Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a12f
         (784 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical pr...   158   5e-39
AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical ...   152   3e-37
AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical...    30   1.6  
Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical pr...    29   3.7  
U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical pr...    29   5.0  
Z73424-6|CAI06058.1|  326|Caenorhabditis elegans Hypothetical pr...    28   8.7  

>U41557-9|AAA83309.1|  479|Caenorhabditis elegans Hypothetical
           protein C50F7.10 protein.
          Length = 479

 Score =  158 bits (383), Expect = 5e-39
 Identities = 87/233 (37%), Positives = 126/233 (54%), Gaps = 11/233 (4%)
 Frame = +3

Query: 81  RFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 260
           +FP +F + TATA+YQIEGA N DG+G + WD +   N   + D S  D++       + 
Sbjct: 6   KFPKNFQLATATAAYQIEGAKNLDGRGFSTWDSIRSEN-GRIHDNSDPDLSCEGRLKYKE 64

Query: 261 DVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVDYYNRLINEMLKYGITPMITLFHW 440
           DV ++ ++G+  YRFS+SWSRILP G    INE G+ +Y  +   +   GI P++TLFH+
Sbjct: 65  DVALLSKIGVTSYRFSISWSRILPDGTLKTINEDGIQFYRDICLLLRDNGIEPIVTLFHF 124

Query: 441 DLPQKLQELG-GFANPLASIWFEDYARVVYTNFGDRVKHWITINEPREICYEGYGSVHK- 614
           D+P  + + G  + N      FE +A + +  FGD VK WIT N   EI  + + SV K 
Sbjct: 125 DMPLSIYDNGTSWLNKENCEHFEKFADLCFQKFGDLVKTWITFN---EINMQAWSSVVKI 181

Query: 615 ---------APILNATAIGTYLCAKNVLIAHAKAYHLYNNEFKDKQGGQCGIT 746
                     P +       Y+ A N+L+ HAK Y  Y   +K+ Q G  GIT
Sbjct: 182 EGELWLCPDRPEIENHEQAPYIAATNMLLTHAKIYRNYQKNYKETQNGLIGIT 234


>AF099915-3|AAC68766.1|  475|Caenorhabditis elegans Hypothetical
           protein E02H9.5 protein.
          Length = 475

 Score =  152 bits (368), Expect = 3e-37
 Identities = 86/233 (36%), Positives = 128/233 (54%), Gaps = 11/233 (4%)
 Frame = +3

Query: 81  RFPDDFLIGTATASYQIEGAWNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 260
           +FP +F + TATA+YQIEGA + +G+G + WD +    P  + D S  D++ +     + 
Sbjct: 6   KFPKNFKLATATAAYQIEGAKDLNGRGFSTWDAI-RLEPGRILDNSDPDLSCDGLLKYKE 64

Query: 261 DVEMMRELGLDVYRFSLSWSRILPSGFANEINEAGVDYYNRLINEMLKYGITPMITLFHW 440
           DV ++ E+G+  YRFS+SWSRILP G  + INE G+ +Y  L   + +  I P++TLFH+
Sbjct: 65  DVALLAEIGVTNYRFSISWSRILPDGTLSTINEEGIKFYRDLCLLLKENNIEPVVTLFHF 124

Query: 441 DLPQKLQELG-GFANPLASIWFEDYARVVYTNFGDRVKHWITINEPREICYEGYGSVHKA 617
           D+P  + + G  + N      FE +A + +  FGD VK WIT N   EI  + +GS+ K 
Sbjct: 125 DMPLAIYDNGTAWLNRENCEHFEKFADLCFQKFGDLVKTWITYN---EINCQAWGSIVKV 181

Query: 618 ----------PILNATAIGTYLCAKNVLIAHAKAYHLYNNEFKDKQGGQCGIT 746
                     P +       Y  A N+L+ HAK Y  Y+  +K  Q G  GIT
Sbjct: 182 EGEFWLCPERPEIENHKQAPYFGAANMLLTHAKIYRNYDQNYKPTQHGILGIT 234


>AL132904-15|CAC35848.2|  518|Caenorhabditis elegans Hypothetical
           protein Y111B2A.19 protein.
          Length = 518

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = +3

Query: 117 ASYQIEGA--WNEDGKGENIWDYLTHNNPAAVKDGSTGDIAANSYHNVER 260
           A YQ++    W+ D   E++ D L+H NP  + D        N  H + R
Sbjct: 459 ALYQMDAPDNWHHDDPSEDLDDLLSHENPETLDDTMRNSNTDNDLHLILR 508


>Z69884-4|CAA93751.2|  913|Caenorhabditis elegans Hypothetical
           protein F31F6.5 protein.
          Length = 913

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -3

Query: 551 FDSVTEIRVDHARVVFKPNGSQWIGEASQF 462
           F  +TE+RVD    VF P+ ++W  E S F
Sbjct: 43  FFRMTELRVDDPSYVFTPSDARWRREISVF 72


>U61949-6|AAB03154.1|  166|Caenorhabditis elegans Hypothetical
           protein F49E8.6 protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 5.0
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = +1

Query: 43  WCAAPHYRPSSREGFRMTSSSGLPPPPT 126
           +CA P    SS      TSS  LPPPPT
Sbjct: 126 YCAPPPGPSSSAPPTLPTSSGNLPPPPT 153


>Z73424-6|CAI06058.1|  326|Caenorhabditis elegans Hypothetical
           protein C44B9.6 protein.
          Length = 326

 Score = 27.9 bits (59), Expect = 8.7
 Identities = 20/65 (30%), Positives = 28/65 (43%)
 Frame = +3

Query: 408 GITPMITLFHWDLPQKLQELGGFANPLASIWFEDYARVVYTNFGDRVKHWITINEPREIC 587
           G T  + LFH  LPQ  Q+     N L+ I ++         F   V  W   +  RE+ 
Sbjct: 220 GSTERLELFHMRLPQNFQKEEFIQNALSGIKYKKLDVDQKLEFEAAVDVW--KDSHREVK 277

Query: 588 YEGYG 602
            EG+G
Sbjct: 278 NEGFG 282


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,433,952
Number of Sequences: 27780
Number of extensions: 348609
Number of successful extensions: 1057
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1003
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1050
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1893203640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)