Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15m20r
         (842 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    23   4.7  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   6.2  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   6.2  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   8.1  
DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.              22   8.1  
AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1al...    22   8.1  

>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -3

Query: 318 FIYYYFRSEV*IVKISLNLSTVLNIPINK 232
           FI+ YF S V   + ++ L  VL  P  K
Sbjct: 22  FIFLYFNSLVRFRRFTIELDKVLESPRGK 50


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = +1

Query: 220 CHLHLIYRYIQNCTQI*TYLNNSYFASEVIINEWVQFIGQLLQLVN 357
           CH    Y  +       T   N     +V+I+ WV F+   +  VN
Sbjct: 463 CHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVN 508


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/46 (26%), Positives = 18/46 (39%)
 Frame = +1

Query: 220 CHLHLIYRYIQNCTQI*TYLNNSYFASEVIINEWVQFIGQLLQLVN 357
           CH    Y  +       T   N     +V+I+ WV F+   +  VN
Sbjct: 463 CHADDAYMVVDTPFLASTTTTNDIKMQKVLIDFWVSFVNNGVPNVN 508


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 217 IDLYIFGHV*INSKKFYKYLLNDCGGI 137
           I++ + GHV         +L+  CGGI
Sbjct: 8   INIVVIGHVDSGKSTTTGHLIYKCGGI 34


>DQ435334-1|ABD92649.1|  135|Apis mellifera OBP17 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 436 VSAIIEFIFKYFTVN 392
           +S I+E  FKY T+N
Sbjct: 116 ISKILECFFKYKTIN 130


>AF015267-1|AAC38959.1|  461|Apis mellifera elongation factor-1alpha
           F2 protein.
          Length = 461

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 217 IDLYIFGHV*INSKKFYKYLLNDCGGI 137
           I++ + GHV         +L+  CGGI
Sbjct: 8   INIVVIGHVDSGKSTTTGHLIYKCGGI 34


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,985
Number of Sequences: 438
Number of extensions: 4197
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27067071
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)