Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a07r
(791 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 108 5e-24
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 98 7e-21
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 74 1e-13
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 0.94
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 30 2.2
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 3.8
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 3.8
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 3.8
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 29 5.0
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 5.0
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.7
Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical p... 28 8.8
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 8.8
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 8.8
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 8.8
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 8.8
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 108 bits (259), Expect = 5e-24
Identities = 79/240 (32%), Positives = 117/240 (48%), Gaps = 7/240 (2%)
Frame = -3
Query: 711 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR 532
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 531 -WRIRVGSTFANSGGVVHNVNRIIIHPNYNRR-TADIDLCILRSNSNIAYNNNVRPINIA 358
+ +RVG + SG H V + IHP YN + D I+R + + + RPI +
Sbjct: 109 SYSVRVGGHRSGSGSP-HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLP 167
Query: 357 GANYNLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANML 181
+ +N++ GWG+T G S ++ LR + V ++ C I R +ML
Sbjct: 168 --SLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 180 CSGVLDVGGRDQCQGDSGGPLLHNR----VLVGVCSWGQYCADRRFPGVNVRVSRFTSWI 13
C+G G D CQGDSGGPL+ R L GV SWG CA PGV V ++WI
Sbjct: 226 CAGY-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTWI 284
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 97.9 bits (233), Expect = 7e-21
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 10/241 (4%)
Frame = -3
Query: 699 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWRI 523
R++GG T +P AAL N CG +IL++ +++AAHC D + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 522 RVGSTFANS---GGVVHNVNRIIIHPNYNRRTADIDLCILR-SNSNIAYNNNVRPINIAG 355
VG N + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 354 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 175
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 174 GVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCADRRFPGVNVRVSRFTSWIQ 10
G L+ GG D CQGDSGGP R VL GV SWG CA ++ PG+ V+ + SWI
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSWIS 257
Query: 9 S 7
+
Sbjct: 258 A 258
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 73.7 bits (173), Expect = 1e-13
Identities = 75/251 (29%), Positives = 120/251 (47%), Gaps = 21/251 (8%)
Frame = -3
Query: 699 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 520
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 519 VGSTFANSGGVVHNVNRIIIHPNYNRRTADIDLCILRSNSNIAYNNNVRPINIAGANYNL 340
V N+ +V IH YN +TAD D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 339 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 193
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 192 ANMLCSGVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCAD-----RRFPGVN 43
+C+G G GDSGGPLL ++ V +G+ S+G D +FPGV
Sbjct: 212 GYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVY 268
Query: 42 VRVSRFTSWIQ 10
R+S++ WIQ
Sbjct: 269 TRISKYVPWIQ 279
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 31.1 bits (67), Expect = 0.94
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 424 VNVSSTSVIV-GMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVS 600
+N ++T+V++ G +V T TV GT T PT + T ++GT ++ + +
Sbjct: 203 MNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGA 262
Query: 601 TT 606
TT
Sbjct: 263 TT 264
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = +2
Query: 50 PGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEHNMLAVIA 202
P K+R+ + P++ P + + R + PW S P + P + V A
Sbjct: 109 PEKKRAVEPTPKQAAPIKEKSKSRESKKEPWKTSTAPAATAPVTETVTVAA 159
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 23 VKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 181
+KR TR L P K+ Q+ R R + PP+SP TS P+H
Sbjct: 1493 LKRRTRELDPEKKGDKTNIVQD---LRARFEMKSPPKSPPKDDEEGTSTDPKH 1542
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.1 bits (62), Expect = 3.8
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = +2
Query: 23 VKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 181
+KR TR L P K+ Q+ R R + PP+SP TS P+H
Sbjct: 1669 LKRRTRELDPEKKGDKTNIVQD---LRARFEMKSPPKSPPKDDEEGTSTDPKH 1718
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = -3
Query: 447 NRRTADIDLCILRSNSNIAYNNNVRPINIAGANYNL 340
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 28.7 bits (61), Expect = 5.0
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = +1
Query: 298 CSTPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVNVSSTSVIVGMNDNSVH 477
C S P+ + + N+TN V+ V +TA A+ N + I+G++
Sbjct: 377 CRLHKSMPSEEQFLSVQMNVRENNKTNQVMSDVVVVTAPPAQTNPKFSLKILGLDSTEAD 436
Query: 478 VMH 486
+H
Sbjct: 437 TVH 439
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 5.0
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 18 KR*NGKRER*HQGSDGQRSTVPKSR-HQRGRGCGGEDHRSHPGTGRDHRRPK 170
KR + +G+D +RST H+ R HR H G R+HR K
Sbjct: 259 KRKRSRSRSTDRGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHK 310
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +3
Query: 42 R*HQGSDGQRSTVPKSRHQRGRGCGGEDHRS-HPGTGRDHRRPKH 173
R H G G RS P RH G G GG RS PG H H
Sbjct: 236 RGHGGRHGSRSGSPGGRHGHG-GHGGHGSRSGSPGGRHGHGGSGH 279
>Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical
protein F36G9.15 protein.
Length = 109
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = +2
Query: 50 PGKRRSAQYCPQEQT-PTRTRLWRRG 124
P K +SAQ CP QT P +T + R G
Sbjct: 53 PAKEKSAQTCPTAQTPPAKTPMERSG 78
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.9 bits (59), Expect = 8.8
Identities = 24/102 (23%), Positives = 37/102 (36%)
Frame = +1
Query: 292 ERCSTPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVNVSSTSVIVGMNDNS 471
E T++P T I TS+ T+ T +STS +
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT----TT 311
Query: 472 VHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 597
+ TP+ T T+T T S + T+S TK + D+
Sbjct: 312 TTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.8
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 672 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 556
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -3
Query: 609 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 496
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +2
Query: 26 KRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPES 136
+R +RT + +RRS +TP R RR PP S
Sbjct: 99 RRRSRTRSRDRRRSPPRRRDRRTPPRRSPGRRSPPRS 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.128 0.366
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,371,454
Number of Sequences: 27780
Number of extensions: 461169
Number of successful extensions: 1142
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1924757034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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