Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a07f
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like p... 106 2e-23
U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like p... 96 3e-20
U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like pr... 70 2e-12
AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed ... 31 0.92
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 30 2.1
U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of ... 29 3.7
U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of ... 29 3.7
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl... 29 3.7
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 29 4.9
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 4.9
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical p... 28 8.6
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 8.6
U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like pr... 28 8.6
AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like ... 28 8.6
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 28 8.6
>U29380-14|AAA68746.2| 293|Caenorhabditis elegans Trypsin-like
protease protein 1 protein.
Length = 293
Score = 106 bits (255), Expect = 2e-23
Identities = 78/239 (32%), Positives = 116/239 (48%), Gaps = 7/239 (2%)
Frame = +3
Query: 81 TNPQRIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGR 260
T R+IGGS ++ + +P LL ++ CGG++++ +L+AAHC D
Sbjct: 53 TLDHRLIGGSESSPHSWPWTVQLLSRLGHHR----CGGSLIDPNFVLTAAHCFAKDRRPT 108
Query: 261 -WRIRVGSTFANSGGVVHNVNRIIIHPNYNRR-TADIDLCILRSNSNIAYNNNVRPINIA 434
+ +RVG + SG H V + IHP YN + D I+R + + + RPI +
Sbjct: 109 SYSVRVGGHRSGSGSP-HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLP 167
Query: 435 GANYNLGDNQVVWAAGWGATSLGGS-NSEQLRHVQVWTINQNACVQRYRPINRAITANML 611
+ +N++ GWG+T G S ++ LR + V ++ C I R +ML
Sbjct: 168 --SLPAVENRLCVVTGWGSTIEGSSLSAPTLREIHVPLLSTLFCSSLPNYIGRIHLPSML 225
Query: 612 CSGVLDVGGRDQCQGDSGGPLLHNR----VLVGVCSWGQYCADRRFPGVNVRVSRFTSW 776
C+G G D CQGDSGGPL+ R L GV SWG CA PGV V ++W
Sbjct: 226 CAGY-SYGKIDSCQGDSGGPLMCARDGHWELTGVVSWGIGCARPGMPGVYGNVHSASTW 283
>U58751-11|AAB00662.1| 265|Caenorhabditis elegans Trypsin-like
protease protein 2 protein.
Length = 265
Score = 95.9 bits (228), Expect = 3e-20
Identities = 73/238 (30%), Positives = 114/238 (47%), Gaps = 10/238 (4%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDA-TGRWRI 269
R++GG T +P AAL N CG +IL++ +++AAHC D + +
Sbjct: 26 RVVGGFETVPGAFPWTAALR---NKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEV 82
Query: 270 RVGSTFANS---GGVVHNVNRIIIHPNYNRRTADIDLCILR-SNSNIAYNNNVRPINIAG 437
VG N + + RI +P Y + D+ IL I +N +PI +
Sbjct: 83 VVGDWDNNQTDGNEQIFYLQRIHFYPLY-KDIFSHDIAILEIPYPGIEFNEYAQPICLPS 141
Query: 438 ANYNLGDNQVVWAAGWGATSLGGSNSEQLRHVQVWTINQNACVQRYRPINRAITANMLCS 617
++ + +GWG S+G +E+L+ + IN+ CV + I +++ + C+
Sbjct: 142 KDFVYTPGRQCVVSGWG--SMGLRYAERLQAALIPIINRFDCVNSSQ-IYSSMSRSAFCA 198
Query: 618 GVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCADRRFPGVNVRVSRFTSW 776
G L+ GG D CQGDSGGP R VL GV SWG CA ++ PG+ V+ + SW
Sbjct: 199 GYLE-GGIDSCQGDSGGPFACRREDGAFVLAGVISWGDGCAQKKQPGIYTMVAPYLSW 255
>U70848-2|AAB09110.4| 313|Caenorhabditis elegans Trypsin-like
protease protein 3 protein.
Length = 313
Score = 70.1 bits (164), Expect = 2e-12
Identities = 73/249 (29%), Positives = 118/249 (47%), Gaps = 21/249 (8%)
Frame = +3
Query: 93 RIIGGSTTNINQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHCPYGDATGRWRIR 272
RIIGG++ I+ A L ++ N CG +++ +++AAHC T R +
Sbjct: 37 RIIGGNS--IDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQLQT-RSFVY 93
Query: 273 VGSTFANSGGVVHNVNRIIIHPNYNRRTADIDLCILRSNSNIAYNNNVRPINIAGANYNL 452
V N+ +V IH YN +TAD D+ +LR +S+++ ++P+ + + L
Sbjct: 94 VREP-KNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDSKL 151
Query: 453 ---GDNQVVWAAG--WGATSLGGS---NSEQLRHVQVWTINQNACVQRYR---PINRAIT 599
N VV G G S G NS+ L+ V I+ + CV+ +R ++ IT
Sbjct: 152 LKQYKNGVVIGYGLTLGEDSSGEPKLINSQTLQSTSVPIISDDDCVKTWRFLSLLSVKIT 211
Query: 600 ANMLCSGVLDVGGRDQCQGDSGGPLLHNR-----VLVGVCSWGQYCAD-----RRFPGVN 749
+C+G G GDSGGPLL ++ V +G+ S+G D +FPGV
Sbjct: 212 GYQICAGAYLHG---TAPGDSGGPLLIHKSNGEYVQIGITSYGADGLDGVIDQGKFPGVY 268
Query: 750 VRVSRFTSW 776
R+S++ W
Sbjct: 269 TRISKYVPW 277
>AF039047-13|AAM15587.1| 402|Caenorhabditis elegans Coexpressed
with polycystins protein4 protein.
