Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15n10r
         (645 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    77   2e-16
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   0.47 
S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor prot...    22   5.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   7.7  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 76.6 bits (180), Expect = 2e-16
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 16/189 (8%)
 Frame = -2

Query: 599 TSFNQRXILSAAHCPYGDXTGRWRIRVG-----STFANSGGVVHNVNRIIIHPNYNRRTA 435
           T  ++R +L+AAHC   + T +  I VG     S    +  V+H++N++IIHP Y+    
Sbjct: 191 TIISKRYVLTAAHCIIDENTTKLAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEK 250

Query: 434 D----SDLCILRSNSNIAYNNNVRPINIAGANY-NLGDNQVVWAAGWGATSLGGSNSEQL 270
           D    +D+ +L++  +I + + V P  +   ++ +      V   GWG TS  G  S  L
Sbjct: 251 DDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSFAGSDVTVLGWGHTSFNGMLSHIL 310

Query: 269 RHVQVWTINQNACVQRYRPINRAITANMLCSGVLDVGGRDQCQGDSGGPLLHNR------ 108
           +   +  + Q  C + Y      I  N +C+      G+D CQ DSGGP+L         
Sbjct: 311 QKTTLNMLTQVECYKYY----GNIMVNAMCA---YAKGKDACQMDSGGPVLWQNPRTKRL 363

Query: 107 VLVGVCSWG 81
           V +G+ SWG
Sbjct: 364 VNIGIISWG 372


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
            protein.
          Length = 1308

 Score = 25.4 bits (53), Expect = 0.47
 Identities = 22/73 (30%), Positives = 33/73 (45%)
 Frame = +3

Query: 315  SSPNNLVITKIVIGTSNINRTNVVVISYVGITA*DAEVTVSSTSVIVGMNDNSVHVMHNT 494
            ++  ++V+T +   T+ IN     VIS  G T     +  SSTS+      NS+ V  + 
Sbjct: 825  TTEQSVVVTNV---TTTINTPTTSVISMSGTTVPITSLPASSTSI------NSITVEKDV 875

Query: 495  PTVGKGGTNTNTP 533
                K    TNTP
Sbjct: 876  INDVKTQITTNTP 888


>S76959-1|AAB33934.1|   85|Apis mellifera olfactory receptor
           protein.
          Length = 85

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/29 (27%), Positives = 19/29 (65%)
 Frame = +3

Query: 312 TSSPNNLVITKIVIGTSNINRTNVVVISY 398
           +S+  N ++  +++GT  I  + +++ISY
Sbjct: 2   SSTEANELVMSVIVGTVVIVSSLIILISY 30


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 527 IRVGSTFANSGGVVHNVNRIIIHPNYN 447
           +R  S   N GGV H  N  + H N++
Sbjct: 261 VRRDSRRKNYGGVYHLDNHHVHHANHH 287


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,667
Number of Sequences: 438
Number of extensions: 4176
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19438227
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)