Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15p18f
         (612 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0254 + 15857809-15858018,15858151-15858264,15859809-158600...    30   1.7  
10_08_0096 - 14765789-14766994                                         27   8.9  
06_03_0616 + 22772629-22773051                                         27   8.9  
03_02_0981 + 12917195-12917572,12917661-12917818,12918732-129187...    27   8.9  
01_01_0099 - 751627-752126,752866-753056,753188-753945                 27   8.9  

>07_03_0254 +
           15857809-15858018,15858151-15858264,15859809-15860010,
           15860245-15860319,15860406-15860498,15860554-15860636,
           15861067-15861180,15861632-15861746,15861840-15862030,
           15862102-15862218,15862514-15862594,15862729-15862964,
           15863219-15863258,15863393-15863968
          Length = 748

 Score = 29.9 bits (64), Expect = 1.7
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 168 LEFLDCDEPIDHKGNHTARQATGHGCVKFGGVRYDQVEKAKVQCK 302
           L +  C E + ++    A   T    V F  V++ Q+ K KVQCK
Sbjct: 375 LSYSTCAEQLLYEVGDPANYITPDLVVDFRDVKFQQISKDKVQCK 419


>10_08_0096 - 14765789-14766994
          Length = 401

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 547 GCRLLVINNTTSTIHQIPSPPRVKS 473
           G  LLVINN T T   IP+  R+KS
Sbjct: 30  GYHLLVINNYTRTKQAIPNGFRIKS 54


>06_03_0616 + 22772629-22773051
          Length = 140

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -1

Query: 264 GHLQI*RNHGLWLAGRCDSLYGR*VRRNLG 175
           G   + R +G WL GR D      +RR LG
Sbjct: 31  GQAMLARGYGRWLGGRVDPTTSGRIRRQLG 60


>03_02_0981 +
           12917195-12917572,12917661-12917818,12918732-12918765,
           12918942-12919074,12919167-12919221,12919281-12920064,
           12920440-12920769,12920788-12920895,12921259-12921678,
           12921775-12921847,12922291-12922376,12922873-12922992,
           12923086-12923156,12923350-12923449
          Length = 949

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = +3

Query: 426 GMDRFCLGQXXXXXXXXXXXXXXXIWWIVDVVLLITNSLHPEDGSNWNP 572
           G+DRFC+                   WI    ++I N+  P   S+W+P
Sbjct: 435 GIDRFCVFSPVLEDLKSEGIIHFRKHWIKGEPVVIRNAFEPSLSSSWDP 483


>01_01_0099 - 751627-752126,752866-753056,753188-753945
          Length = 482

 Score = 27.5 bits (58), Expect = 8.9
 Identities = 23/66 (34%), Positives = 30/66 (45%)
 Frame = -1

Query: 603 NSIYTGIIKHMDSNYYHLQGVGCW*SITLHQRSTKYQALLGSKVSPQLFLFDQDKIYPYL 424
           N I  GI + +  NY H    GC   I LH     +  LL S   P++  F   K+YP  
Sbjct: 415 NEIALGIARGI--NYLHQ---GCEMQI-LHFDIKPHNILLDSNFVPKVADFGLVKLYPCH 468

Query: 423 GILTRC 406
           GI+  C
Sbjct: 469 GIIVLC 474


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,982,651
Number of Sequences: 37544
Number of extensions: 354827
Number of successful extensions: 764
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 764
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1466594128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)