Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15n04f
(633 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase... 83 1e-16
U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase... 83 1e-16
Z82259-2|CAB05129.1| 474|Caenorhabditis elegans Hypothetical pr... 78 6e-15
AF067937-2|AAF99916.1| 381|Caenorhabditis elegans Choline kinas... 65 3e-11
Z34533-6|CAA84300.2| 371|Caenorhabditis elegans Hypothetical pr... 52 3e-07
AY158690-1|AAN41642.1| 371|Caenorhabditis elegans choline kinas... 52 3e-07
Z34533-7|CAA84301.2| 369|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AY158691-1|AAN41643.1| 369|Caenorhabditis elegans choline kinas... 48 4e-06
Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical pr... 45 5e-05
Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 29 2.8
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 29 2.8
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 29 2.8
U58757-10|AAK66020.1| 66|Caenorhabditis elegans Histone h1 lik... 27 8.4
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 27 8.4
AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen pro... 27 8.4
>U64598-12|AAX88835.1| 408|Caenorhabditis elegans Choline kinase a
protein 2, isoformb protein.
Length = 408
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 421 EPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLL 600
EP KVLLR+Y E +V ESVIFTLLSER LGPKL+G+FSGGR+EEYIP+RPL
Sbjct: 83 EPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLS 139
Query: 601 TRELA 615
E++
Sbjct: 140 CHEIS 144
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +1
Query: 154 TEAEMREVAARICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALPE-------DPSK 312
T E++E A +C +L GAWK+V L RI GG+SN L+ L E +P+K
Sbjct: 27 TIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNK 86
Query: 313 LCTFTKRESSPETELETAASKLV 381
+ + +PETE A ++
Sbjct: 87 V--LLRVYFNPETESHLVAESVI 107
>U64598-11|AAK39220.1| 429|Caenorhabditis elegans Choline kinase a
protein 2, isoforma protein.
Length = 429
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +1
Query: 421 EPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLL 600
EP KVLLR+Y E +V ESVIFTLLSER LGPKL+G+FSGGR+EEYIP+RPL
Sbjct: 104 EPNKVLLRVYFNPETE---SHLVAESVIFTLLSERHLGPKLYGIFSGGRLEEYIPSRPLS 160
Query: 601 TRELA 615
E++
Sbjct: 161 CHEIS 165
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Frame = +1
Query: 154 TEAEMREVAARICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALPE-------DPSK 312
T E++E A +C +L GAWK+V L RI GG+SN L+ L E +P+K
Sbjct: 48 TIPELKERAHMLCARFLGGAWKTVPLEHLRISRIKGGMSNMLFLCRLSEVYPPIRNEPNK 107
Query: 313 LCTFTKRESSPETELETAASKLV 381
+ + +PETE A ++
Sbjct: 108 V--LLRVYFNPETESHLVAESVI 128
>Z82259-2|CAB05129.1| 474|Caenorhabditis elegans Hypothetical
protein C28D4.2 protein.
Length = 474
Score = 77.8 bits (183), Expect = 6e-15
Identities = 38/70 (54%), Positives = 52/70 (74%)
Frame = +1
Query: 421 EPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLL 600
EP+K LLR VH + +D +++ESV+FTLLSER LGPK+ GVF GGR E++IP+R L
Sbjct: 140 EPEKALLR----VHCQSDIDQLLSESVVFTLLSERNLGPKMLGVFPGGRFEQFIPSRALQ 195
Query: 601 TRELAEPALS 630
E+++P LS
Sbjct: 196 CLEISKPGLS 205
Score = 44.0 bits (99), Expect = 9e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +1
Query: 187 ICRNYLHGAWKSVDPTELEFRRISGGLSNFLYYVALP 297
+C YL GAW+ V E R I+GG+SN L+ V LP
Sbjct: 95 LCAKYLGGAWRKVKIEEFRIRAITGGMSNLLFLVELP 131
>AF067937-2|AAF99916.1| 381|Caenorhabditis elegans Choline kinase b
protein 4 protein.
Length = 381
Score = 65.3 bits (152), Expect = 3e-11
Identities = 34/94 (36%), Positives = 56/94 (59%)
Frame = +1
Query: 349 TELETAASKLVKKSMARSNSFSIEEPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERR 528
T++ S ++ + + S S + P L+RI+ Q A + TE+V+F++LSER
Sbjct: 46 TQITGGQSNILYLATSASTKLSPDTPSCFLIRIHRQ-----APSQVFTETVVFSVLSERG 100
Query: 529 LGPKLHGVFSGGRIEEYIPARPLLTRELAEPALS 630
LGPKL+G F GGR+EE++P+R L + P ++
Sbjct: 101 LGPKLYGFFPGGRLEEFLPSRTLDVDSIKLPEIA 134
Score = 33.1 bits (72), Expect = 0.17
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 196 NYLHGAWKSVDPTELEFRRISGGLSNFLY 282
+YL G W V+ +E+ +I+GG SN LY
Sbjct: 29 DYLRGGWALVEKSEVTVTQITGGQSNILY 57
>Z34533-6|CAA84300.2| 371|Caenorhabditis elegans Hypothetical
protein B0285.8 protein.
Length = 371
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +1
Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
LLRI+ Q MD +V F + SER LGPKL+G F GGR+EE++P+R L + +
Sbjct: 68 LLRIHRQGPSHVFMD-----TVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTLDSDCIL 122
Query: 616 EPALS 630
+P +S
Sbjct: 123 DPEIS 127
>AY158690-1|AAN41642.1| 371|Caenorhabditis elegans choline kinase
CKB-1 protein.
