Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV16a03f
         (770 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119007-1|AAM50867.1|  172|Drosophila melanogaster LP03404p pro...   214   1e-55
AE014298-1963|AAF48318.2|  172|Drosophila melanogaster CG11103-P...   214   1e-55
AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p pro...    56   5e-08
AF217797-1|AAF36924.2|  284|Drosophila melanogaster almondex pro...    56   5e-08
AF181623-1|AAD55409.1|  284|Drosophila melanogaster BcDNA.GH0297...    56   5e-08
AE014298-1313|AAF46474.2|  284|Drosophila melanogaster CG12127-P...    56   5e-08
AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-P...    56   5e-08
X80839-1|CAA56811.1| 1477|Drosophila melanogaster tumor-supresso...    30   4.0  
AY051653-1|AAK93077.1| 1477|Drosophila melanogaster LD05287p pro...    30   4.0  
AE014297-4107|AAN14107.1| 1477|Drosophila melanogaster CG5954-PB...    30   4.0  
AE014297-4106|AAF56691.1| 1477|Drosophila melanogaster CG5954-PA...    30   4.0  
AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...    29   9.3  
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...    29   9.3  

>AY119007-1|AAM50867.1|  172|Drosophila melanogaster LP03404p
           protein.
          Length = 172

 Score =  214 bits (522), Expect = 1e-55
 Identities = 94/163 (57%), Positives = 113/163 (69%)
 Frame = +3

Query: 162 AKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRY 341
           A S S       + PLGP V CS+LP +FLDC +P+DH+ N TA+Q   +GC+KFGG  Y
Sbjct: 10  ASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTY 69

Query: 342 DQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 521
           ++VE A V C     IECYG+R+F R G PCVRY+ HYF TTLIYS+LLGFLGMDRFCLG
Sbjct: 70  EEVEHAMVWCTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLG 129

Query: 522 QXXXXXXXXXXXXXXXIWWIVDVVLLITNSLHPEDGSNWNPYV 650
           Q               +WWI+DV+LLITN+L PEDGSNWNPYV
Sbjct: 130 QTGTAVGKLLTMGGVGVWWIIDVILLITNNLLPEDGSNWNPYV 172


>AE014298-1963|AAF48318.2|  172|Drosophila melanogaster CG11103-PB
           protein.
          Length = 172

 Score =  214 bits (522), Expect = 1e-55
 Identities = 94/163 (57%), Positives = 113/163 (69%)
 Frame = +3

Query: 162 AKSESDPISKEPYRPLGPLVKCSYLPLEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRY 341
           A S S       + PLGP V CS+LP +FLDC +P+DH+ N TA+Q   +GC+KFGG  Y
Sbjct: 10  ASSASGGAGNSAFYPLGPNVMCSFLPRDFLDCKDPVDHRENATAQQEKKYGCLKFGGSTY 69

Query: 342 DQVEKAKVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLG 521
           ++VE A V C     IECYG+R+F R G PCVRY+ HYF TTLIYS+LLGFLGMDRFCLG
Sbjct: 70  EEVEHAMVWCTVFADIECYGNRTFLRAGVPCVRYTDHYFVTTLIYSMLLGFLGMDRFCLG 129

Query: 522 QXXXXXXXXXXXXXXXIWWIVDVVLLITNSLHPEDGSNWNPYV 650
           Q               +WWI+DV+LLITN+L PEDGSNWNPYV
Sbjct: 130 QTGTAVGKLLTMGGVGVWWIIDVILLITNNLLPEDGSNWNPYV 172


>AY061343-1|AAL28891.1|  178|Drosophila melanogaster LD27358p
           protein.
          Length = 178

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +3

Query: 354 KAKVQCKALDGIECY--GSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQX 527
           +A+V C A + I C   G+ +F R+  PC   +G++  TTL+ S+ LG  G+DRF LG  
Sbjct: 57  RARVWCIAANEINCTETGNATFTRE-VPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYP 115

Query: 528 XXXXXXXXXXXXXXIWWIVDVVLLITNSLHPEDGS 632
                         +  ++D+VL+    + P DGS
Sbjct: 116 GIGLLKFCTLGGMFLGQLIDIVLIALQVVGPADGS 150


>AF217797-1|AAF36924.2|  284|Drosophila melanogaster almondex
           protein.
          Length = 284

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = +3

Query: 360 KVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXX 539
           +  C     + C G+RSF R+   C    G+ ++T L+ S+ LG  G DRF LG      
Sbjct: 192 RTNCTVHHDVLCLGNRSFTRN-LRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGI 250

Query: 540 XXXXXXXXXXIWWIVDVVLLITNSLHPEDGS 632
                     +W I+DV+L+  + L P DGS
Sbjct: 251 GKLFSFGGLGVWTIIDVLLISMHYLGPADGS 281


>AF181623-1|AAD55409.1|  284|Drosophila melanogaster BcDNA.GH02974
           protein.
          Length = 284

