Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16b08f
         (478 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    28   4.0  
Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical pr...    27   7.0  
Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical pr...    27   9.2  

>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
           protein R10E11.1b protein.
          Length = 2056

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +3

Query: 81  MQRNTQSFVGGCSSPQNYNQGSRFGLNRPLPQNGSGFSPSPHMPQTYQP 227
           +  N  +  GG   P       + G  +P P N  GF+  P   Q  QP
Sbjct: 40  VDNNPSTSAGGSGGPSGSTPHPQ-GTPQPAPSNNGGFNLQPGQSQPQQP 87


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
           protein R10E11.1a protein.
          Length = 2045

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 14/49 (28%), Positives = 19/49 (38%)
 Frame = +3

Query: 81  MQRNTQSFVGGCSSPQNYNQGSRFGLNRPLPQNGSGFSPSPHMPQTYQP 227
           +  N  +  GG   P       + G  +P P N  GF+  P   Q  QP
Sbjct: 40  VDNNPSTSAGGSGGPSGSTPHPQ-GTPQPAPSNNGGFNLQPGQSQPQQP 87


>Z70781-7|CAJ55254.1|  380|Caenorhabditis elegans Hypothetical
           protein F57A8.2b protein.
          Length = 380

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 96  QSFVGGCSSPQNYNQG-SRFGLNRPLPQNGSGFSPSPHMPQTYQPHGCFMTASMIRKLSN 272
           QS+ GG  S Q+ NQG   +G   P      G+       Q+Y  +  F      + +S+
Sbjct: 38  QSYGGGYYSQQSSNQGFDGYGQQSPTQNQYGGYGQQQQQQQSYGQNNGFGGFQPQQLMSD 97

Query: 273 P 275
           P
Sbjct: 98  P 98


>Z70781-6|CAA94831.2|  349|Caenorhabditis elegans Hypothetical
           protein F57A8.2a protein.
          Length = 349

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
 Frame = +3

Query: 96  QSFVGGCSSPQNYNQG-SRFGLNRPLPQNGSGFSPSPHMPQTYQPHGCFMTASMIRKLSN 272
           QS+ GG  S Q+ NQG   +G   P      G+       Q+Y  +  F      + +S+
Sbjct: 38  QSYGGGYYSQQSSNQGFDGYGQQSPTQNQYGGYGQQQQQQQSYGQNNGFGGFQPQQLMSD 97

Query: 273 P 275
           P
Sbjct: 98  P 98


>Z69663-2|CAA93509.2|  819|Caenorhabditis elegans Hypothetical
           protein K02B9.2 protein.
          Length = 819

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 15/45 (33%), Positives = 20/45 (44%)
 Frame = +3

Query: 78  IMQRNTQSFVGGCSSPQNYNQGSRFGLNRPLPQNGSGFSPSPHMP 212
           I Q  T S  G  +S  N+  G     N+  P   S   P+PH+P
Sbjct: 608 IAQVETSSTAGPSNSSMNHGSG-----NQQFPVQQSSSRPAPHLP 647


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,695,556
Number of Sequences: 27780
Number of extensions: 198972
Number of successful extensions: 591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)