Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a04f
(786 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 3.2
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 3.2
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 7.4
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 9.8
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 9.8
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 9.8
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 9.8
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 9.8
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 9.8
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 21 9.8
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 21 9.8
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 3.2
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = -3
Query: 313 SVRCNEYLMSSTSDSKECQLICGVHIPGLLSKLSNKPS 200
S R ++ L+ D+ C CG+ PG + LSN+ S
Sbjct: 71 STRYDKRLLPPVQDADFC---CGMRWPGDATGLSNRSS 105
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 23.0 bits (47), Expect = 3.2
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 140 VNHEGIPIKSSLDNATSVLYAGLIGQ 217
+ H+G PI+ + T ++ AG++G+
Sbjct: 574 LTHKGKPIRMRIGIHTGMVLAGVVGK 599
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.8 bits (44), Expect = 7.4
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +3
Query: 18 FVYELSVVENFSFEAHT*WPPRSKKRSRGSKPTKG*WVSSS*TTKVYQ----SKAH*IMP 185
FV+ + + ++ +T W R+KK+S+ + +SS +K S I+
Sbjct: 312 FVFVFAALLEYAAVNYTYWGARAKKKSKKKESDDKKVISSKSGSKANSPFPGSTEADIIE 371
Query: 186 LQCYMLGLLDSLLRRPGM 239
LQ + L S+ R G+
Sbjct: 372 LQDLRMSPLPSIRNRSGL 389
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 411 KTI*NNFNYKLTY 373
KTI NN NYK Y
Sbjct: 88 KTIHNNNNYKYNY 100
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 411 KTI*NNFNYKLTY 373
KTI NN NYK Y
Sbjct: 88 KTIHNNNNYKYNY 100
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 411 KTI*NNFNYKLTY 373
KTI NN NYK Y
Sbjct: 88 KTIHNNNNYKYNY 100
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 411 KTI*NNFNYKLTY 373
KTI NN NYK Y
Sbjct: 88 KTIHNNNNYKYNY 100
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 411 KTI*NNFNYKLTY 373
KTI NN NYK Y
Sbjct: 88 KTIHNNNNYKYNY 100
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -1
Query: 411 KTI*NNFNYKLTY 373
KTI NN NYK Y
Sbjct: 321 KTIHNNNNYKYNY 333
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 653 CNISIFNIIKKFHRKEITLFYNSIVCK 733
CN +I I K+ + SI+CK
Sbjct: 53 CNSAINPCIYALFSKDFRFAFKSIICK 79
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 21.4 bits (43), Expect = 9.8
Identities = 9/27 (33%), Positives = 13/27 (48%)
Frame = +2
Query: 653 CNISIFNIIKKFHRKEITLFYNSIVCK 733
CN +I I K+ + SI+CK
Sbjct: 501 CNSAINPCIYALFSKDFRFAFKSIICK 527
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,431
Number of Sequences: 438
Number of extensions: 5023
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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