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = +3

Query: 360 KVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXX 539
           +  C     + C G+RSF R+   C    G+ ++T L+ S+ LG  G DRF LG      
Sbjct: 192 RTNCTVHHDVLCLGNRSFTRN-LRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGI 250

Query: 540 XXXXXXXXXXIWWIVDVVLLITNSLHPEDGS 632
                     +W I+DV+L+  + L P DGS
Sbjct: 251 GKLFSFGGLGVWTIIDVLLISMHYLGPADGS 281


>AE014298-1313|AAF46474.2|  284|Drosophila melanogaster CG12127-PA
           protein.
          Length = 284

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 30/91 (32%), Positives = 44/91 (48%)
 Frame = +3

Query: 360 KVQCKALDGIECYGSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQXXXXX 539
           +  C     + C G+RSF R+   C    G+ ++T L+ S+ LG  G DRF LG      
Sbjct: 192 RTNCTVHHDVLCLGNRSFTRN-LRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGI 250

Query: 540 XXXXXXXXXXIWWIVDVVLLITNSLHPEDGS 632
                     +W I+DV+L+  + L P DGS
Sbjct: 251 GKLFSFGGLGVWTIIDVLLISMHYLGPADGS 281


>AE013599-3195|AAF46720.1|  178|Drosophila melanogaster CG10795-PA
           protein.
          Length = 178

 Score = 56.0 bits (129), Expect = 5e-08
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +3

Query: 354 KAKVQCKALDGIECY--GSRSFPRDGFPCVRYSGHYFTTTLIYSILLGFLGMDRFCLGQX 527
           +A+V C A + I C   G+ +F R+  PC   +G++  TTL+ S+ LG  G+DRF LG  
Sbjct: 57  RARVWCIAANEINCTETGNATFTRE-VPCKWTNGYHLDTTLLLSVFLGMFGVDRFYLGYP 115

Query: 528 XXXXXXXXXXXXXXIWWIVDVVLLITNSLHPEDGS 632
                         +  ++D+VL+    + P DGS
Sbjct: 116 GIGLLKFCTLGGMFLGQLIDIVLIALQVVGPADGS 150


>X80839-1|CAA56811.1| 1477|Drosophila melanogaster tumor-supressor
           protein.
          Length = 1477

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 51  VSSIC*NTFEYNVYGDIMALITKSTAVTVLFITGIIKAKSESDPISKEPY 200
           V++I  ++ + + Y D+  + TK T   +  + GI   K+ES P+S+E +
Sbjct: 538 VTTISSSSSDSSSYSDVEVVPTKKTEKELSLLPGISIIKAESLPLSREDF 587


>AY051653-1|AAK93077.1| 1477|Drosophila melanogaster LD05287p
           protein.
          Length = 1477

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 51  VSSIC*NTFEYNVYGDIMALITKSTAVTVLFITGIIKAKSESDPISKEPY 200
           V++I  ++ + + Y D+  + TK T   +  + GI   K+ES P+S+E +
Sbjct: 538 VTTISSSSSDSSSYSDVEVVPTKKTEKELSMLPGISIIKAESLPLSREDF 587


>AE014297-4107|AAN14107.1| 1477|Drosophila melanogaster CG5954-PB,
           isoform B protein.
          Length = 1477

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 51  VSSIC*NTFEYNVYGDIMALITKSTAVTVLFITGIIKAKSESDPISKEPY 200
           V++I  ++ + + Y D+  + TK T   +  + GI   K+ES P+S+E +
Sbjct: 538 VTTISSSSSDSSSYSDVEVVPTKKTEKELSMLPGISIIKAESLPLSREDF 587


>AE014297-4106|AAF56691.1| 1477|Drosophila melanogaster CG5954-PA,
           isoform A protein.
          Length = 1477

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/50 (30%), Positives = 29/50 (58%)
 Frame = +3

Query: 51  VSSIC*NTFEYNVYGDIMALITKSTAVTVLFITGIIKAKSESDPISKEPY 200
           V++I  ++ + + Y D+  + TK T   +  + GI   K+ES P+S+E +
Sbjct: 538 VTTISSSSSDSSSYSDVEVVPTKKTEKELSMLPGISIIKAESLPLSREDF 587


>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -2

Query: 220 TKGPSGLYGSFEIGSLSDFALIIPVINNTVTAV 122
           +KGPSGL G+F+ GS  DF +   +I+   T V
Sbjct: 480 SKGPSGLEGTFKSGSELDFYIDDDMIHIADTKV 512


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score = 28.7 bits (61), Expect = 9.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = -2

Query: 220 TKGPSGLYGSFEIGSLSDFALIIPVINNTVTAV 122
           +KGPSGL G+F+ GS  DF +   +I+   T V
Sbjct: 480 SKGPSGLEGTFKSGSELDFYIDDDMIHIADTKV 512


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,671,225
Number of Sequences: 53049
Number of extensions: 712984
Number of successful extensions: 1591
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1589
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3561257073
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)