Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a12f
         (784 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...   296   2e-80
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...   296   2e-80

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score =  296 bits (727), Expect = 2e-80
 Identities = 128/249 (51%), Positives = 172/249 (69%)
 Frame = +3

Query: 12  MKFFLALGFLVVCCSALSTKQQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHN 191
           M+  L L  L   C      Q RRFP+DFL G  ++SYQIEG WN D KGE+IWD+LTH 
Sbjct: 2   MQIILPLFVLTASCLGSPVSQTRRFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHT 61

Query: 192 NPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVD 371
           +P  + D S GD++A+SYH  +RDV+M++EL +  YRFSLSW RI+P G+ N ++ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 372 YYNRLINEMLKYGITPMITLFHWDLPQKLQELGGFANPLASIWFEDYARVVYTNFGDRVK 551
           YY+ LI+E+L+Y ITPM+T++HW+LPQKLQELGG+ NP     F+DYAR+V   +GDRVK
Sbjct: 122 YYSNLIDELLRYNITPMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVK 181

Query: 552 HWITINEPREICYEGYGSVHKAPILNATAIGTYLCAKNVLIAHAKAYHLYNNEFKDKQGG 731
            W T+NEP  +C  GYG  + AP  N   I  YLC  N+L AHA+  H+Y   F+ +QGG
Sbjct: 182 IWTTVNEPWHVCEHGYGVDYMAPSYNYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGG 241

Query: 732 QCGITISAN 758
           + GIT+  +
Sbjct: 242 RMGITLDTS 250


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score =  296 bits (727), Expect = 2e-80
 Identities = 128/249 (51%), Positives = 172/249 (69%)
 Frame = +3

Query: 12  MKFFLALGFLVVCCSALSTKQQRRFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHN 191
           M+  L L  L   C      Q RRFP+DFL G  ++SYQIEG WN D KGE+IWD+LTH 
Sbjct: 2   MQIILPLFVLTASCLGSPVSQTRRFPNDFLWGVGSSSYQIEGGWNADDKGESIWDFLTHT 61

Query: 192 NPAAVKDGSTGDIAANSYHNVERDVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVD 371
           +P  + D S GD++A+SYH  +RDV+M++EL +  YRFSLSW RI+P G+ N ++ AG+ 
Sbjct: 62  HPEKIVDRSNGDVSADSYHQWKRDVQMVKELHVGTYRFSLSWPRIMPGGYMNHVSTAGIK 121

Query: 372 YYNRLINEMLKYGITPMITLFHWDLPQKLQELGGFANPLASIWFEDYARVVYTNFGDRVK 551
           YY+ LI+E+L+Y ITPM+T++HW+LPQKLQELGG+ NP     F+DYAR+V   +GDRVK
Sbjct: 122 YYSNLIDELLRYNITPMVTIYHWELPQKLQELGGWTNPEIIPLFKDYARLVLEMYGDRVK 181

Query: 552 HWITINEPREICYEGYGSVHKAPILNATAIGTYLCAKNVLIAHAKAYHLYNNEFKDKQGG 731
            W T+NEP  +C  GYG  + AP  N   I  YLC  N+L AHA+  H+Y   F+ +QGG
Sbjct: 182 IWTTVNEPWHVCEHGYGVDYMAPSYNYPGIPAYLCGHNLLKAHAEVVHMYRELFQPRQGG 241

Query: 732 QCGITISAN 758
           + GIT+  +
Sbjct: 242 RMGITLDTS 250


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,793,905
Number of Sequences: 53049
Number of extensions: 702441
Number of successful extensions: 2334
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2334
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3613676352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)