Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15o03f
(600 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0011 - 7337618-7338496,7338596-7338991 42 5e-04
04_04_0619 + 26652923-26653267,26653440-26654273 38 0.005
01_01_1152 + 9170628-9171899 37 0.014
01_06_0824 - 32243495-32244319,32244449-32244859 33 0.13
11_02_0012 - 7346282-7347136,7347234-7347593 33 0.23
05_06_0044 - 25150322-25151260 33 0.23
03_05_0294 + 22855503-22855946,22856346-22856399 31 0.93
08_02_0531 + 18256597-18256836,18257637-18257735,18258038-182581... 30 1.6
01_06_0887 + 32733300-32734565 29 2.2
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 29 3.8
08_01_0002 - 20208-20594,21525-21671,21754-21917,22005-22162,245... 28 5.0
01_01_1157 - 9203448-9203560,9204725-9204768,9205345-9205433,920... 28 5.0
06_03_0353 + 19810945-19810975,19811308-19811369,19811741-198118... 28 6.6
04_03_0616 - 18052596-18053779,18053935-18054099,18056236-180562... 28 6.6
02_04_0632 + 24614659-24615528,24615636-24616133 28 6.6
07_03_1280 + 25434933-25436153 27 8.7
07_01_0731 - 5566878-5567513 27 8.7
03_01_0085 + 690618-691012,691114-691193,691775-691959,692363-69... 27 8.7
02_02_0253 - 8325437-8325628,8325705-8325779,8325933-8326037,832... 27 8.7
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 41.5 bits (93), Expect = 5e-04
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 5/136 (3%)
Frame = +3
Query: 195 LDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIP--DD--DTIRXXXXXXXXXX 362
+ KN+V SP S LAL+ G +ELL LG DD +++R
Sbjct: 27 VSSNKNLVFSPASLYAALALVAAGARGTTLDELLALLGAASLDDLEESVRRAVEVGLADE 86
Query: 363 XXIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFD-NGAAAAGLINKWVE 539
G + A ++ E EL P + A + A NF + INKWV
Sbjct: 87 SASGGPRVSDACGVWHDE-TLELKPAYRAAAAGTYKAVTRAANFQRQPKRSRKKINKWVS 145
Query: 540 NKTNERIKDLLSEDSL 587
TN+ I ++L + S+
Sbjct: 146 KATNKLIPEILPDGSV 161
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 38.3 bits (85), Expect = 0.005
Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 1/136 (0%)
Frame = +3
Query: 195 LDKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDTIRXXXXXXXXXXXXIK 374
+ ++ N + SPL LAL+ GT +LL LG +
Sbjct: 16 ITEQSNFMFSPLGLRAGLALLATGTDGETLRQLLAFLGSQHIHQLNAASAGLLAEMRAWP 75
Query: 375 GVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGA-AAAGLINKWVENKTN 551
++F A I++ + L P+ + A A V+F N A AAA +N+++ TN
Sbjct: 76 QLSF--AAGIFV-DRSLRLRPEFQSTAAAAHGAFPRSVDFQNQANAAAAEVNRFISQATN 132
Query: 552 ERIKDLLSEDSLDSFT 599
R+ + +S + S T
Sbjct: 133 GRLNNTISPGTFGSST 148
>01_01_1152 + 9170628-9171899
Length = 423
Score = 36.7 bits (81), Expect = 0.014
Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Frame = +3
Query: 207 KNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPD-DDTIRXXXXXXXXXXXXIKGVT 383
+N + SPLS LAL+ G ELL LG P + R + +
Sbjct: 59 RNFIVSPLSFHAALALVADGARGETQRELLGFLGSPSLAELHRSPTTRLVARLRHLPNTS 118
Query: 384 FNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNF-DNGAAAAGLINKWVENKTNERI 560
F A +++ G L P+ A + A E +F A +N +V + T I
Sbjct: 119 F--ACGVWVDRG-RALTPEFADAAASRYAAVAEPADFATQPEQARERVNAFVSDATEGLI 175
Query: 561 KDLLSEDSLDSFT 599
+D+L +S+DS T
Sbjct: 176 RDVLPPNSVDSST 188
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 33.5 bits (73), Expect = 0.13
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 9/140 (6%)
Frame = +3
Query: 207 KNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPD--------DDTIRXXXXXXXXXX 362
