Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a05f
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenin...    29   0.12 
CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence re...    27   0.47 
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.    23   7.6  

>AM042695-1|CAJ14970.1|  396|Anopheles gambiae 3-hydroxykynurenine
           transaminase protein.
          Length = 396

 Score = 29.5 bits (63), Expect = 0.12
 Identities = 13/45 (28%), Positives = 23/45 (51%)
 Frame = +1

Query: 256 FNKFDEGRDGFLDLTEVKRMMERLGAPQTHLGLKAMISEVDEDGD 390
           F   DE +DG   + + +       +   H G++AM+S + E+GD
Sbjct: 50  FRTMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGD 94


>CR954257-7|CAJ14158.1|  284|Anopheles gambiae signal sequence
           receptor protein.
          Length = 284

 Score = 27.5 bits (58), Expect = 0.47
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +2

Query: 11  KAPTAASRIVESATLQKTDFQY-FSPRK*WQQLKN 112
           K PTAA ++VE+ T    D  Y + P +  +QL+N
Sbjct: 228 KRPTAARKVVETGTASTKDVDYEWIPSETLKQLQN 262


>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
          Length = 1036

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +1

Query: 121 ILSRRQEINDKLEEGVEIKPK 183
           ++ RRQE+N K++   E+KP+
Sbjct: 379 LMGRRQELNQKID--TELKPE 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,231
Number of Sequences: 2352
Number of extensions: 12481
Number of successful extensions: 67
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 67
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)