Length = 371
Score = 52.4 bits (120), Expect = 3e-07
Identities = 29/65 (44%), Positives = 41/65 (63%)
Frame = +1
Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
LLRI+ Q MD +V F + SER LGPKL+G F GGR+EE++P+R L + +
Sbjct: 68 LLRIHRQGPSHVFMD-----TVNFAIFSERGLGPKLYGFFDGGRMEEFLPSRTLDSDCIL 122
Query: 616 EPALS 630
+P +S
Sbjct: 123 DPEIS 127
>Z34533-7|CAA84301.2| 369|Caenorhabditis elegans Hypothetical
protein B0285.9 protein.
Length = 369
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +1
Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
LLRI+ Q + + T++V + SER LGPKL+G F GGR+EE++P++ ++
Sbjct: 68 LLRIHRQPPSQ-----VFTDTVNLAIFSERGLGPKLYGFFEGGRMEEFLPSKTFDVNDVL 122
Query: 616 EP 621
P
Sbjct: 123 VP 124
>AY158691-1|AAN41643.1| 369|Caenorhabditis elegans choline kinase
CKB-2 protein.
Length = 369
Score = 48.4 bits (110), Expect = 4e-06
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +1
Query: 436 LLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELA 615
LLRI+ Q + + T++V + SER LGPKL+G F GGR+EE++P++ ++
Sbjct: 68 LLRIHRQPPSQ-----VFTDTVNLAIFSERGLGPKLYGFFEGGRMEEFLPSKTFDVNDVL 122
Query: 616 EP 621
P
Sbjct: 123 VP 124
>Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 490 TESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELAEPALS 630
T+ V F + SER LGPKL+G F GR+EE++P+ L ++ +S
Sbjct: 81 TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTLKLNDVLNTEIS 127
>Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = +1
Query: 490 TESVIFTLLSERRLGPKLHGVFSGGRIEEYIPARPLLTRELAEPALS 630
T+ V F + SER LGPKL+G F GR+EE++P+ L ++ +S
Sbjct: 81 TDIVNFAIFSERGLGPKLYGFFEEGRMEEFLPSVTLKLNDVLNTEIS 127
>Z19158-1|CAA79574.1| 788|Caenorhabditis elegans Hypothetical
protein T23G5.1 protein.
Length = 788
Score = 30.7 bits (66), Expect = 0.91
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +1
Query: 376 LVKKSMARSNSFSIEEPKKVLLRIYGQVHGERAMDAIVTESVIFTLLSERRLGPKLHGVF 555
L + + + N +E P+++L+R+ +HG+ AI T + L+SER + +F
Sbjct: 157 LERSYLLKINKEIVERPQQMLMRVSIGIHGDDITSAIET----YNLMSERYMTHASPTLF 212
Query: 556 SGGRIEEYIPARPLLT 603
+ G + + LLT
Sbjct: 213 NSGTCRPQMSSCFLLT 228
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 226 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETAASKLV 381
+P E+E R+SG S+ +Y E S L ++ E+ +P + A+S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 226 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETAASKLV 381
+P E+E R+SG S+ +Y E S L ++ E+ +P + A+S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 226 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETAASKLV 381
+P E+E R+SG S+ +Y E S L ++ E+ +P + A+S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +1
Query: 226 DPTELEFRRISGGLSNFLYYVALPEDPSKLCTFTKRES-SPETELETAASKLV 381
+P E+E R+SG S+ +Y E S L ++ E+ +P + A+S+ V
Sbjct: 68 NPDEIEVSRVSGRDSSLAFYTTAHETSSMLSRDSRDETLTPNEHIHQASSRRV 120
>U58757-10|AAK66020.1| 66|Caenorhabditis elegans Histone h1 like
protein 7, isoformb protein.
Length = 66
Score = 27.5 bits (58), Expect = 8.4
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +1
Query: 289 ALPEDPSKLCTFTKRESSPETELETAASKLVKKSMARSNSFSIEEPKK 432
A P+ P F K ++SP+ A K VKK+ A+ + PKK
Sbjct: 18 AKPKAPKVKKYFLKIQASPKKAAAPKAKKPVKKAAAKKSPAKKAAPKK 65
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 319 TFTKRESSPETELETAASKLVKKSMARSNSFSIEEPKKV 435
T TK ++P TE E ++ K KK A + S KKV
Sbjct: 186 TETKNSTTPSTEKEKSSMKKTKKEAAVATGTSGSAKKKV 224
>AC006790-10|AAF60736.1| 371|Caenorhabditis elegans Collagen
protein 71 protein.
Length = 371
Score = 27.5 bits (58), Expect = 8.4
Identities = 18/61 (29%), Positives = 24/61 (39%)
Frame = +3
Query: 363 GGQ*ASQEIDGQIEFFQHRRTKEGIAQDIRPGPRREGHGRDRDGICHIHFALREEAGPEA 542
GG A+ E+ G + K +A + GP G D +G CH L GP
Sbjct: 124 GGDAAAAEVKGNSPAAAYE-DKPFVAVGVEEGPHTATTGSDSEGTCH-DCCLPGPPGPPG 181
Query: 543 P 545
P
Sbjct: 182 P 182
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,584,768
Number of Sequences: 27780
Number of extensions: 262683
Number of successful extensions: 846
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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