KN+ SPLS LAL+ G ++++ LG
Sbjct: 32 KNLAVSPLSLHAALALLGAGARGETLDQIIAFLGPAGGPAHAALASHVALCSLADDSGPG 91
Query: 363 XXIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNF-DNGAAAAGLINKWVE 539
G AN +++ + L + + + A+ V+F D A IN+W E
Sbjct: 92 DDRGGPKVRFANGVWV-DAALRLKAAYARVVADKYRAEARPVSFRDKLEEARREINEWFE 150
Query: 540 NKTNERIKDLLSEDSLDSFT 599
+ T RIKD L +D++D T
Sbjct: 151 SATAGRIKDFLPKDAVDRAT 170
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 32.7 bits (71), Expect = 0.23
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 4/138 (2%)
Frame = +3
Query: 198 DKKKNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIP--DD--DTIRXXXXXXXXXXX 365
+ +NVV SP+S LAL+ G +EL+ LG DD +++R
Sbjct: 28 NSNRNVVFSPVSLYAALALVASGARGTTLDELVALLGAASLDDLEESVRRAVEVGLADES 87
Query: 366 XIKGVTFNVANKIYIKEGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENK 545
G + A ++ E L P + ADF++ ++ INKWV
Sbjct: 88 ESGGPRVSYACGVWHDE-RLALKPAYRA-------ADFQR----QPKSSRKKINKWVSKA 135
Query: 546 TNERIKDLLSEDSLDSFT 599
TN+ I+++L + S+ T
Sbjct: 136 TNKLIREILPDGSVHGGT 153
>05_06_0044 - 25150322-25151260
Length = 312
Score = 32.7 bits (71), Expect = 0.23
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 414 EGDYELDPKLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLD 590
+ L+P A VF A N AAA IN+W ++T +KD+LS +S+D
Sbjct: 6 DASLRLNPAFADTAASVFKAAVRSAG--NPAAARAEINEWFSSQTGGFVKDILS-NSID 61
>03_05_0294 + 22855503-22855946,22856346-22856399
Length = 165
Score = 30.7 bits (66), Expect = 0.93
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 210 NVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIPDDDT 326
NV SPLS L+L+ G ++L++ LG+P T
Sbjct: 45 NVAFSPLSLHVALSLVAAGAGGATRDQLVSLLGVPGRGT 83
>08_02_0531 +
18256597-18256836,18257637-18257735,18258038-18258184,
18258295-18258427,18258521-18258585,18258792-18258962,
18259095-18259199,18259495-18259602,18259792-18260088,
18260191-18260256,18260477-18260679,18261178-18261232,
18261318-18261503,18261701-18261985
Length = 719
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +3
Query: 369 IKGVTFNVANKIYIKEGDYELDPK-LKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENK 545
IK ++FN + KEG E P+ ++++ V+ + K N G A+ G+ + +
Sbjct: 98 IKALSFNYVAMLKEKEGALERSPRGVQRNTVQDNPLNVSKQNGYGGGASQGIQPNGLHSM 157
Query: 546 TNERIKDLLSED 581
T R D+ D
Sbjct: 158 TGHRKADISEGD 169
>01_06_0887 + 32733300-32734565
Length = 421
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 381 TFNVANKIYIKEGDYELDPKLKK--DAVEVFDADFEKVNFDNGAAAAGLIN 527
TFN+ N+I ++ EL P+ K + ++ A F +G AGLIN
Sbjct: 123 TFNLPNRIQLEREALELAPEEKPLLHRLVIYTATLSSDPFMDGCVVAGLIN 173
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 207 KNVVSSPLSAEYLLALITLGTTDPAHEELLTSLGIP 314
+NV SPLS L+L+ G ++L ++LG P
Sbjct: 35 RNVAFSPLSLHVALSLVAAGAGGATRDQLASALGGP 70
>08_01_0002 -
20208-20594,21525-21671,21754-21917,22005-22162,
24533-24826,24916-25121,25216-25812,26366-27097
Length = 894
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = -2
Query: 542 IFNPFVY*AGGCGSVIEVNFFKICIEYLDSVLLKFWVELI----VTLLDVYFV 396
+ +PF+ A G + ++ F C +L +LLKFWV+L+ VT VYF+
Sbjct: 733 LISPFLVTANG---MFVIDLF--CTWFLGLLLLKFWVKLVHWTTVTPFLVYFI 780
>01_01_1157 -
9203448-9203560,9204725-9204768,9205345-9205433,
9205565-9205609,9205805-9205912,9206003-9206088,
9206492-9206579,9206725-9206910,9207181-9207256,
9207332-9207381,9207715-9207777,9207882-9207962,
9208028-9208130,9208246-9208348,9208489-9208549,
9209059-9209154,9209185-9209225,9209848-9209922,
