 536
>Z82278-6|CAB05258.1| 690|Caenorhabditis elegans Hypothetical
protein M162.7 protein.
Length = 690
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/67 (22%), Positives = 30/67 (44%)
Frame = +1
Query: 202 IPDLKVGTLDQLVGLSDDLGKLDTFVEGVTRKVAQYLGEVLEDQRDKLHENLMANNSDLP 381
+ D+ + + +L+GL D K DTF+ +T + ++ ++ + N S L
Sbjct: 101 LKDISMESSKELIGLGSDAFKYDTFIHNLTSVRDSFKFPGKDEYYAEVESVMKFNMSKLE 160
Query: 382 TYLTRFQ 402
+ FQ
Sbjct: 161 DVMNEFQ 167
>Z50756-3|CAI79214.1| 305|Caenorhabditis elegans Hypothetical
protein T08D10.4 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Frame = -2
Query: 138 LLTGLVARGTDHPVFSHFHHKNLKINAVYNK-LSETANNFGETTR 7
+LT + + + V HFH K+LKI + NK + E N+ T+
Sbjct: 93 VLTSISSDLASNNVTEHFHDKSLKIEQMKNKTIRENDNSHNNQTQ 137
>AL117204-6|CAB55149.2| 833|Caenorhabditis elegans Hypothetical
protein Y116A8C.13 protein.
Length = 833
Score = 27.9 bits (59), Expect = 8.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +1
Query: 640 LVIVPKSMFNDWNANYEK 693
L+IVP S+ N+W A ++K
Sbjct: 270 LIIVPSSLVNNWKAEFDK 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,215,122
Number of Sequences: 27780
Number of extensions: 370919
Number of successful extensions: 1247
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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