Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a05f
(750 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 49 8e-07
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 41 2e-04
SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyce... 38 0.001
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 30 0.40
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 29 0.71
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 28 1.2
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 28 1.2
SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr 2|||Ma... 28 1.6
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 24 3.6
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 24 3.6
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 24 3.6
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 24 3.6
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 24 3.6
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 24 3.6
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 24 4.6
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 24 4.6
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 24 4.6
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 24 4.6
SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces ... 26 5.0
SPBC1347.03 |meu14||sporulation protein Meu14|Schizosaccharomyce... 26 6.6
SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces ... 25 8.7
SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyce... 25 8.7
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 23 9.8
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 48.8 bits (111), Expect = 8e-07
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = +1
Query: 229 KEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKISFR 408
++I ++ F+ FD +DG + E+ +M LG T L+ MI+EVD DG+ I F
Sbjct: 9 EQIAEFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFT 68
Query: 409 EFL-LIYRKAR 438
EFL ++ RK +
Sbjct: 69 EFLTMMARKMK 79
Score = 37.9 bits (84), Expect = 0.002
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Frame = +1
Query: 202 YTEFHEFSRKEIK----QYEV--TFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAM 363
+TEF +++K + EV F FD+ +G++ + E+ ++ LG + + M
Sbjct: 67 FTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADM 126
Query: 364 ISEVDEDGDNKISFREF 414
I E D DGD I++ EF
Sbjct: 127 IREADTDGDGVINYEEF 143
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 41.1 bits (92), Expect = 2e-04
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = +1
Query: 190 FVNVYTEFHEFSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMIS 369
FV V TE R +++ + F FD+ G + L ++R+ + L L+AMI
Sbjct: 95 FVRVMTE-KIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIE 153
Query: 370 EVDEDGDNKISFREFLLI 423
E D D D +I+ +EF+ I
Sbjct: 154 EFDLDQDGEINEQEFIAI 171
>SPCC830.06 |||calcineurin regulatory subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 174
Score = 38.3 bits (85), Expect = 0.001
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Frame = +1
Query: 187 KFVNVYTEFHEFSRKEIKQYEVTFNKFDEGRDGFL---DLTEVKRMM--ERLGAPQTHLG 351
+F+N + F KE K + F +D RDG++ +L V +MM L Q
Sbjct: 77 EFINSLSVFSVHGNKEEK-LKFAFKIYDIDRDGYISNGELYLVLKMMVGTNLREDQLQQI 135
Query: 352 LKAMISEVDEDGDNKISFREF 414
+ I EVD+D D KISF EF
Sbjct: 136 VDKTIMEVDKDRDGKISFEEF 156
Score = 34.3 bits (75), Expect = 0.019
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +1
Query: 220 FSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKI 399
FS +EI++ F K D + G +D E + P + S VDEDG +
Sbjct: 18 FSNEEIERIRKRFIKIDANQSGSIDRNEFLSIPSVASNPLA----SRLFSVVDEDGGGDV 73
Query: 400 SFREFL 417
F+EF+
Sbjct: 74 DFQEFI 79
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 29.9 bits (64), Expect = 0.40
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 256 FNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNKISFREF 414
+ K ++ + LDL +V RM + L + L+ + D D K+SF EF
Sbjct: 303 WEKLEKEQSAQLDLGDVHRMCQMLHLNASMEFLEETFQKADADHSGKLSFEEF 355
