Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a24r
(797 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 28 0.12
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 27 0.27
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 25 1.1
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 24 1.4
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 24 1.9
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 24 1.9
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 2.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 2.5
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 23 3.3
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 5.7
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 5.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.7
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 5.7
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 7.6
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 27.9 bits (59), Expect = 0.12
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +2
Query: 539 PTLGTPLTAVLYRPLARPRQST 604
P +GTP T ++Y+P P Q++
Sbjct: 847 PVIGTPSTGMMYKPFLIPEQTS 868
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 26.6 bits (56), Expect = 0.27
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = -3
Query: 777 NNHQVITNGNVNSIRNSNYNGNLPLFVIVHGWNSNGN 667
+N+ IT GN N+ ++N N N +G N NGN
Sbjct: 223 SNNSTITAGNANTNASNNNNNNNNNNNNNNGANDNGN 259
Score = 25.0 bits (52), Expect = 0.81
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 777 NNHQVITNGNVNSIRNSNYNGNL 709
NN+ NGN N N+N NG++
Sbjct: 250 NNNGANDNGNGNGASNNNNNGDM 272
Score = 23.0 bits (47), Expect = 3.3
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = -3
Query: 789 DVTKNNHQVITNGNVNSIRNSNYNGN 712
+ + NN+ N N N+ N N NGN
Sbjct: 236 NASNNNNNNNNNNNNNNGANDNGNGN 261
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.1
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 777 NNHQVITNGNVNSIRNSNYNGN 712
NN+ N N N+ N+NYN N
Sbjct: 325 NNNNYKYNYNNNNYNNNNYNNN 346
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 361 TTPPGPSRIQTGNPVGSATSLSSS 432
TTP PSR Q+ + SA ++S+S
Sbjct: 530 TTPVLPSRFQSHPSIDSANTISNS 553
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 777 NNHQVITNGNVNSIRNSNYNGN 712
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 756 NGNVNSIRNSNYNGN 712
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.8 bits (49), Expect = 1.9
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 777 NNHQVITNGNVNSIRNSNYNGN 712
NN++ N N+ N+NYN N
Sbjct: 87 NNYKYSNYNNYNNNYNNNYNNN 108
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -3
Query: 756 NGNVNSIRNSNYNGN 712
N N N+ N+NYN N
Sbjct: 98 NNNYNNNYNNNYNNN 112
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 589 TTPVHNNNVAVGDGQQGGAD 648
+ P +N + GDG++GGA+
Sbjct: 1052 SNPSYNFSSVSGDGEEGGAE 1071
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.4 bits (48), Expect = 2.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +1
Query: 589 TTPVHNNNVAVGDGQQGGAD 648
+ P +N + GDG++GGA+
Sbjct: 1048 SNPSYNFSSVSGDGEEGGAE 1067
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 23.0 bits (47), Expect = 3.3
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 777 NNHQVITNGNVNSIRNSNYN 718
NN++ N N+ N+NYN
Sbjct: 320 NNYKYSNYNNYNNYNNNNYN 339
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 22.2 bits (45), Expect = 5.7
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +2
Query: 197 RL*EQVLTLQPGWGFLPPLG*KSP 268
R+ + LQPG F PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.7
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -3
Query: 714 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 538
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 537 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 451
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 22.2 bits (45), Expect = 5.7
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -3
Query: 756 NGNVNSIRNSNYNGNLPLF 700
N N N+ N+NYN L+
Sbjct: 335 NNNYNNYNNNNYNNYKKLY 353
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 5.7
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 5/93 (5%)
Frame = -3
Query: 714 NLPLFVIVHGWNSNGNSAVNTMIRPALLAVSDCNVIVVDWRGLANGLYNTAVNGVP-SVG 538
+LP+ +HG S + + L SD + +++R G +T VP ++G
Sbjct: 121 SLPVIFWIHGGAFQFGSGIPMGAK--YLMDSDVIFVTINYRLGILGFLSTEDEVVPGNMG 178
Query: 537 -QFLGNFLVWLINN---GGGNWGRVHLIGFSLG 451
+ L W+ N GGN R+ LIG S G
Sbjct: 179 LKDQSMALRWVSENIEWFGGNPKRITLIGLSAG 211
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 7.6
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 782 PKTTIKLLQMAMSTLSGTRTTMET 711
PK IKL + S L TT++T
Sbjct: 439 PKQPIKLFEQWKSILESGTTTLQT 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 258,519
Number of Sequences: 438
Number of extensions: 6752
Number of successful extensions: 36
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25246416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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