Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15o12r
(703 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 25 0.70
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 25 0.92
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.8
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 25.0 bits (52), Expect = 0.70
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -1
Query: 223 VQKDLNIDELSVNVIGSVPNSNNLVR 146
V D N DE++ ++G+ N NNL++
Sbjct: 390 VNNDFNFDEVNFRILGA--NVNNLIK 413
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 24.6 bits (51), Expect = 0.92
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -1
Query: 667 LNISNLLLVIFALNNISVYGQI 602
LN+ N+ V+F + N+ ++GQ+
Sbjct: 2 LNMKNIFPVLFVIINVLLHGQV 23
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 141 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 171
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 141 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 171
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 141 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 171
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 141 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 171
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 141 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 171
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 141 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 171
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 2.8
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 169 VPIQSHSHSTRQYLNPFVP*SRNLPLDAYKFQ 264
VP+Q R ++ P P R +P +AYKF+
Sbjct: 144 VPMQEQIPRFR-HIGPSTPFPRFIPPNAYKFR 174
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,146
Number of Sequences: 438
Number of extensions: 5131
Number of successful extensions: 15
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21561255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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