Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15p10f
(588 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908 109 2e-24
01_01_1205 - 9693702-9694517,9694591-9695076,9697014-9697095,969... 75 4e-14
10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223... 74 1e-13
07_01_0579 + 4299104-4299652,4300845-4300935,4301018-4301211,430... 65 3e-11
12_01_0297 - 2244793-2244945,2245337-2245396,2245529-2245628,224... 64 8e-11
11_01_0296 - 2222329-2222481,2222777-2222836,2222965-2223064,222... 62 4e-10
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 61 6e-10
01_06_0140 - 26881282-26881290,26882027-26882128,26882816-268829... 60 1e-09
03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328 34 0.073
02_01_0510 + 3703715-3705040 30 1.2
08_02_1064 - 24033941-24034127,24034432-24034476,24035355-240354... 29 2.1
07_01_0989 + 8348706-8348882,8348988-8349028,8350071-8350120,835... 29 2.7
12_02_1084 - 25928373-25928426,25928551-25928652,25928913-259290... 28 4.8
11_06_0728 + 26717018-26717306,26717494-26717598,26717789-267178... 28 4.8
07_01_0724 + 5529642-5531141 28 4.8
06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692 28 6.3
01_01_0840 - 6557931-6558377 28 6.3
10_08_0012 - 14092640-14093258,14093495-14093517 27 8.4
07_01_0910 + 7663019-7663091,7663439-7663551 27 8.4
07_01_0297 - 2156960-2157736 27 8.4
02_03_0122 - 15491106-15491509,15492668-15492695 27 8.4
>04_04_1590 - 34640923-34641735,34642313-34642774,34643648-34643908
Length = 511
Score = 109 bits (262), Expect = 2e-24
Identities = 55/123 (44%), Positives = 84/123 (68%)
Frame = +1
Query: 211 IDSKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREA 390
+++ + + + ++CT+GPASR+V +LEK++ GMNVAR NFSHG+HEYH ET+ N R+A
Sbjct: 13 LENDDARVPKTKLVCTLGPASRSVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLRQA 72
Query: 391 EKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNA 570
+ + A+ LDTKGPEIRTG L+ G ++L KG+ +LT ++DY+ KG+
Sbjct: 73 MHN------TGVLCAVMLDTKGPEIRTGFLKDG--KPIKLTKGQ--ELTVTTDYEIKGDE 122
Query: 571 DTI 579
+ I
Sbjct: 123 NMI 125
>01_01_1205 -
9693702-9694517,9694591-9695076,9697014-9697095,
9697876-9698051,9698326-9698580
Length = 604
Score = 74.9 bits (176), Expect = 4e-14
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = +1
Query: 247 IICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLGSPF 426
I+CT+GPASR+V ++ +++ GM VAR NFSHGSHEYH ET+ N R A +S +
Sbjct: 23 IVCTLGPASRSVEMIGRLLRAGMCVARFNFSHGSHEYHQETLDNLRAAMES------TGI 76
Query: 427 SLAIALDTKGPEIRTGLL 480
A+ LDTK + G+L
Sbjct: 77 LCAVMLDTKARDFVLGVL 94
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +1
Query: 442 LDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTI 579
L +GPEIRTG L+ G V+LKKG+ ++T S+DY KG+ + I
Sbjct: 176 LKIQGPEIRTGFLKDG--KPVQLKKGQ--EITVSTDYSIKGDDNMI 217
>10_08_0999 +
22121029-22121235,22121819-22122082,22122123-22122324,
22122456-22122590,22122668-22122778,22122871-22122959,
22123237-22123299,22123461-22123636,22123785-22123887,
22124286-22124461,22124625-22124733,22124851-22124943,
22126294-22126435,22126655-22126671
Length = 628
Score = 73.7 bits (173), Expect = 1e-13
Identities = 48/126 (38%), Positives = 68/126 (53%), Gaps = 18/126 (14%)
Frame = +1
Query: 235 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 414
R + I+CTIGP++ ++ K+ ETGMNVARMN SHG H+ H + I + K Y+AK
Sbjct: 89 RKTKIVCTIGPSTNTREMIWKLAETGMNVARMNMSHGDHQSHQKVI----DLVKEYNAKN 144
Query: 415 GSPFSLAIALDTK------------GPEIRTG------LLEGGGSAEVELKKGETIKLTT 540
+AI LDTK GPE+R+G +LE G +K+G + K T
Sbjct: 145 TDGNVIAIMLDTKQMSCDDRTSVMQGPEVRSGDVPEPIMLEEGQEFNFTIKRGVSTKDTV 204
Query: 541 SSDYQE 558
S +Y +
Sbjct: 205 SVNYDD 210
>07_01_0579 +
4299104-4299652,4300845-4300935,4301018-4301211,
4301501-4301622,4302378-4302856,4303033-4303334
Length = 578
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/91 (37%), Positives = 50/91 (54%)
Frame = +1
Query: 235 RLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKL 414
R + ++CT+GPA+ LE + GMNVAR+N HG E+H IR R +
Sbjct: 99 RRTKLVCTVGPATCGADELEALAVGGMNVARVNMCHGDREWHRGVIRAVRRLNEE----- 153
Query: 415 GSPFSLAIALDTKGPEIRTGLLEGGGSAEVE 507
F++A+ +DT+G EI G L G +A+ E
Sbjct: 154 -KGFAVAVMMDTEGSEIHMGDLGGAAAAKAE 183
>12_01_0297 -
2244793-2244945,2245337-2245396,2245529-2245628,
2245712-2245779,2245922-2246017,2246156-2246244,
2246320-2246464,2246643-2246732,2246816-2246887,
2247052-2247132,2247361-2247492,2247613-2247690,
2247930-2248085,2248227-2248324,2248418-2248499
Length = 499
Score = 64.1 bits (149), Expect = 8e-11
Identities = 38/100 (38%), Positives = 59/100 (59%)
Frame = +1
Query: 238 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 417
++ I+ T+GP SR+V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRSVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKVAIKS-TKKL- 58
Query: 418 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLT 537
A+ LDT GPE++ + A + L++ T+ LT
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEASISLEENGTVILT 91
>11_01_0296 -
2222329-2222481,2222777-2222836,2222965-2223064,
2223152-2223219,2223369-2223464,2223603-2223691,
2223762-2223906,2224100-2224189,2224271-2224342,
2224543-2224623,2224766-2224897,2225026-2225103,
2225280-2225435,2225521-2225618,2225712-2225793
Length = 499
Score = 61.7 bits (143), Expect = 4e-10
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = +1
Query: 238 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 417
++ I+ T+GP SR V + ++ GM+VAR +FS G EYH ET+ N + A KS + KL
Sbjct: 1 MTKIVGTLGPKSRAVDTISSCLKAGMSVARFDFSWGDAEYHQETLENLKLAIKS-TKKL- 58
Query: 418 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLT 537
A+ LDT GPE++ + A + L+ T+ LT
Sbjct: 59 ----CAVMLDTVGPELQ---VVNKSEAAISLEANGTVVLT 91
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 61.3 bits (142), Expect = 6e-10
Identities = 38/100 (38%), Positives = 57/100 (57%)
Frame = +1
Query: 238 LSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEKSYSAKLG 417
L+ I+ T+GP S +V V+++ + GM VAR +FS YH ET+ N R+A ++ + KL
Sbjct: 29 LTKIVGTLGPNSHSVEVIQECLTAGMAVARFDFSWMDASYHQETLNNLRKAAQNVN-KL- 86
Query: 418 SPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLT 537
+ LDT GPEI+ GG +ELK G + +T
Sbjct: 87 ----CPVMLDTLGPEIQVHNSTGG---PIELKAGNHVTIT 119
>01_06_0140 -
26881282-26881290,26882027-26882128,26882816-26882924,
26883712-26883860,26883941-26884043,26884635-26884810,
26885004-26885066,26885258-26885346,26885428-26885538,
26885610-26885744,26886415-26886580,26886788-26886856,
26886943-26887230,26888612-26888866
Length = 607
Score = 60.5 bits (140), Expect = 1e-09
Identities = 33/79 (41%), Positives = 47/79 (59%)
Frame = +1
Query: 217 SKSSYIRLSGIICTIGPASRNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAEK 396
SK + R + I+CTIGP++ ++ K+ E GMNVAR+N SHG H H + I + K
Sbjct: 108 SKPNVRRKTKIVCTIGPSTNTKEMIWKLAEAGMNVARLNMSHGDHASHQKVI----DLVK 163
Query: 397 SYSAKLGSPFSLAIALDTK 453
Y+A+ +AI LDTK
Sbjct: 164 EYNAQTKDNV-IAIMLDTK 181
>03_02_0854 - 11789850-11790524,11790602-11791063,11793119-11793328
Length = 448
Score = 34.3 bits (75), Expect = 0.073
Identities = 19/42 (45%), Positives = 27/42 (64%)
Frame = +1
Query: 454 GPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGNADTI 579
GPEIRTG L+ G ++LK+G+ I +T DY KG+ + I
Sbjct: 71 GPEIRTGFLKDG--KPIQLKQGKEITITI--DYSIKGDENLI 108
>02_01_0510 + 3703715-3705040
Length = 441
Score = 30.3 bits (65), Expect = 1.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +2
Query: 419 HPSLWPSHWTLKD 457
HP LWP HW +KD
Sbjct: 192 HPFLWPDHWPVKD 204
>08_02_1064 -
24033941-24034127,24034432-24034476,24035355-24035421,
24035521-24035600,24035691-24035769,24035864-24035939
Length = 177
Score = 29.5 bits (63), Expect = 2.1
Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +1
Query: 310 GMNVARMNFSHGSHEY--HAETIRNCREAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLE 483
G NV N +Y +AE IR R E+ ++ SP+ L L G E+ T +
Sbjct: 79 GRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEKSRDSSPWDLWYLLFQSGTEMTTEIEN 138
Query: 484 GGGSAEVELKKGETI 528
G E +KG +
Sbjct: 139 AGAEVAAEAEKGMAV 153
>07_01_0989 +
8348706-8348882,8348988-8349028,8350071-8350120,
8350502-8350646,8351570-8351626,8352141-8352261,
8352436-8352945,8353242-8353289
Length = 382
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 491 PPPSKSPVLISGPLVSNAMAKEKGEPSL 408
PPP+ SP L S P+ S +++EK +L
Sbjct: 335 PPPNPSPSLASAPVYSPVLSREKVRDAL 362
>12_02_1084 -
25928373-25928426,25928551-25928652,25928913-25929039,
25929292-25930730,25931430-25931447
Length = 579
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +1
Query: 220 KSSYIRLSGIICTIGPASRNVAVLEK 297
K + IRL+ IIC P + VAVL+K
Sbjct: 481 KRNEIRLTNIICQFNPLVQQVAVLKK 506
>11_06_0728 +
26717018-26717306,26717494-26717598,26717789-26717870,
26717979-26718055,26719087-26719151,26719261-26719302,
26719385-26719444,26719583-26720203,26720315-26720450,
26720667-26720734,26720811-26720948
Length = 560
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Frame = -1
Query: 243 GETDVRRLGV-NVETAHMLELGADVGDCGLFNCTRFVIVKFHNSFHFV*YFLNL 85
GE + +GV + AH L LGA + D GL + + + N + + Y+L+L
Sbjct: 97 GEETMNGMGVAGIGLAHALVLGAGIADLGLALVQKDMYNSYLNMYGSMVYWLSL 150
>07_01_0724 + 5529642-5531141
Length = 499
Score = 28.3 bits (60), Expect = 4.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 288 AREDDGDGNERGKDELLARFP*VPRRDHSQLSRGREELQ 404
AR+DDGDG+ RG+D A + + +R E+Q
Sbjct: 434 ARDDDGDGSFRGEDVAAAVRRVMAEEEGKVFARNAREMQ 472
>06_03_0589 - 22572914-22573035,22573353-22573412,22573554-22573692
Length = 106
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/53 (33%), Positives = 28/53 (52%)
Frame = -2
Query: 521 SPFFSSTSAEPPPSKSPVLISGPLVSNAMAKEKGEPSLAL*LFSASRQLRMVS 363
SP + S+ PPS +PV + G + A A + E S A+ + S++ RM S
Sbjct: 8 SPIPVAYSSGDPPSATPVPVPGSDLPAAPAAKSQEASPAVPVIDPSKEERMGS 60
>01_01_0840 - 6557931-6558377
Length = 148
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 303 GDGNERGKDELLARFP*VPRRDHSQLSR 386
GDG RG+D L R+P + RR S +R
Sbjct: 120 GDGKRRGRDGGLRRWPGMTRRRRSSSAR 147
>10_08_0012 - 14092640-14093258,14093495-14093517
Length = 213
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +1
Query: 274 RNVAVLEKMMETGMNVARMNFSHGSHEYHAETIRNCREAE 393
R+ ++LE + G ++ +F+ G H +H E N +A+
Sbjct: 18 RDYSLLEAITPNGKSIKSTSFAVGGHSWHVEYYPNGYDAD 57
>07_01_0910 + 7663019-7663091,7663439-7663551
Length = 61
Score = 27.5 bits (58), Expect = 8.4
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +1
Query: 427 SLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEKGN 567
S +A+ G +R GL+ GG E L +G ++ S ++E+ N
Sbjct: 5 SADLAVGLSGGGLRGGLMAGGARMETNLPRGR-VRANDMSTHRERPN 50
>07_01_0297 - 2156960-2157736
Length = 258
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/22 (59%), Positives = 14/22 (63%)
Frame = -3
Query: 205 DRTYAGAGSRRWRLWAFQLHPL 140
DR A RRWRL A+Q HPL
Sbjct: 51 DRLRFRAVCRRWRLAAWQQHPL 72
>02_03_0122 - 15491106-15491509,15492668-15492695
Length = 143
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +1
Query: 382 REAEKSYSAKLGSPFSLAIALDTKGPEIRTGLLEGGGSAEVELKKGETIKLTTSSDYQEK 561
R+ S +P S + PE T LEGGGS L++G + L+ Q
Sbjct: 30 RDGRSSRVVDPAAPPSRGLDPTPLAPEWVTAELEGGGSGSAALRRGGSAILSPGQQQQTS 89
Query: 562 GNAD 573
D
Sbjct: 90 RAVD 93
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,078,778
Number of Sequences: 37544
Number of extensions: 298867
Number of successful extensions: 1086
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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