9210412-9210562
Length = 552
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Frame = -3
Query: 376 PFIDF--NFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNG 224
PF+ F +DD +++R V+S I +SCAGSV+ + ++ +K D G
Sbjct: 84 PFLYFMVQYDDILFHEKRRVTSVTIDFTFGLNSCAGSVI-RDLHIAKQEEDIG 135
>06_03_0353 +
19810945-19810975,19811308-19811369,19811741-19811813,
19813292-19813359,19813496-19813565,19813908-19813976,
19814065-19814136,19814247-19814320,19814420-19814697,
19814804-19815188,19815268-19815393,19815583-19815687,
19815986-19815994,19817040-19817114,19817202-19817390
Length = 561
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +3
Query: 438 KLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDSFT 599
K +DA+ V D V+ ++ AA GL+ + K + DL+++ ++D+ T
Sbjct: 128 KALEDALAVLDKIAMHVDVNDRAAMLGLVKSSIGTKFTGQFGDLIADLAIDATT 181
>04_03_0616 -
18052596-18053779,18053935-18054099,18056236-18056260,
18057259-18057312,18057354-18057619,18058633-18059371
Length = 810
Score = 27.9 bits (59), Expect = 6.6
Identities = 19/71 (26%), Positives = 30/71 (42%)
Frame = -3
Query: 298 VNSSSCAGSVVPKVINASKYSADNGDDTTFFFLSSSLQNFAENLVIAEDKAFESILRTGF 119
V+ ++ A P V N S NG +SSS N + D + ++ T +
Sbjct: 7 VDCNNTANGFKPFVGNVEVISLSNGQARVMNHVSSSCYNRTSRQMNPADVWYLNLTGTPY 66
Query: 118 FISNSVNSITV 86
+S+S N TV
Sbjct: 67 RLSDSANKFTV 77
>02_04_0632 + 24614659-24615528,24615636-24616133
Length = 455
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Frame = -3
Query: 307 PRLVNSSSCAGSVVPKVINASKYSA----DNGDD 218
P L+ +G+ PK+ NAS Y+A DNGDD
Sbjct: 75 PSLMGFVLISGTQFPKINNASAYAAADPGDNGDD 108
>07_03_1280 + 25434933-25436153
Length = 406
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/64 (26%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = -3
Query: 226 GDDTTFFFLSSSLQNFAENLVIAEDKAFESILRTG-------FFISNSVNSITVKIN*KF 68
GDD T +FLS S A N+ + + + S + G +F+SNS + +++ +
Sbjct: 216 GDDETVYFLSKSGDVMATNMQRSASRQYSSAVTCGDGGEAVAYFLSNSGAVVACELSRRA 275
Query: 67 YLDL 56
+ +L
Sbjct: 276 FAEL 279
>07_01_0731 - 5566878-5567513
Length = 211
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 429 LDPKLKKDAVEVFDADFEKVNFDNG 503
LD D VE+ DADFE +FD+G
Sbjct: 95 LDYVYDDDDVELVDADFEDGSFDDG 119
>03_01_0085 +
690618-691012,691114-691193,691775-691959,692363-693320,
693391-693518,693951-694010,694113-694163,694704-694821,
694990-695915,695916-697707,697810-697943,698029-698526
Length = 1774
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = -3
Query: 370 IDFNFDDTAENDERIVSSSGIPRLVNSSSCAGSVVPKVINASKYSADNGDDT 215
+D + D E+D+ + + R VN + V P + S S NGD T
Sbjct: 639 VDSHMDPDYESDDEFGNKKAVERSVNWARSDPFVSPVKVKYSNSSQKNGDAT 690
>02_02_0253 -
8325437-8325628,8325705-8325779,8325933-8326037,
8326249-8326374,8326451-8326835,8326931-8327208,
8327294-8327367,8327476-8327547,8327637-8327705,
8340132-8340201,8340806-8340873,8341571-8341643,
8341807-8341868,8342168-8342198
Length = 559
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 438 KLKKDAVEVFDADFEKVNFDNGAAAAGLINKWVENKTNERIKDLLSEDSLDSFT 599
K DA+ V D V+ D+ A GL+ + K + DL+++ ++D+ T
Sbjct: 128 KALDDALSVLDKIAIPVDVDDRVAMLGLVKSSIGTKFTGQFGDLIADLAIDATT 181
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,802,001
Number of Sequences: 37544
Number of extensions: 253792
Number of successful extensions: 623
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 621
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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