Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a16f
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 77 1e-14
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 59 3e-09
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 49 4e-06
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 1.2
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 29 2.7
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 4.8
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 4.8
Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical p... 28 8.4
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 8.4
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 8.4
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 28 8.4
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 28 8.4
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 77.0 bits (181), Expect = 1e-14
Identities = 59/195 (30%), Positives = 93/195 (47%), Gaps = 3/195 (1%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGD-ATG 257
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 258 RWRIRVGSTFANSGGVVHNVNRIIIHPNYNRRTADS-DLCILRSNSNIAYNNNVRPINIA 434
+ +RVG + SG H V + IHP YN S D I+R + + + RPI +
Sbjct: 109 SYSVRVGGHRSGSGS-PHRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICL- 166
Query: 435 GANYNLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANML 611
+ +N++ GWG+T G S ++ LR + V ++ C I R +ML
Sbjct: 167 -PSLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 612 CSGVLDVGGRDQCQG 656
C+G G D CQG
Sbjct: 226 CAG-YSYGKIDSCQG 239
Score = 35.9 bits (79), Expect = 0.032
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +1
Query: 646 SARGDSGGPLLHNR----VLVGVCSWGQYCADRRFPGV 747
S +GDSGGPL+ R L GV SWG CA PGV
Sbjct: 236 SCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGV 273
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 59.3 bits (137), Expect = 3e-09
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC-PYGDATGRWRI 269
R++GG T +P AAL N CG +IL++ +++AAHC + + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 270 RVG---STFANSGGVVHNVNRIIIHPNYNRRTADSDLCILR-SNSNIAYNNNVRPINIAG 437
VG + + + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 438 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 617
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 618 GVLDVGGRDQCQG 656
G L+ GG D CQG
Sbjct: 199 GYLE-GGIDSCQG 210
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/44 (45%), Positives = 25/44 (56%), Gaps = 5/44 (11%)
Frame = +1
Query: 646 SARGDSGGPLLHNR-----VLVGVCSWGQYCADRRFPGVNVRVS 762
S +GDSGGP R VL GV SWG CA ++ PG+ V+
Sbjct: 207 SCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVA 250
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 48.8 bits (111), Expect = 4e-06
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 11/187 (5%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 273 VGSTFANSGGVVHNVNRIIIHPNYNRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 452
V N+ +V IH YN +TAD+D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 453 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 599
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 600 ANMLCSG 620
+C+G
Sbjct: 212 GYQICAG 218
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 10/50 (20%)
Frame = +1
Query: 646 SARGDSGGPLLHNR-----VLVGVCSWGQYCAD-----RRFPGVNVRVSR 765
+A GDSGGPLL ++ V +G+ S+G D +FPGV R+S+
Sbjct: 224 TAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVYTRISK 273
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/60 (30%), Positives = 29/60 (48%)
Frame = -2
Query: 365 TVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVSTT 186
T ++T +I G +V T TV GT T PT + T ++GT ++ + +TT
Sbjct: 205 TTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGATT 264
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 29.5 bits (63), Expect = 2.7
Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 3/118 (2%)
Frame = -2
Query: 437 TSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNTPTVGKGGTNTNTPT 258
T++ T + IT EVT ++ V + T T T T TPT
Sbjct: 29 TADPTTTTTEATTTTEITTTTEEVTTTTEPVTTTTTPTTTSTTSTTTTTTPTTTTTTTPT 88
Query: 257 ACSVTVWTVSGTKDRSLVKDVSTTRXXXXXXXPCIQQSSYTGI---LVNVGRGATNNP 93
+ T T + T + +TT P ++ V++G G NNP
Sbjct: 89 TTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTTTTTMPPCNPNAVSLGMGDANNP 146
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/53 (33%), Positives = 23/53 (43%)
Frame = -2
Query: 764 RETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPLALVATTDVQNTRAQH 606
R +RT + +RRS +TP R RR PP S L DV +H
Sbjct: 100 RRSRTRSRDRRRSPPRRRDRRTPPRRSPGRRSPPRSRLPGPERRDVMPFNPRH 152
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 28.7 bits (61), Expect = 4.8
Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 2/104 (1%)
Frame = -2
Query: 500 ERCSTPTSSPNNLVITKIVIGTSNINRTNVV--VISYVGITA*DAEVTVSSTSVIVGMND 327
E T++P T I TS+ T+ V++ +T+ T +ST
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT------ 309
Query: 326 NSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 195
+ + TP+ T T+T T S + T+S TK + D+
Sbjct: 310 TTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 345 NRRTADSDLCILRSNSNIAYNNNVRPINIAGANYNL 452
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical
protein F36G9.15 protein.
Length = 109
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -2
Query: 743 PGKRRSAQYCPQEQT-PTRTRLWRRG 669
P K +SAQ CP QT P +T + R G
Sbjct: 53 PAKEKSAQTCPTAQTPPAKTPMERSG 78
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 120 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.4
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 183 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 296
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/89 (26%), Positives = 35/89 (39%)
Frame = -2
Query: 668 PPESPLALVATTDVQNTRAQHVSGDSTVNGSVTLDAGILIDGPDLDVTELLRIRPSERCS 489
PP++P + + + QN A SG++T D I D+ V E S S
Sbjct: 217 PPDAPNDYIDSEEAQNISASQESGETTDVLLELEDDNI----EDVQVEEYEETTKSPTVS 272
Query: 488 TPTSSPNNLVITKIVIGTSNINRTNVVVI 402
T TS P T N++R +I
Sbjct: 273 TSTSEPMAAAPITDAPKTENVSRNYTRII 301
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 27.9 bits (59), Expect = 8.4
Identities = 24/89 (26%), Positives = 35/89 (39%)
Frame = -2
Query: 668 PPESPLALVATTDVQNTRAQHVSGDSTVNGSVTLDAGILIDGPDLDVTELLRIRPSERCS 489
PP++P + + + QN A SG++T D I D+ V E S S
Sbjct: 167 PPDAPNDYIDSEEAQNISASQESGETTDVLLELEDDNI----EDVQVEEYEETTKSPTVS 222
Query: 488 TPTSSPNNLVITKIVIGTSNINRTNVVVI 402
T TS P T N++R +I
Sbjct: 223 TSTSEPMAAAPITDAPKTENVSRNYTRII 251
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,707,162
Number of Sequences: 27780
Number of extensions: 444169
Number of successful extensions: 1452
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1445
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -