Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV16a03r
(739 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC109050-1|AAI09051.1| 214|Homo sapiens TM2 domain containing 2... 189 1e-47
BC109049-1|AAI09050.1| 214|Homo sapiens TM2 domain containing 2... 189 1e-47
AF353991-1|AAK35065.1| 214|Homo sapiens BBP-like protein 1 prot... 189 1e-47
BC004878-1|AAH04878.2| 171|Homo sapiens TM2 domain containing 2... 175 2e-43
AK075155-1|BAC11437.1| 171|Homo sapiens protein ( Homo sapiens ... 175 2e-43
AK075027-1|BAC11359.1| 171|Homo sapiens protein ( Homo sapiens ... 175 2e-43
BC008873-1|AAH08873.1| 221|Homo sapiens TM2 domain containing 3... 58 2e-08
BC006150-1|AAH06150.1| 247|Homo sapiens TM2 domain containing 3... 58 2e-08
AK026257-1|BAB15415.1| 221|Homo sapiens protein ( Homo sapiens ... 58 2e-08
AF353992-1|AAK35066.1| 221|Homo sapiens BBP-like protein 2 prot... 58 2e-08
AL512689-1|CAC21647.1| 80|Homo sapiens hypothetical protein pr... 50 1e-05
>BC109050-1|AAI09051.1| 214|Homo sapiens TM2 domain containing 2
protein.
Length = 214
Score = 189 bits (460), Expect = 1e-47
Identities = 85/173 (49%), Positives = 106/173 (61%)
Frame = -3
Query: 620 STAVTVLFITGIIKAKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQ 441
+TA L G + + S E P P++ CSYLP EF++C++P+DH GN TA Q
Sbjct: 38 ATAEPELTSAGAAQPEGPGGAASWEYGDPHSPVILCSYLPDEFIECEDPVDHVGNATASQ 97
Query: 440 ATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYS 261
G+GC+KFGG Y VE VQC ALDGIEC R+F R+ PC++Y+GHYF TTL+YS
Sbjct: 98 ELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYS 157
Query: 260 ILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGSNW 102
LG G+DRFCLG GIWW VD++LLIT L P DGSNW
Sbjct: 158 FFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNW 210
>BC109049-1|AAI09050.1| 214|Homo sapiens TM2 domain containing 2
protein.
Length = 214
Score = 189 bits (460), Expect = 1e-47
Identities = 85/173 (49%), Positives = 106/173 (61%)
Frame = -3
Query: 620 STAVTVLFITGIIKAKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQ 441
+TA L G + + S E P P++ CSYLP EF++C++P+DH GN TA Q
Sbjct: 38 ATAEPELTSAGAAQPEGPGGAASWEYGDPHSPVILCSYLPDEFIECEDPVDHVGNATASQ 97
Query: 440 ATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYS 261
G+GC+KFGG Y VE VQC ALDGIEC R+F R+ PC++Y+GHYF TTL+YS
Sbjct: 98 ELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYS 157
Query: 260 ILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGSNW 102
LG G+DRFCLG GIWW VD++LLIT L P DGSNW
Sbjct: 158 FFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNW 210
>AF353991-1|AAK35065.1| 214|Homo sapiens BBP-like protein 1
protein.
Length = 214
Score = 189 bits (460), Expect = 1e-47
Identities = 85/173 (49%), Positives = 106/173 (61%)
Frame = -3
Query: 620 STAVTVLFITGIIKAKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQ 441
+TA L G + + S E P P++ CSYLP EF++C++P+DH GN TA Q
Sbjct: 38 ATAEPELTSAGAAQPEGPGGAASWEYGDPHSPVILCSYLPDEFIECEDPVDHVGNATASQ 97
Query: 440 ATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYS 261
G+GC+KFGG Y VE VQC ALDGIEC R+F R+ PC++Y+GHYF TTL+YS
Sbjct: 98 ELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPRTFLRENKPCIKYTGHYFITTLLYS 157
Query: 260 ILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGSNW 102
LG G+DRFCLG GIWW VD++LLIT L P DGSNW
Sbjct: 158 FFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVDLILLITGGLMPSDGSNW 210
>BC004878-1|AAH04878.2| 171|Homo sapiens TM2 domain containing 2
protein.
Length = 171
Score = 175 bits (425), Expect = 2e-43
Identities = 74/137 (54%), Positives = 91/137 (66%)
Frame = -3
Query: 512 SYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSR 333
+Y P EF++C++P+DH GN TA Q G+GC+KFGG Y VE VQC ALDGIEC R
Sbjct: 31 NYRPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPR 90
Query: 332 SFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWWIVD 153
+F R+ PC++Y+GHYF TTL+YS LG G+DRFCLG GIWW VD
Sbjct: 91 TFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVD 150
Query: 152 VVLLITNSLHPEDGSNW 102
++LLIT L P DGSNW
Sbjct: 151 LILLITGGLMPSDGSNW 167
>AK075155-1|BAC11437.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ90674 fis, clone PLACE1005660, highly similar to
BBP-like protein 1 isoform a. ).
Length = 171
Score = 175 bits (425), Expect = 2e-43
Identities = 74/137 (54%), Positives = 91/137 (66%)
Frame = -3
Query: 512 SYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSR 333
+Y P EF++C++P+DH GN TA Q G+GC+KFGG Y VE VQC ALDGIEC R
Sbjct: 31 NYRPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPR 90
Query: 332 SFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWWIVD 153
+F R+ PC++Y+GHYF TTL+YS LG G+DRFCLG GIWW VD
Sbjct: 91 TFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVD 150
Query: 152 VVLLITNSLHPEDGSNW 102
++LLIT L P DGSNW
Sbjct: 151 LILLITGGLMPSDGSNW 167
>AK075027-1|BAC11359.1| 171|Homo sapiens protein ( Homo sapiens
cDNA FLJ90546 fis, clone OVARC1000439, highly similar to
BBP-like protein 1 isoform a. ).
Length = 171
Score = 175 bits (425), Expect = 2e-43
Identities = 74/137 (54%), Positives = 91/137 (66%)
Frame = -3
Query: 512 SYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCKALDGIECYGSR 333
+Y P EF++C++P+DH GN TA Q G+GC+KFGG Y VE VQC ALDGIEC R
Sbjct: 31 NYRPDEFIECEDPVDHVGNATASQELGYGCLKFGGQAYSDVEHTSVQCHALDGIECASPR 90
Query: 332 SFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWWIVD 153
+F R+ PC++Y+GHYF TTL+YS LG G+DRFCLG GIWW VD
Sbjct: 91 TFLRENKPCIKYTGHYFITTLLYSFFLGCFGVDRFCLGHTGTAVGKLLTLGGLGIWWFVD 150
Query: 152 VVLLITNSLHPEDGSNW 102
++LLIT L P DGSNW
Sbjct: 151 LILLITGGLMPSDGSNW 167
>BC008873-1|AAH08873.1| 221|Homo sapiens TM2 domain containing 3
protein.
Length = 221
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/94 (34%), Positives = 47/94 (50%)
Frame = -3
Query: 389 EKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXX 210
++ C D + C G+R+FP+ + C G+ ++T L SI LG G DRF LGQ
Sbjct: 126 QRYPANCTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWR 184
Query: 209 XXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGS 108
GIW ++DV+L+ + P DGS
Sbjct: 185 EGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGS 218
>BC006150-1|AAH06150.1| 247|Homo sapiens TM2 domain containing 3
protein.
Length = 247
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/94 (34%), Positives = 47/94 (50%)
Frame = -3
Query: 389 EKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXX 210
++ C D + C G+R+FP+ + C G+ ++T L SI LG G DRF LGQ
Sbjct: 152 QRYPANCTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWR 210
Query: 209 XXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGS 108
GIW ++DV+L+ + P DGS
Sbjct: 211 EGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGS 244
>AK026257-1|BAB15415.1| 221|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22604 fis, clone HSI04630. ).
Length = 221
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/94 (34%), Positives = 47/94 (50%)
Frame = -3
Query: 389 EKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXX 210
++ C D + C G+R+FP+ + C G+ ++T L SI LG G DRF LGQ
Sbjct: 126 QRYPANCTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWR 184
Query: 209 XXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGS 108
GIW ++DV+L+ + P DGS
Sbjct: 185 EGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGS 218
>AF353992-1|AAK35066.1| 221|Homo sapiens BBP-like protein 2
protein.
Length = 221
Score = 58.4 bits (135), Expect = 2e-08
Identities = 32/94 (34%), Positives = 47/94 (50%)
Frame = -3
Query: 389 EKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXX 210
++ C D + C G+R+FP+ + C G+ ++T L SI LG G DRF LGQ
Sbjct: 126 QRYPANCTVRDHVHCLGNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWR 184
Query: 209 XXXXXXXXXXXXGIWWIVDVVLLITNSLHPEDGS 108
GIW ++DV+L+ + P DGS
Sbjct: 185 EGLGKLFSFGGLGIWTLIDVLLIGVGYVGPADGS 218
>AL512689-1|CAC21647.1| 80|Homo sapiens hypothetical protein
protein.
Length = 80
Score = 49.6 bits (113), Expect = 1e-05
Identities = 29/78 (37%), Positives = 41/78 (52%)
Frame = -3
Query: 341 GSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXXXXXXXXXXXGIWW 162
G+R+FP+ + C G+ ++T L SI LG G DRF LGQ GIW
Sbjct: 1 GNRTFPKMLY-CNWTGGYKWSTALALSITLGGFGADRFYLGQWREGLGKLFSFGGLGIWT 59
Query: 161 IVDVVLLITNSLHPEDGS 108
++DV+L+ + P DGS
Sbjct: 60 LIDVLLIGVGYVGPADGS 77
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,866,901
Number of Sequences: 237096
Number of extensions: 2327705
Number of successful extensions: 4310
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4306
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -