Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15o07f
(596 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical ... 36 0.017
U50312-5|AAA92322.1| 369|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr... 34 0.067
Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical pr... 33 0.20
AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical ... 33 0.20
AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical ... 33 0.20
Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical pr... 31 0.62
M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein ( C.ele... 31 0.62
AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical ... 29 1.9
Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical pr... 29 2.5
U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta p... 29 2.5
Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 28 4.4
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 28 4.4
U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical pr... 28 4.4
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 28 4.4
AL022289-3|CAA18371.1| 519|Caenorhabditis elegans Hypothetical ... 28 4.4
Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical p... 27 7.7
Z32682-2|CAA83611.1| 83|Caenorhabditis elegans Hypothetical pr... 27 7.7
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 27 7.7
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 27 7.7
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 27 7.7
AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical ... 27 7.7
AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical ... 27 7.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 7.7
>AF036687-2|AAB88311.2| 2224|Caenorhabditis elegans Hypothetical
protein C08G9.2 protein.
Length = 2224
Score = 36.3 bits (80), Expect = 0.017
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = +1
Query: 496 CTGNGDYEPLQCDDGLCWCANVKTGQ 573
C+ NG+Y+ QCD+ CWC + +G+
Sbjct: 1729 CSRNGNYDQTQCDNKRCWCVDELSGE 1754
Score = 34.7 bits (76), Expect = 0.051
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 439 CSRRRAEIEASGRKFVTLHCTGNGDYEPLQCDDGLCWCAN 558
C R+ ++ G+ + + C +G +E +QCD CWC +
Sbjct: 844 CLVRKTNLQKMGQMDL-IKCRPDGSFEQIQCDTEFCWCVD 882
Score = 33.9 bits (74), Expect = 0.088
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 301 CLPDGSFGPVQCKGDMFTGRCFCSDKDGNRIFG 399
C PDGSF +QC T C+C D++GN + G
Sbjct: 862 CRPDGSFEQIQCD----TEFCWCVDEEGNYVEG 890
Score = 33.5 bits (73), Expect = 0.12
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 490 LHCTGNGDYEPLQCDDGLCWCANVKTGQ 573
+ C G++E QCDD C+C ++ TG+
Sbjct: 576 MKCDRAGNFEQYQCDDEGCFCVDIATGE 603
Score = 33.1 bits (72), Expect = 0.15
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +1
Query: 496 CTGNGDYEPLQCDDGLCWCANVKTG 570
C NG + +QCD CWC +V G
Sbjct: 272 CERNGRFSSIQCDIQFCWCVDVHYG 296
Score = 30.7 bits (66), Expect = 0.82
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 289 PPSSCLPDGSFGPVQCKGDMFTGRCFCSDK 378
PP C P+G F QC D +C+C DK
Sbjct: 1496 PPVQCTPEGLFRKYQC--DARLNQCWCVDK 1523
>U50312-5|AAA92322.1| 369|Caenorhabditis elegans Hypothetical
protein B0222.5 protein.
Length = 369
Score = 34.7 bits (76), Expect = 0.051
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 8/99 (8%)
Frame = +1
Query: 301 CLPDGSFGPVQCKGDMFTGRCFCSDKDGNRI-FGQMWRNEASDMSCA-CSRRRAEIEASG 474
C +G + VQC + C+C + + N + C C ++ A G
Sbjct: 43 CNENGYYETVQCNSES----CYCVTPHTALVAYDTRTNNPKTAPKCGTCLVYLQKLFADG 98
Query: 475 ----RKFVTLHCTGNGDYEPLQCDD--GLCWCANVKTGQ 573
FV G GD+EP+QCD C+C + TG+
Sbjct: 99 DPPENSFVPKCDVGKGDFEPVQCDSKKNQCYCVDTNTGR 137
Score = 29.9 bits (64), Expect = 1.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +1
Query: 490 LHCTGNGDYEPLQCDDGLCWCANVKT 567
L C NG YE +QC+ C+C T
Sbjct: 41 LKCNENGYYETVQCNSESCYCVTPHT 66
>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
protein W01F3.3 protein.
