Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15o07r
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    25   1.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   3.8  
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   5.0  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    23   5.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   5.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   5.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.6  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   6.6  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.6  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    22   6.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   8.8  

>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 584 PLPVQCSVTNFLPDASISARLLLHAQLMSLASFRHICPNILFP 712
           P+PV     NF P   + + + +  Q+     FRHI P+ LFP
Sbjct: 113 PVPVPVYYGNF-PPRPMGSWISIQEQI---PRFRHIGPSTLFP 151


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 9/43 (20%), Positives = 24/43 (55%)
 Frame = -1

Query: 201 MIYFPERGMTVTEICLANGNYQPHQNVGDVYYCVDTDGYPIEF 73
           +I++     ++T++     +Y  + N+G++YY +    YP+ +
Sbjct: 24  LIFYGSIMFSMTQVNKEECDYYQNLNLGEIYY-IYNPRYPLPY 65


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 687 TFVQIFCFHLYRNRNTVL 740
           TF ++F FHL  NR+ ++
Sbjct: 210 TFCRVFPFHLMFNRDLII 227


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 687 TFVQIFCFHLYRNRNTVL 740
           TF ++F FHL  NR+ ++
Sbjct: 210 TFCRVFPFHLMFNRDLII 227


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 264 GSWQVISSEMSRMNCNCARDTMIYFPE 184
           G  ++ S  +  ++CN   DTM+Y  +
Sbjct: 181 GKGRLSSLAVQSLDCNTNSDTMVYIAD 207


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -1

Query: 264 GSWQVISSEMSRMNCNCARDTMIYFP 187
           G W+V  +  SRM   C+R  + YFP
Sbjct: 102 GLWRVCVAISSRMEYECSR--IDYFP 125


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 264 GSWQVISSEMSRMNCNCARDTMIYFPE 184
           G  ++ S  +  ++CN   DTM+Y  +
Sbjct: 181 GKGRLSSLAVQSLDCNTNSDTMVYIAD 207


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = -1

Query: 264 GSWQVISSEMSRMNCNCARDTMIYFPE 184
           G  ++ S  +  ++CN   DTM+Y  +
Sbjct: 181 GKGRLSSLAVQSLDCNTNSDTMVYIAD 207


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = -1

Query: 195 YFPERGMTVTEICLANGNYQPHQNVGDVYYCVDTDGYPIEFLDEWP 58
           Y P R +  T        Y P    G V   V+ D   + F+D  P
Sbjct: 275 YRPARAIVETLANFMRFYYNPFTPFGPVTEKVNNDSNSLPFIDRTP 320


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 573 PLQCDDGLCWCANVKTGQPTVTPVPQEDM 487
           P+Q DDG+    +VK     V  +P +++
Sbjct: 341 PIQLDDGIDILDDVKCEDERVISIPDKEI 369


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 13/46 (28%), Positives = 17/46 (36%)
 Frame = -1

Query: 195 YFPERGMTVTEICLANGNYQPHQNVGDVYYCVDTDGYPIEFLDEWP 58
           Y P R +  T        Y P    G V   V+ D   + F+D  P
Sbjct: 275 YRPARAIVETLANFMRFYYNPFTPFGPVTEKVNNDSNSLPFIDRTP 320


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 743 NISPLHCTGP 772
           N+SPL CT P
Sbjct: 10  NVSPLQCTSP 19


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +3

Query: 534 HLHTSIAHHHIVRAHNHRYQYSVVL 608
           H+H +  HHH   A  H +Q+S  L
Sbjct: 425 HIHATPHHHHSHAATPH-HQHSTPL 448


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 277,747
Number of Sequences: 438
Number of extensions: 6471
Number of successful extensions: 24
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)