Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a08r
         (813 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical pr...   336   1e-92
Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical pr...   336   1e-92
Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical pr...   324   6e-89
Z93389-6|CAB07669.2|  300|Caenorhabditis elegans Hypothetical pr...    29   4.0  

>Z68318-8|CAH10783.1|  465|Caenorhabditis elegans Hypothetical
           protein T21B10.2c protein.
          Length = 465

 Score =  336 bits (826), Expect = 1e-92
 Identities = 155/206 (75%), Positives = 175/206 (84%)
 Frame = -2

Query: 812 IQDAIQKAGYAGKIDIGMDVAASEFFKDGKYDLDFKNPDSNPGDYLSSDKLADVYLDFIK 633
           +  AI KAGY GKI IGMDVAASEFFKDGKYDLDFKNP S+   +LS ++L ++Y  FIK
Sbjct: 258 LNTAIDKAGYTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIK 317

Query: 632 DFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVN 453
           ++P+VSIED FDQDDW  W    G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVN
Sbjct: 318 EYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVN 377

Query: 452 QIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLA 273
           QIGSVTESI+A  L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERLA
Sbjct: 378 QIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERLA 437

Query: 272 KYNQILRIEEELGVNAKYAGKNFRRP 195
           KYNQ+LRIEEELG +A YAG NFR P
Sbjct: 438 KYNQLLRIEEELGADAVYAGHNFRNP 463


>Z68318-2|CAA92692.1|  434|Caenorhabditis elegans Hypothetical
           protein T21B10.2a protein.
          Length = 434

 Score =  336 bits (826), Expect = 1e-92
 Identities = 155/206 (75%), Positives = 175/206 (84%)
 Frame = -2

Query: 812 IQDAIQKAGYAGKIDIGMDVAASEFFKDGKYDLDFKNPDSNPGDYLSSDKLADVYLDFIK 633
           +  AI KAGY GKI IGMDVAASEFFKDGKYDLDFKNP S+   +LS ++L ++Y  FIK
Sbjct: 227 LNTAIDKAGYTGKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIK 286

Query: 632 DFPMVSIEDPFDQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVN 453
           ++P+VSIED FDQDDW  W    G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVN
Sbjct: 287 EYPVVSIEDAFDQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVN 346

Query: 452 QIGSVTESIDAHLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLA 273
           QIGSVTESI+A  L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERLA
Sbjct: 347 QIGSVTESIEAAKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERLA 406

Query: 272 KYNQILRIEEELGVNAKYAGKNFRRP 195
           KYNQ+LRIEEELG +A YAG NFR P
Sbjct: 407 KYNQLLRIEEELGADAVYAGHNFRNP 432


>Z68318-3|CAD57704.1|  337|Caenorhabditis elegans Hypothetical
           protein T21B10.2b protein.
          Length = 337

 Score =  324 bits (795), Expect = 6e-89
 Identities = 149/195 (76%), Positives = 168/195 (86%)
 Frame = -2

Query: 779 GKIDIGMDVAASEFFKDGKYDLDFKNPDSNPGDYLSSDKLADVYLDFIKDFPMVSIEDPF 600
           GKI IGMDVAASEFFKDGKYDLDFKNP S+   +LS ++L ++Y  FIK++P+VSIED F
Sbjct: 141 GKISIGMDVAASEFFKDGKYDLDFKNPASDSSKWLSGEQLTELYQSFIKEYPVVSIEDAF 200

Query: 599 DQDDWSAWANLTGRTPIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDA 420
           DQDDW  W    G T IQ+VGDDLTVTNPKRI TA++KK+CNCLLLKVNQIGSVTESI+A
Sbjct: 201 DQDDWDNWGKFHGATSIQLVGDDLTVTNPKRIQTAIDKKSCNCLLLKVNQIGSVTESIEA 260

Query: 419 HLLAKKNGWGTMVSHRSGETEDTFIADLVVGLSTGQIKTGAPCRSERLAKYNQILRIEEE 240
             L++ NGWG MVSHRSGETEDTFIADLVVGL+TGQIKTGAPCRSERLAKYNQ+LRIEEE
Sbjct: 261 AKLSRANGWGVMVSHRSGETEDTFIADLVVGLATGQIKTGAPCRSERLAKYNQLLRIEEE 320

Query: 239 LGVNAKYAGKNFRRP 195
           LG +A YAG NFR P
Sbjct: 321 LGADAVYAGHNFRNP 335


>Z93389-6|CAB07669.2|  300|Caenorhabditis elegans Hypothetical
           protein T13F3.5 protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 14/51 (27%), Positives = 26/51 (50%)
 Frame = -2

Query: 554 PIQIVGDDLTVTNPKRIATAVEKKACNCLLLKVNQIGSVTESIDAHLLAKK 402
           P+++    L    P  I     +K C CL   V+++G+   SI  H+L+++
Sbjct: 14  PLEVANQILEKLEP--IYQLTSRKVCKCLKTSVDKLGTHFYSITFHILSRE 62


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,694,944
Number of Sequences: 27780
Number of extensions: 398130
Number of successful extensions: 952
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)