Length = 2175
Score = 34.3 bits (75), Expect = 0.067
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = +1
Query: 439 CSRRRAEIEASGRK--FVTLHCTGNGDYEPLQCDDG--LCWCANVK 564
C RRRA +S + FV CT +GD+E +QC+ C+C N +
Sbjct: 348 CERRRASASSSSIRGGFVPA-CTASGDFERVQCETNGRQCFCVNTQ 392
>Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical
protein C33D3.3 protein.
Length = 312
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 433 CACSRRRAEIEASG-RKFVTLHCTGNGDYEPLQCDDGLCWCANVKTGQPTVTPV 591
CAC R ++I + G R+FV C N +CD+ CW N + +PT+ PV
Sbjct: 33 CAC-RTSSQITSEGVREFVCKTCKINEGIFTYKCDNCKCW--NKGSRKPTLHPV 83
>AF038609-2|AAK29794.1| 226|Caenorhabditis elegans Hypothetical
protein C54E4.2a protein.
Length = 226
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 496 CTGNGDYEPLQCDDGLCWCAN 558
C G Y+P QC DG CWC +
Sbjct: 169 CDLEGFYKPEQCHDGNCWCVD 189
>AF038609-1|AAO61425.1| 234|Caenorhabditis elegans Hypothetical
protein C54E4.2b protein.
Length = 234
Score = 32.7 bits (71), Expect = 0.20
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 496 CTGNGDYEPLQCDDGLCWCAN 558
C G Y+P QC DG CWC +
Sbjct: 177 CDLEGFYKPEQCHDGNCWCVD 197
>Z14092-9|CAA78474.1| 1429|Caenorhabditis elegans Hypothetical
protein R107.8 protein.
Length = 1429
Score = 31.1 bits (67), Expect = 0.62
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Frame = +1
Query: 157 CVHDATVSDCLAGE--VLAPNVHIFNC-CPACRLPG-----PTDPGD--GTECKPPSSCL 306
C VS C A E V + + C C C + G P+ P G +CK C
Sbjct: 60 CEQQCDVSKCGADEKCVFDKDYRMETCVCKDCDINGNSLLKPSCPSGYGGDDCKTQGWCY 119
Query: 307 PDGSFGPVQCKGDMFTGRCFCSDK-DGNRIFGQMWRNEASDMSCACSRR 450
P QC G +C C D G R ++ NE + AC R
Sbjct: 120 PSVCMNGGQCIGAGNRAKCACPDGFKGERC--ELDVNECEENKNACGNR 166
>M12069-1|AAA70191.1| 1429|Caenorhabditis elegans protein (
C.elegans homeotic lin-12 protein gene, complete cds. ).
Length = 1429
Score = 31.1 bits (67), Expect = 0.62
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 11/109 (10%)
Frame = +1
Query: 157 CVHDATVSDCLAGE--VLAPNVHIFNC-CPACRLPG-----PTDPGD--GTECKPPSSCL 306
C VS C A E V + + C C C + G P+ P G +CK C
Sbjct: 60 CEQQCDVSKCGADEKCVFDKDYRMETCVCKDCDINGNSLLKPSCPSGYGGDDCKTQGWCY 119
Query: 307 PDGSFGPVQCKGDMFTGRCFCSDK-DGNRIFGQMWRNEASDMSCACSRR 450
P QC G +C C D G R ++ NE + AC R
Sbjct: 120 PSVCMNGGQCIGAGNRAKCACPDGFKGERC--ELDVNECEENKNACGNR 166
>AL132862-2|CAB70224.1| 1019|Caenorhabditis elegans Hypothetical
protein Y73F8A.5 protein.
Length = 1019
Score = 29.5 bits (63), Expect = 1.9
Identities = 20/44 (45%), Positives = 21/44 (47%)
Frame = +1
Query: 232 CPACRLPGPTDPGDGTECKPPSSCLPDGSFGPVQCKGDMFTGRC 363
C AC PG + PG EC P C P GSF KG GRC
Sbjct: 268 CTACP-PGTSSPGGSAECIP---CSP-GSF---SSKGSGQCGRC 303
>Z35604-2|CAA84677.1| 809|Caenorhabditis elegans Hypothetical
protein ZK1058.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 226 NCCPACRLPGPTDPGDGTECK-PPSSCLPDGSFGPV-QCKGDMFTGRCFCSDK-DGNRIF 396
NC PG T G EC SCL + G + KG+ GRC C D DGNR
Sbjct: 585 NCGKCICAPGWT--GRACECPISTDSCL--SANGKICNGKGECICGRCRCFDSPDGNRYS 640
Query: 397 G 399
G
Sbjct: 641 G 641
>U19744-1|AAA85704.1| 809|Caenorhabditis elegans integrin beta
pat-3 protein.
