Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a12r
         (856 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.7  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               23   3.6  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    22   6.3  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    22   6.3  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    22   6.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   8.3  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              22   8.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    22   8.3  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.3  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
 Frame = -1

Query: 847  TTCTTMSSRTNKEDSAVSPSVPIRSGLLPILRKIT-----QLLN*DGKLSLASTQNLYFL 683
            TTCTT++S+T +  S +SP +   +G++   + I       +   D K++ +S   L+ L
Sbjct: 1088 TTCTTLTSQTIR-ISWMSPPLSAANGVITGYKVIVIPSGGGIYTKDTKITSSSETILHGL 1146

Query: 682  KK 677
            KK
Sbjct: 1147 KK 1148


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 443 PEWPQSASYWLTLSPDSIYDTLT 375
           P+W Q  + WL  SP+  YD +T
Sbjct: 652 PKWLQVLALWLNHSPN--YDQVT 672


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -2

Query: 120 PPSHPAQVRLRLQGDLEKQGHRSIDLSSP 34
           PP+ PA++R   + + E   +R I +  P
Sbjct: 25  PPTRPARLRREAKPEAEPGNNRPIYIPQP 53


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 781 LALMVIPHCPPCLSLNSLLY 840
           L  +++P CP C   + ++Y
Sbjct: 345 LMYVIVPFCPDCCPSDRMVY 364


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 781 LALMVIPHCPPCLSLNSLLY 840
           L  +++P CP C   + ++Y
Sbjct: 345 LMYVIVPFCPDCCPSDRMVY 364


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 6/20 (30%), Positives = 12/20 (60%)
 Frame = +1

Query: 781 LALMVIPHCPPCLSLNSLLY 840
           L  +++P CP C   + ++Y
Sbjct: 345 LMYVIVPFCPDCCPSDRMVY 364


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 161 RCILPTIRSYP 193
           RC+L T+R YP
Sbjct: 402 RCLLETLRMYP 412


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 508 SKFLIALLYLYSLTSLWEITSPPN 437
           S FLI ++++YS  ++ ++T   N
Sbjct: 12  SIFLILIIFIYSNETIAQVTDDEN 35


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -1

Query: 508 SKFLIALLYLYSLTSLWEITSPPN 437
           S FLI ++++YS  ++ ++T   N
Sbjct: 12  SIFLILIIFIYSNETIAQVTDDEN 35


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.3
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -3

Query: 368 QKRYNDPIFYITENGWSSPPTNGLLDDDR 282
           +  YND  FY   NG +S  ++ L   ++
Sbjct: 135 ENNYNDNYFYSKSNGSNSSNSDVLFKQNK 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 245,095
Number of Sequences: 438
Number of extensions: 5818
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)