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 29.1 bits (62), Expect = 0.71
Identities = 21/99 (21%), Positives = 40/99 (40%)
Frame = +1
Query: 145 NDKLEEGVEIKPKYKFVNVYTEFHEFSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMER 324
+ +E ++ P N EFH+ + +Q+E + + + +L + KR + +
Sbjct: 336 SSNVESSEDVDPASLLQN--EEFHKLIEERQRQHEERLKRINANKKALEELNQKKRELAQ 393
Query: 325 LGAPQTHLGLKAMISEVDEDGDNKISFREFLLIYRKARA 441
+ L L I E D G+ ++ E KA A
Sbjct: 394 QQLKEQEL-LMQKIKETDRSGNKRLMLLETQHSLLKAEA 431
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 28.3 bits (60), Expect = 1.2
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 166 VEIKPKY-KFVNVYTEFHEFSRKEIKQYEVTFNKFDEGRD 282
V+ KY + + V T + S E K+Y + FN DE D
Sbjct: 1199 VDFSEKYTQLIPVITTYTHLSEVENKKYSLRFNSIDEALD 1238
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 28.3 bits (60), Expect = 1.2
Identities = 17/51 (33%), Positives = 26/51 (50%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIEN 694
R LKS +S ++ +K+R GK+RK +S + SN N IE+
Sbjct: 550 RPLKSQKNTVSINNKIDTSKRRRKGKRRKRVSDEHSAS-----SNFNEIES 595
>SPBC1778.06c |fim1||fimbrin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 614
Score = 27.9 bits (59), Expect = 1.6
Identities = 18/79 (22%), Positives = 35/79 (44%)
Frame = +1
Query: 208 EFHEFSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDG 387
++ E + +EI FNK D G+LD + E ++ ++ I EV+ D
Sbjct: 9 KYPELTNEEILTLTDQFNKLDVDGKGYLDQPTTIKAFED-SKKGSYDEVREAIREVNVDS 67
Query: 388 DNKISFREFLLIYRKARAG 444
++ +F+ I+ + G
Sbjct: 68 SGRVEPEDFVGIFNVLKKG 86
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 3.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 23.8 bits (49), Expect(2) = 4.6
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQLQNKNLGKESLSKKNNTTNSRNLRKTNVSRIE 237
Score = 20.6 bits (41), Expect(2) = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
>SPAC1687.04 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 501
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +2
Query: 638 GGSNLKKK-LRYSNTNRIENDIVICLVC 718
G +LK++ L+YSN + ND +C+ C
Sbjct: 149 GSESLKERSLKYSNRLQASNDTGVCVKC 176
>SPBC1347.03 |meu14||sporulation protein Meu14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 335
Score = 25.8 bits (54), Expect = 6.6
Identities = 14/60 (23%), Positives = 26/60 (43%)
Frame = +1
Query: 217 EFSRKEIKQYEVTFNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGDNK 396
EF+RK E + + D G ++ +VK + L P+ ++S + E+ K
Sbjct: 266 EFTRKSSSSVEFSDHSQDSGDPSQQNILQVKNVQAVLSIPEAESYKAQLLSSIAEEQKKK 325
>SPAC9E9.12c |ybt1|abc1|ABC transporter Ybt1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1427
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 657 KSCVIPTLIESKTILLFV*SV 719
+SC + TL++ KTI+LF +V
Sbjct: 747 ESCFLSTLLQHKTIILFTHNV 767
>SPAC22H10.07 |scd2|ral3|scaffold protein Scd2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 536
Score = 25.4 bits (53), Expect = 8.7
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +1
Query: 355 KAMISEVDEDGDNKISFREFLLIYRKARAGELEMDSGLDALARLTEIN 498
K + SE D DG +ISF + R+ E+ SG L + + +
Sbjct: 86 KTVKSERDSDGSGQISFTDLTTNSSTTRSSISELHSGSQPLFGIVQFD 133
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 22.6 bits (46), Expect(2) = 9.8
Identities = 10/38 (26%), Positives = 21/38 (55%)
Frame = +2
Query: 578 TTRLFKNKKRSVGKQRKELSGGSNLKKKLRYSNTNRIE 691
T + F+ + +++GK+ + + LR +N +RIE
Sbjct: 200 THKRFQPQNKNLGKEFLPKKNNTTNSRNLRKTNISRIE 237
Score = 20.6 bits (41), Expect(2) = 9.8
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +2
Query: 542 RKLKSSLKVISFTTRLF 592
RKL S V F TRLF
Sbjct: 144 RKLMSKANVDDFHTRLF 160
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,784,472
Number of Sequences: 5004
Number of extensions: 53281
Number of successful extensions: 183
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 165
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 183
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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