Length = 809
Score = 29.1 bits (62), Expect = 2.5
Identities = 24/61 (39%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = +1
Query: 226 NCCPACRLPGPTDPGDGTECK-PPSSCLPDGSFGPV-QCKGDMFTGRCFCSDK-DGNRIF 396
NC PG T G EC SCL + G + KG+ GRC C D DGNR
Sbjct: 585 NCGKCICAPGWT--GRACECPISTDSCL--SANGKICNGKGECICGRCRCFDSPDGNRYS 640
Query: 397 G 399
G
Sbjct: 641 G 641
>Z72513-1|CAA96669.1| 260|Caenorhabditis elegans Hypothetical
protein T04F3.2 protein.
Length = 260
Score = 28.7 bits (61), Expect = 3.3
Identities = 19/72 (26%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Frame = +1
Query: 379 DGNRIFGQMWRNEASDMSCACSRRRA---EIEASGRKFVTLHCTGNGD-YEPLQCDDG-- 540
D N + + E + CA RR+A + + R ++ N Y+ +QC D
Sbjct: 35 DSNDLSVRQRFEEVIRLDCASQRRKALKRKTDGDARIYIPTCSPKNSLLYDKVQCYDVSI 94
Query: 541 LCWCANVKTGQP 576
CWC + +G+P
Sbjct: 95 YCWCVDELSGEP 106
>Z93393-7|CAB07694.1| 383|Caenorhabditis elegans Hypothetical
protein Y48E1B.8 protein.
Length = 383
Score = 28.3 bits (60), Expect = 4.4
Identities = 13/47 (27%), Positives = 19/47 (40%)
Frame = -3
Query: 465 FYFGSSSATCATHVTSFIPPHLSKYSVSIFIGTETPSCEHIAFALYW 325
F+F + TC S + +V + I PS + F LYW
Sbjct: 306 FHFVNPDGTCNNEKISSAKSRMENGTVEVQISKNLPSWGRLQFKLYW 352
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 235 PACRLPGPTDPGDGTECKPPSSCLPDGSFGPVQCKGDMFTGRCFCSD 375
P C P + T+C+P + CL D S +CK + C C +
Sbjct: 1419 PICSCPFGEQLVNKTKCEPENECL-DSSSCSQRCKDEKHGFTCSCDE 1464
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Frame = +1
Query: 133 SQCQVAQTCVHDATVSDCLAGEVLAPNVHI----FNCCPACRLP 252
+QCQ +C + S C A LAP H+ C P C+ P
Sbjct: 38 NQCQ--SSCQQNCQTSSCSASATLAPVQHVPQCQQQCAPQCQQP 79
>U23523-4|AAC46557.1| 83|Caenorhabditis elegans Hypothetical
protein F53A9.2 protein.
Length = 83
Score = 28.3 bits (60), Expect = 4.4
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 577 LAVPF*HLHTSIAHHHIVRAHNHRYQYSV 491
LA P H+HT HHH H+H + + +
Sbjct: 28 LAPPTVHVHTDGGHHHGHHHHHHSFLHEL 56
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 235 PACRLPGPTDPGDGTECKPPSSCLPDGSFGPVQCKGDMFTGRCFCSD 375
P C P + T+C+P + CL D S +CK + C C +
Sbjct: 1419 PICSCPFGEQLVNKTKCEPENECL-DSSSCSQRCKDEKHGFTCSCDE 1464
>AL022289-3|CAA18371.1| 519|Caenorhabditis elegans Hypothetical
protein ZK1225.4 protein.
Length = 519
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +2
Query: 230 VVLRVDYLARLIRAMVRSANHLLAVYLMVLLDQYNAKAICSQDGVSVPIK-METEYLDK- 403
VV R+DY+ R + + NH + +LL Q +A + Q+ + M+ + K
Sbjct: 42 VVQRLDYMWRTAETVEAARNHSAELVARLLLSQSSADNLKFQESADILYSLMDNNFEGKI 101
Query: 404 CGG 412
CGG
Sbjct: 102 CGG 104
>Z81486-10|CAB03993.3| 681|Caenorhabditis elegans Hypothetical
protein C53A5.13 protein.
