Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16b09r
(466 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein pro... 154 2e-37
BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19 p... 154 2e-37
BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19 p... 154 2e-37
BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19 p... 154 2e-37
AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19 p... 154 2e-37
BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19 p... 153 4e-37
AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subun... 31 2.0
AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19 p... 31 2.0
>M81757-1|AAA89070.1| 145|Homo sapiens S19 ribosomal protein
protein.
Length = 145
Score = 154 bits (373), Expect = 2e-37
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = -1
Query: 436 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 257
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 256 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 117
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -2
Query: 168 HISAGHQAVLHARLCNRWRH*SLLRKFRXGGRILTTQGRRDLDRIAAQVRLKAKQ 4
H S G ++V R+ ++ K + GGR LT QG+RDLDRIA QV K+
Sbjct: 91 HFSRGSKSVAR-RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
>BC018616-1|AAH18616.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 154 bits (373), Expect = 2e-37
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = -1
Query: 436 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 257
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 256 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 117
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -2
Query: 168 HISAGHQAVLHARLCNRWRH*SLLRKFRXGGRILTTQGRRDLDRIAAQVRLKAKQ 4
H S G ++V R+ ++ K + GGR LT QG+RDLDRIA QV K+
Sbjct: 91 HFSRGSKSVAR-RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
>BC007615-1|AAH07615.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 154 bits (373), Expect = 2e-37
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = -1
Query: 436 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 257
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 256 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 117
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -2
Query: 168 HISAGHQAVLHARLCNRWRH*SLLRKFRXGGRILTTQGRRDLDRIAAQVRLKAKQ 4
H S G ++V R+ ++ K + GGR LT QG+RDLDRIA QV K+
Sbjct: 91 HFSRGSKSVAR-RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
>BC000023-1|AAH00023.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 154 bits (373), Expect = 2e-37
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = -1
Query: 436 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 257
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 256 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 117
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -2
Query: 168 HISAGHQAVLHARLCNRWRH*SLLRKFRXGGRILTTQGRRDLDRIAAQVRLKAKQ 4
H S G ++V R+ ++ K + GGR LT QG+RDLDRIA QV K+
Sbjct: 91 HFSRGSKSVAR-RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
>AF092907-1|AAD13668.1| 145|Homo sapiens ribosomal protein S19
protein.
Length = 145
Score = 154 bits (373), Expect = 2e-37
Identities = 71/117 (60%), Positives = 90/117 (76%)
Frame = -1
Query: 436 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAI 257
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 256 LRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 86
RH+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 61 ARHLYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 117
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -2
Query: 168 HISAGHQAVLHARLCNRWRH*SLLRKFRXGGRILTTQGRRDLDRIAAQVRLKAKQ 4
H S G ++V R+ ++ K + GGR LT QG+RDLDRIA QV K+
Sbjct: 91 HFSRGSKSVAR-RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 144
>BC017386-1|AAH17386.1| 157|Homo sapiens ribosomal protein S19
protein.
Length = 157
Score = 153 bits (370), Expect = 4e-37
Identities = 70/114 (61%), Positives = 89/114 (78%)
Frame = -1
Query: 427 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPYDPDWFYVRCAAILRH 248
VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAPYD +WFY R A+ RH
Sbjct: 16 VTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAASTARH 75
Query: 247 IYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKALQSLEALKLVEKVQ 86
+Y+R GV ++TKI+GGR+RNGV PSHF R S S+AR+ LQ+LE LK+VEK Q
Sbjct: 76 LYLRGGAGVGSMTKIYGGRQRNGVMPSHFSRGSKSVARRVLQALEGLKMVEKDQ 129
Score = 39.9 bits (89), Expect = 0.004
Identities = 23/55 (41%), Positives = 31/55 (56%)
Frame = -2
Query: 168 HISAGHQAVLHARLCNRWRH*SLLRKFRXGGRILTTQGRRDLDRIAAQVRLKAKQ 4
H S G ++V R+ ++ K + GGR LT QG+RDLDRIA QV K+
Sbjct: 103 HFSRGSKSVAR-RVLQALEGLKMVEKDQDGGRKLTPQGQRDLDRIAGQVAAANKK 156
>AB209470-1|BAD92707.1| 249|Homo sapiens proteasome beta 2 subunit
variant protein.
Length = 249
Score = 31.1 bits (67), Expect = 2.0
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -1
Query: 295 YDPDWFYVRCAAILRHIYIRSPVGVKTVTKIFGGRKRNGVTPSHFCRSSGSIARKAL 125
Y P R +LR P G + T + GGR+ G S CR G R+AL
Sbjct: 179 YTPTISRERAVELLRKCLEEGPGGAGSSTALGGGRRSVGQDRSSSCRRKGRGRRRAL 235
>AB007155-1|BAA28593.1| 18|Homo sapiens ribosomal protein S19
protein.
Length = 18
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 78 GRILTTQGRRDLDRIAAQ 25
GR LT QG+RDLDRIA Q
Sbjct: 1 GRKLTPQGQRDLDRIAGQ 18
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,813,007
Number of Sequences: 237096
Number of extensions: 1419215
Number of successful extensions: 3086
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3086
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3986009860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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