Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a20f
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41272-1|AAA82446.2|  584|Caenorhabditis elegans Hypothetical pr...    29   1.00 
Z70212-1|CAA94162.1|  406|Caenorhabditis elegans Hypothetical pr...    28   1.7  
AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm rece...    27   4.0  
AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical...    27   4.0  
U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpa...    26   9.3  
U58729-3|AAM54204.1|  955|Caenorhabditis elegans Hypothetical pr...    26   9.3  
U58729-2|AAM54203.1|  913|Caenorhabditis elegans Hypothetical pr...    26   9.3  
U58729-1|AAM54202.1|  928|Caenorhabditis elegans Hypothetical pr...    26   9.3  
CU457744-3|CAM36369.1|  247|Caenorhabditis elegans Hypothetical ...    26   9.3  
AF456360-1|AAL60231.1|  928|Caenorhabditis elegans immunoglobuli...    26   9.3  

>U41272-1|AAA82446.2|  584|Caenorhabditis elegans Hypothetical
           protein T03G11.4 protein.
          Length = 584

 Score = 29.1 bits (62), Expect = 1.00
 Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -2

Query: 173 CSWQQTRPSGDQDG-GRRMQTHAKRNG-TVSDLAQNGTGLVPELHHTNTSPQKHD 15
           C    T   G Q G  R+    A++ G T  ++  N TGL PE+ H N  P K D
Sbjct: 417 CFIAGTLSQGSQHGFPRKHLDMAEKIGETCHNMYDNPTGLGPEIAHFNMIPGKED 471


>Z70212-1|CAA94162.1|  406|Caenorhabditis elegans Hypothetical
           protein R04D3.2 protein.
          Length = 406

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 131 GRRMQTHAKRNGTVSDLAQNGTGLVPEL 48
           G+R++ HA+  GTV    QN TG+V  L
Sbjct: 90  GQRLRAHAELGGTVLVTEQNLTGVVESL 117


>AF016685-7|AAG24151.1|  341|Caenorhabditis elegans Seven tm
           receptor protein 86 protein.
          Length = 341

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +1

Query: 157 VCCQLQNGFVERYHVPIYLVLSNCKFCFNLSII 255
           V   L  G+V RY  PI+L+   C F F L ++
Sbjct: 71  VVFDLYEGYVSRYLAPIFLI-DFCAFYFTLILL 102


>AC025727-10|AAK66029.1|  707|Caenorhabditis elegans Hypothetical
           protein Y73E7A.8 protein.
          Length = 707

 Score = 27.1 bits (57), Expect = 4.0
 Identities = 18/55 (32%), Positives = 27/55 (49%)
 Frame = +1

Query: 121 IRRPPSWSPLGRVCCQLQNGFVERYHVPIYLVLSNCKFCFNLSIIA*WLNWNFSS 285
           +  PPSW+P GR+     NGF         L+ +N +  +  S+ A W  W+F S
Sbjct: 24  VTTPPSWAPTGRL--NQFNGFATPRP---SLLPANAQMVY-ASVWAAWSAWSFCS 72


>U88173-4|AAK21386.1|  126|Caenorhabditis elegans Vacuolar h atpase
           protein 10 protein.
          Length = 126

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = -2

Query: 155 RPSGDQDGGRRMQTHAKRNGTVSDLAQNGTGLVPELHHTNTSPQK 21
           R + DQ  G +      +   +  L Q    + PELHH  T  +K
Sbjct: 75  RDTEDQISGMKQSVAGNKQAVIVRLLQLVCDIKPELHHNLTLQKK 119


>U58729-3|AAM54204.1|  955|Caenorhabditis elegans Hypothetical
           protein F02G3.1c protein.
          Length = 955

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 84  PGTKWHWFSSG 52
           P  KWHWF +G
Sbjct: 533 PSPKWHWFKNG 543


>U58729-2|AAM54203.1|  913|Caenorhabditis elegans Hypothetical
           protein F02G3.1b protein.
          Length = 913

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 84  PGTKWHWFSSG 52
           P  KWHWF +G
Sbjct: 506 PSPKWHWFKNG 516


>U58729-1|AAM54202.1|  928|Caenorhabditis elegans Hypothetical
           protein F02G3.1a protein.
          Length = 928

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 84  PGTKWHWFSSG 52
           P  KWHWF +G
Sbjct: 506 PSPKWHWFKNG 516


>CU457744-3|CAM36369.1|  247|Caenorhabditis elegans Hypothetical
           protein T06A10.4 protein.
          Length = 247

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = -1

Query: 168 LAANTPQRRPRWRPTDADPRETQWDCIRPGTKWHWF 61
           +AA  P +   W     D  +T  +C  PG K+ WF
Sbjct: 168 VAAAEPPKMYCW--CQLDKNDTMIECENPGCKYGWF 201


>AF456360-1|AAL60231.1|  928|Caenorhabditis elegans immunoglobulin
           domain-containingprotein F02G3.1 protein.
          Length = 928

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 84  PGTKWHWFSSG 52
           P  KWHWF +G
Sbjct: 506 PSPKWHWFKNG 516


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,542,960
Number of Sequences: 27780
Number of extensions: 176413
Number of successful extensions: 438
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 431
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)