Length = 681
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = -2
Query: 499 YSVVLQIFFPMLLFRLVFCYMRNSC 425
+ +++ + F M L LVFC++RNSC
Sbjct: 608 FLILILVIFLMCL--LVFCFLRNSC 630
>Z32682-2|CAA83611.1| 83|Caenorhabditis elegans Hypothetical
protein M04D8.2 protein.
Length = 83
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +3
Query: 78 IEDLDSVSIVFLLVLCGEFAVSSRANLCP 164
+ +D+ + ++ LCG+ A+ + ANLCP
Sbjct: 17 VSTMDAHTDKYVRTLCGKTAIRNIANLCP 45
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 503 PVQCSVTNFLP-DASISARLLLHAQLMSLASFRHICPNILFPSLSEQKHRPVNISPLHCT 327
P+ C +P A++S +L ++ + + SF + N L PS +E+K I+ +
Sbjct: 532 PISCYYIAIVPLPANVSLDILPKSEEIVMHSFSKVFTNNLLPSSAEEKRFFAYIAESYVQ 591
Query: 326 GPKE 315
P+E
Sbjct: 592 LPEE 595
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 503 PVQCSVTNFLP-DASISARLLLHAQLMSLASFRHICPNILFPSLSEQKHRPVNISPLHCT 327
P+ C +P A++S +L ++ + + SF + N L PS +E+K I+ +
Sbjct: 532 PISCYYIAIVPLPANVSLDILPKSEEIVMHSFSKVFTNNLLPSSAEEKRFFAYIAESYVQ 591
Query: 326 GPKE 315
P+E
Sbjct: 592 LPEE 595
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = -1
Query: 503 PVQCSVTNFLP-DASISARLLLHAQLMSLASFRHICPNILFPSLSEQKHRPVNISPLHCT 327
P+ C +P A++S +L ++ + + SF + N L PS +E+K I+ +
Sbjct: 567 PISCYYIAIVPLPANVSLDILPKSEEIVMHSFSKVFTNNLLPSSAEEKRFFAYIAESYVQ 626
Query: 326 GPKE 315
P+E
Sbjct: 627 LPEE 630
>AL032637-5|CAA21609.1| 245|Caenorhabditis elegans Hypothetical
protein Y43F8C.5 protein.
Length = 245
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +1
Query: 487 TLHCTGNGDYEPLQCDDGLCWC 552
+LHC G + EP CD+ WC
Sbjct: 138 SLHC-GASELEPSSCDEPNAWC 158
>AF045646-4|AAK29837.2| 295|Caenorhabditis elegans Hypothetical
protein F56B3.2b protein.
Length = 295
Score = 27.5 bits (58), Expect = 7.7
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Frame = +1
Query: 181 DCLAGEVL--APNVHIFNCCPA-CRLPGPTDPGDGTECKPPSSCLPDGSFGPVQCKGDMF 351
+C G+V A + +CCP C L TD SC PD + ++C D
Sbjct: 39 NCPMGQVCITAGESQVGHCCPVICPLNTTTDTR--------YSCDPDAA-PALKCPSD-- 87
Query: 352 TGRCFCSDKDGNRI--FGQMWRNEASDMSCACSRRRAEIEASGRKFVTLHCTGNGDYEPL 525
+ C+ + N+I F ++ S AC RR A +V HC G
Sbjct: 88 SHYCYFLSGNFNKIQNFICNANSDGSFSQAACCRRPCNAMAPNALYVDYHCMPRGQLNSA 147
Query: 526 QCDDGLC 546
+ C
Sbjct: 148 CTSNAQC 154
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.5 bits (58), Expect = 7.7
Identities = 17/61 (27%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Frame = +1
Query: 193 GEVLAPNVHIFNCCP--ACRLPGPTDPGDGTECKPPSSCLPDGSFGPVQCKGDMFTGRCF 366
G V AP CCP P P P + P+ C +G C+ G C
Sbjct: 120 GGVPAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGSQPYGRTPCRSGCPNGDCG 179
Query: 367 C 369
C
Sbjct: 180 C 180
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,334,300
Number of Sequences: 27780
Number of extensions: 366056
Number of successful extensions: 1218
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1103
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1213
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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