Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a05r
(914 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 39 0.001
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 30 0.40
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 29 0.70
SPCC622.06c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 29 0.70
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 28 1.6
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 28 1.6
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 27 2.8
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 24 4.5
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 24 4.5
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 24 4.5
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 24 4.5
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 24 4.5
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 24 4.5
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 24 5.8
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 24 5.8
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 24 5.8
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 24 5.8
SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 6.5
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 38.7 bits (86), Expect = 0.001
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = -1
Query: 911 RDGFLDLTEVKRMMERLGAXQTHLGLKAMISEVDEDGDNKISFREFL-LIYRKAR 750
+DG + E+ +M LG T L+ MI+EVD DG+ I F EFL ++ RK +
Sbjct: 25 QDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMK 79
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = -1
Query: 905 GFLDLTEVKRMMERLGAXQTHLGLKAMISEVDEDGDNKISFREFLLI 765
G + L ++R+ + L L+AMI E D D D +I+ +EF+ I
Sbjct: 125 GKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAI 171
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 29.5 bits (63), Expect = 0.70
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Frame = -1
Query: 911 RDGFL---DLTEVKRMM--ERLGAXQTHLGLKAMISEVDEDGDNKISFREF 774
RDG++ +L V +MM L Q + I EVD+D D KISF EF
Sbjct: 106 RDGYISNGELYLVLKMMVGTNLREDQLQQIVDKTIMEVDKDRDGKISFEEF 156
>SPCC622.06c |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 122
Score = 29.5 bits (63), Expect = 0.70
Identities = 10/39 (25%), Positives = 21/39 (53%)
Frame = -1
Query: 503 NRKRYCYLSSL*DVMLPMLGMSCSNSVLFFKQNKINFSV 387
N+ YC L ++ D ++ + + C +L+F K+N +
Sbjct: 67 NKNTYCELPAVADAIINSIALVCIIVILYFSSRKLNVEI 105
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = -1
Query: 899 LDLTEVKRMMERLGAXQTHLGLKAMISEVDEDGDNKISFREF 774
LDL +V RM + L + L+ + D D K+SF EF
Sbjct: 314 LDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIEN 494
R LKS +S ++ +K+R GK+RK +S + SN N IE+
Sbjct: 550 RPLKSQKNTVSINNKIDTSKRRRKGKRRKRVSDEHSAS-----SNFNEIES 595
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 376 RSKLTEKLILFCLKNNTLLLQLIPSIGNITSYRLDK 483
RSK+ FCL N + L LI +IGN L K
Sbjct: 339 RSKVGPGSCFFCLSNPNVALHLIVAIGNEAYMALPK 374
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 4.5
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = -2
Query: 610 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 497
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 5.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 646 RKLKSSLKVISFTTRLF 596
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -2
Query: 550 GGSNLKKK-LRYSNTNRIENDIVICLVC 470
G +LK++ L+YSN + ND +C+ C
Sbjct: 149 GSESLKERSLKYSNRLQASNDTGVCVKC 176
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,444,437
Number of Sequences: 5004
Number of extensions: 67079
Number of successful extensions: 176
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 464508080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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