Length = 402
Score = 31.1 bits (67), Expect = 0.92
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = -2
Query: 368 VNVSSTSVIV-GMNDNSVHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDVS 192
+N ++T+V++ G +V T TV GT T PT + T ++GT ++ + +
Sbjct: 203 MNTTTTTVLINGTTTTTVPTNETTTTVPLNGTTTTVPTNETTTTSPLNGTTTTTVPINGA 262
Query: 191 TT 186
TT
Sbjct: 263 TT 264
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/51 (25%), Positives = 23/51 (45%)
Frame = -3
Query: 742 PGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEHNMLAVIA 590
P K+R+ + P++ P + + R + PW S P + P + V A
Sbjct: 109 PEKKRAVEPTPKQAAPIKEKSKSRESKKEPWKTSTAPAATAPVTETVTVAA 159
>U53150-6|ABB51187.1| 1544|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform a protein.
Length = 1544
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 769 VKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 611
+KR TR L P K+ Q+ R R + PP+SP TS P+H
Sbjct: 1493 LKRRTRELDPEKKGDKTNIVQD---LRARFEMKSPPKSPPKDDEEGTSTDPKH 1542
>U53150-5|ABB51188.1| 1720|Caenorhabditis elegans Twik family of
potassium channelsprotein 11, isoform b protein.
Length = 1720
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/53 (33%), Positives = 24/53 (45%)
Frame = -3
Query: 769 VKRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPESPWHWSRPPTSKTPEH 611
+KR TR L P K+ Q+ R R + PP+SP TS P+H
Sbjct: 1669 LKRRTRELDPEKKGDKTNIVQD---LRARFEMKSPPKSPPKDDEEGTSTDPKH 1718
>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
protein 2 protein.
Length = 1080
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 345 NRRTADIDLCILRSNSNIAYNNNVRPINIAGANYNL 452
N AD D L ++ YNNN+R N+A N NL
Sbjct: 913 NESEADYDDIYLEKQNSGKYNNNIRHGNMAFRNANL 948
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/63 (23%), Positives = 27/63 (42%)
Frame = -2
Query: 494 CSTPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVNVSSTSVIVGMNDNSVH 315
C S P+ + + N+TN V+ V +TA A+ N + I+G++
Sbjct: 377 CRLHKSMPSEEQFLSVQMNVRENNKTNQVMSDVVVVTAPPAQTNPKFSLKILGLDSTEAD 436
Query: 314 VMH 306
+H
Sbjct: 437 TVH 439
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = -1
Query: 774 KR*NGKRER*HQGSDGQRSTVPKSR-HQRGRGCGGEDHRSHPGTGRDHRRPK 622
KR + +G+D +RST H+ R HR H G R+HR K
Sbjct: 259 KRKRSRSRSTDRGADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHK 310
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = -1
Query: 750 R*HQGSDGQRSTVPKSRHQRGRGCGGEDHRS-HPGTGRDHRRPKH 619
R H G G RS P RH G G GG RS PG H H
Sbjct: 236 RGHGGRHGSRSGSPGGRHGHG-GHGGHGSRSGSPGGRHGHGGSGH 279
>Z81533-10|CAB04329.1| 109|Caenorhabditis elegans Hypothetical
protein F36G9.15 protein.
Length = 109
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -3
Query: 742 PGKRRSAQYCPQEQT-PTRTRLWRRG 668
P K +SAQ CP QT P +T + R G
Sbjct: 53 PAKEKSAQTCPTAQTPPAKTPMERSG 78
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.9 bits (59), Expect = 8.6
Identities = 24/102 (23%), Positives = 37/102 (36%)
Frame = -2
Query: 500 ERCSTPTSSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVNVSSTSVIVGMNDNS 321
E T++P T I TS+ T+ T +STS +
Sbjct: 256 ETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPT----TT 311
Query: 320 VHVMHNTPTVGKGGTNTNTPTACSVTVWTVSGTKDRSLVKDV 195
+ TP+ T T+T T S + T+S TK + D+
Sbjct: 312 TTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
>U97408-1|AAB93344.2| 360|Caenorhabditis elegans Trypsin-like
protease protein 6 protein.
Length = 360
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 120 INQYPGIAALLYTWNWNQWWQSCGGNILNQRSILSAAHC 236
IN Y + + TW+ + C G + + R IL+A HC
Sbjct: 58 INTYTNVKNIDETWS-----KHCSGTLTSPRHILTATHC 91
>AF003134-1|AAB54144.1| 522|Caenorhabditis elegans Trypsin-like
protease protein 7 protein.
Length = 522
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +3
Query: 183 SCGGNILNQRSILSAAHCPYG-DATGRWRIRVGSTFANS 296
+C G I++ R IL A HC G + G W + + TF S
Sbjct: 192 TCTGTIVSPRHILIATHCFAGQNRDGSWNL-IEDTFDRS 229
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 766 KRETRTLTPGKRRSAQYCPQEQTPTRTRLWRRGPPES 656
+R +RT + +RRS +TP R RR PP S
Sbjct: 99 RRRSRTRSRDRRRSPPRRRDRRTPPRRSPGRRSPPRS 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,857,431
Number of Sequences: 27780
Number of extensions: 450844
Number of successful extensions: 1468
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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