Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15n17f
(559 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphat... 66 6e-11
BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine phosph... 66 6e-11
BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein. 66 6e-11
BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine phosph... 66 6e-11
Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open readin... 40 0.008
AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open read... 40 0.008
Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open readin... 39 0.010
BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open read... 39 0.010
AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open read... 39 0.010
U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer... 36 0.096
D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer... 36 0.096
BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha) tran... 36 0.096
L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding pro... 31 2.1
J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein. 31 2.1
BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding p... 31 2.1
BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding p... 30 6.3
BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding p... 30 6.3
AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetic... 30 6.3
AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetic... 30 6.3
>M83738-1|AAA60226.1| 593|Homo sapiens protein-tyrosine phosphatase
protein.
Length = 593
Score = 66.5 bits (155), Expect = 6e-11
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +1
Query: 385 LSEGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVHTVSAPQLGAHVPRSSL 558
L +G +PA+LKKVLIV AP+WF+ P+ I+ L +++K+RER+ + ++ H+PR L
Sbjct: 174 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECL 231
>BT007405-1|AAP36073.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 66.5 bits (155), Expect = 6e-11
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +1
Query: 385 LSEGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVHTVSAPQLGAHVPRSSL 558
L +G +PA+LKKVLIV AP+WF+ P+ I+ L +++K+RER+ + ++ H+PR L
Sbjct: 174 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECL 231
>BC071574-1|AAH71574.1| 583|Homo sapiens PTPN9 protein protein.
Length = 583
Score = 66.5 bits (155), Expect = 6e-11
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +1
Query: 385 LSEGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVHTVSAPQLGAHVPRSSL 558
L +G +PA+LKKVLIV AP+WF+ P+ I+ L +++K+RER+ + ++ H+PR L
Sbjct: 164 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECL 221
>BC010863-1|AAH10863.1| 593|Homo sapiens protein tyrosine
phosphatase, non-receptor type 9 protein.
Length = 593
Score = 66.5 bits (155), Expect = 6e-11
Identities = 26/58 (44%), Positives = 42/58 (72%)
Frame = +1
Query: 385 LSEGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVHTVSAPQLGAHVPRSSL 558
L +G +PA+LKKVLIV AP+WF+ P+ I+ L +++K+RER+ + ++ H+PR L
Sbjct: 174 LLKGAFPARLKKVLIVGAPIWFRVPYSIISLLLKDKVRERIQILKTSEVTQHLPRECL 231
>Z97053-5|CAI19685.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 388 SEGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRER--VHTVSAPQLGAHVPRSSL 558
++ G+P ++K V +V P FK F I++ F++EK+ R +H L ++PRS L
Sbjct: 178 TQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 236
>AL132772-8|CAI18860.1| 279|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 279
Score = 39.5 bits (88), Expect = 0.008
Identities = 20/59 (33%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Frame = +1
Query: 388 SEGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRER--VHTVSAPQLGAHVPRSSL 558
++ G+P ++K V +V P FK F I++ F++EK+ R +H L ++PRS L
Sbjct: 178 TQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 236
>Z97053-6|CAI19686.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 39.1 bits (87), Expect = 0.010
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRER--VHTVSAPQLGAHVPRSSL 558
+ G+P ++K V +V P FK F I++ F++EK+ R +H L ++PRS L
Sbjct: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
>BC003071-1|AAH03071.2| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 39.1 bits (87), Expect = 0.010
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRER--VHTVSAPQLGAHVPRSSL 558
+ G+P ++K V +V P FK F I++ F++EK+ R +H L ++PRS L
Sbjct: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
>AL132772-9|CAI18861.1| 342|Homo sapiens chromosome 20 open reading
frame 121 protein.
Length = 342
Score = 39.1 bits (87), Expect = 0.010
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRER--VHTVSAPQLGAHVPRSSL 558
+ G+P ++K V +V P FK F I++ F++EK+ R +H L ++PRS L
Sbjct: 213 QDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFFLHGSDLNSLHTNLPRSIL 270
>U21938-1|AAA64309.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 35.9 bits (79), Expect = 0.096
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +1
Query: 400 YPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVH 510
+P K++ + ++ P+ F A F +++ F+ EK++ER+H
Sbjct: 187 FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIH 223
>D49488-1|BAA08449.1| 278|Homo sapiens alpha-tocopherol transfer
protein protein.
Length = 278
Score = 35.9 bits (79), Expect = 0.096
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +1
Query: 400 YPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVH 510
+P K++ + ++ P+ F A F +++ F+ EK++ER+H
Sbjct: 187 FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIH 223
>BC058000-1|AAH58000.1| 278|Homo sapiens tocopherol (alpha)
transfer protein protein.
Length = 278
Score = 35.9 bits (79), Expect = 0.096
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +1
Query: 400 YPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERVH 510
+P K++ + ++ P+ F A F +++ F+ EK++ER+H
Sbjct: 187 FPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKERIH 223
>L34219-1|AAA65123.1| 317|Homo sapiens retinaldehyde-binding
protein protein.
Length = 317
Score = 31.5 bits (68), Expect = 2.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ K + + P +F + +++ F++ KL ERV
Sbjct: 228 QDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERV 266
>J04213-1|AAA60251.1| 317|Homo sapiens RLBP1 protein.
Length = 317
Score = 31.5 bits (68), Expect = 2.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ K + + P +F + +++ F++ KL ERV
Sbjct: 228 QDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERV 266
>BC004199-1|AAH04199.1| 317|Homo sapiens retinaldehyde binding
protein 1 protein.
Length = 317
Score = 31.5 bits (68), Expect = 2.1
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ K + + P +F + +++ F++ KL ERV
Sbjct: 228 QDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERV 266
>BC101377-1|AAI01378.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ + V P + A + ++R F++EK R+R+
Sbjct: 188 QDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRI 226
>BC101376-1|AAI01377.1| 327|Homo sapiens retinaldehyde binding
protein 1-like 2 protein.
Length = 327
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ + V P + A + ++R F++EK R+R+
Sbjct: 188 QDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRI 226
>AL591428-3|CAI12307.1| 181|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 181
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ + V P + A + ++R F++EK R+R+
Sbjct: 42 QDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRI 80
>AL591428-2|CAI12306.1| 327|Homo sapiens protein ( to hypothetical
proteins from ).).
Length = 327
Score = 29.9 bits (64), Expect = 6.3
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +1
Query: 391 EGGYPAKLKKVLIVTAPLWFKAPFRILRLFVREKLRERV 507
+ +PA+ + V P + A + ++R F++EK R+R+
Sbjct: 188 QDSFPARFGGIHFVNQPWYIHALYTVIRPFLKEKTRKRI 226
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,970,927
Number of Sequences: 237096
Number of extensions: 1226245
Number of successful extensions: 2435
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2435
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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