Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a05r
         (914 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              27   0.18 
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    23   5.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   6.8  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    22   8.9  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   8.9  

>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 27.5 bits (58), Expect = 0.18
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
 Frame = -1

Query: 908 DGFLDLTEVKRMMERLGAXQTHLG--LKAMISEVDEDGDNKISFREFLLIYRK 756
           +G L+  E+++  E     +   G  L  MIS  D DGD K++  EF + + K
Sbjct: 250 NGNLEREELEQFAENEDLEELCRGCNLGHMISYDDTDGDGKLNVNEFYMAFSK 302


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 5.1
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = +3

Query: 87  LYNATNYANIRLSLASFEHNICILYYSLKEKNYGS 191
           L+N T Y   ++ L    H +      LK++ Y S
Sbjct: 234 LFNLTKYGKNQIKLLEIIHGLTKKVIQLKKEEYKS 268


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.2 bits (45), Expect = 6.8
 Identities = 8/32 (25%), Positives = 18/32 (56%)
 Frame = +3

Query: 729 IHFQFTSTCFSVDEEKLSKTNLVITIFIDLRD 824
           +H     T +   + +  +++L +TI +D+RD
Sbjct: 157 LHDNKLITMYRFPQNQFKESSLFVTIAVDVRD 188


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
           peptide protein.
          Length = 50

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 300 MQTQFYCKKHASRPHI 347
           M  +  CK+H  +PHI
Sbjct: 26  MSIKCNCKRHVIKPHI 41


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 8.9
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 446 GMSCSNSVLFFKQNK 402
           G + SNS + FKQNK
Sbjct: 149 GSNSSNSDVLFKQNK 163


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,253
Number of Sequences: 438
Number of extensions: 4624
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29750994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)