Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15m20f
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0080 + 6598427-6598663,6599246-6599391,6599567-6599669,660...    81   6e-16
08_02_0585 + 19014674-19014871,19014987-19015132,19016742-190168...    66   2e-11
09_03_0038 + 11790075-11790302,11790397-11790542,11790915-117910...    63   2e-10
09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008...    62   4e-10
03_06_0470 + 34164873-34165856,34166335-34166568,34166680-341670...    34   0.086
10_01_0077 + 998506-998708,999141-999209,999287-999544,999790-99...    29   2.4  

>02_02_0080 +
           6598427-6598663,6599246-6599391,6599567-6599669,
           6600407-6600593,6600699-6600792,6601290-6601443,
           6601751-6601855,6601937-6602053,6602248-6602361,
           6602891-6603073,6603207-6603486,6603565-6603686,
           6603763-6603860,6603941-6604118,6604439-6604553,
           6604656-6604723,6604825-6604902,6604986-6605060,
           6605156-6605338
          Length = 878

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 1/169 (0%)
 Frame = +3

Query: 150 LPGESFPTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISV-FTDR 326
           LPG + P  YD+ L  D  +  +F G V + +     T  +V+ A E+ +    V F   
Sbjct: 17  LPGFAAPRRYDLRLVPD-LDGCAFTGSVDVSVDVTAPTRFLVLNAAELEVSPGGVQFKPH 75

Query: 327 SSNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNG 506
            + + L  +      +   L I    ++LP     + I ++      M G Y S Y+ NG
Sbjct: 76  GAEQELHPAEVTNVPEDEILIIRFN-EVLPVGEGTLVIAFKGTLNDKMHGFYRSVYELNG 134

Query: 507 RTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPAAYTVVRHNTP 653
              N+  +Q +P  ARR FPC+DEP+ KAIF+ T+  P+  TV   N P
Sbjct: 135 EKKNMAVTQFEPADARRCFPCWDEPSFKAIFKITLEVPSE-TVALSNMP 182


>08_02_0585 +
           19014674-19014871,19014987-19015132,19016742-19016844,
           19017064-19017250,19017368-19017461,19017570-19017723,
           19018076-19018192,19018276-19018296,19019096-19019209,
           19019970-19020152,19021032-19021239,19021326-19021447,
           19021559-19021656,19021875-19022052,19022130-19022244,
           19022331-19022398,19022526-19022603,19023737-19023814,
           19023897-19024082
          Length = 815

 Score = 66.5 bits (155), Expect = 2e-11
 Identities = 47/158 (29%), Positives = 76/158 (48%)
 Frame = +3

Query: 150 LPGESFPTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRS 329
           LP  + P  YD+ L  D A   +F+G  ++ +     T  +V+ A E+ +       D S
Sbjct: 14  LPRCASPLSYDLRLRPDLA-ACAFSGSAAVAVAVSAPTRFLVLNAAELAV-------DGS 65

Query: 330 SNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNGR 509
           S+  L  S  +  ++   + I    Q LP    ++ +D+       M G Y S Y+  G 
Sbjct: 66  SD--LVPSEVVQFEEDEIVVIGFG-QDLPIGEGVLKMDFTGTLNDQMRGFYRSKYEYKGE 122

Query: 510 TVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPA 623
           + N+  +Q +   ARR FPC+DEPA KA F+ T+  P+
Sbjct: 123 SRNMAVTQFEAADARRCFPCWDEPAFKAKFKLTLEVPS 160


>09_03_0038 +
           11790075-11790302,11790397-11790542,11790915-11791017,
           11791148-11791334,11791466-11791559,11791702-11791855,
           11792189-11792305,11792695-11792808,11793629-11793811,
           11794209-11794494,11794592-11794713,11794746-11794802,
           11794803-11794900,11795036-11795213,11795355-11795455,
           11795530-11795629,11795751-11795828,11796785-11796862,
           11796956-11797138
          Length = 868

 Score = 62.9 bits (146), Expect = 2e-10
 Identities = 43/158 (27%), Positives = 72/158 (45%)
 Frame = +3

Query: 150 LPGESFPTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRS 329
           LP  + P  Y++ L  D  +   F G  S+ +     T  +V+ A ++ +   S+     
Sbjct: 20  LPRFAAPRRYELRLRPD-LDACVFTGDASVVVDVSAPTRFLVLNAADLAVDRASI----- 73

Query: 330 SNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNGR 509
             + L  +     +D   L +    +L P    ++ +D+       M G Y S Y+  G 
Sbjct: 74  RFQGLAPTEVSLFEDDEILVLEFDGEL-PLGEGVLAMDFNGTLNDQMRGFYRSKYEYKGE 132

Query: 510 TVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPA 623
           T N+  +Q +   ARR FPC+DEPA KA F+ T+  P+
Sbjct: 133 TKNMAVTQFEAVDARRCFPCWDEPAFKAKFKLTLEVPS 170


>09_03_0039 +
           11799277-11799486,11799565-11799710,11800758-11800860,
           11800996-11801182,11801299-11801392,11801530-11801683,
           11801963-11802067,11802151-11802267,11802688-11802801,
           11803171-11803260,11803875-11804057,11809196-11809550,
           11809574-11809643,11809993-11810167,11810251-11810351,
           11810390-11810516,11810639-11810716,11811926-11812270
          Length = 917

 Score = 62.1 bits (144), Expect = 4e-10
 Identities = 43/165 (26%), Positives = 76/165 (46%)
 Frame = +3

Query: 129 DLASQYVLPGESFPTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSI 308
           +   Q  LP  + P  Y++ L  D A  V F+G+ S+ +     T  +V+ A ++ +   
Sbjct: 7   EFRGQARLPRFAAPRRYELRLRPDLAACV-FSGEASVAVDVSAPTRFLVLNAADLAVDRA 65

Query: 309 SVFTDRSSNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVS 488
           S+       + L  +     ++   L +    +L P    ++ + +       M G Y S
Sbjct: 66  SI-----RFQGLAPAEVSVFEEDEILVLEFAGEL-PLGEGVLAMRFNGTLNDQMRGFYRS 119

Query: 489 TYQQNGRTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPA 623
            Y+  G T N+  +Q +   ARR FPC+DEP+ KA F+ T+  P+
Sbjct: 120 KYEYKGETKNMAVTQFESVDARRCFPCWDEPSFKAKFKLTLEVPS 164


>03_06_0470 +
           34164873-34165856,34166335-34166568,34166680-34167006,
           34168426-34168716
          Length = 611

 Score = 34.3 bits (75), Expect = 0.086
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +3

Query: 498 QNGRTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPAAYTVV 638
           Q   ++  V SQ Q   AR  FPC+D PA +  F   +  P   + V
Sbjct: 118 QTASSLPFVFSQCQSIHARSVFPCHDTPAARITFDLLLNVPTQLSAV 164


>10_01_0077 +
           998506-998708,999141-999209,999287-999544,999790-999868,
           999972-1000064,1000147-1000174,1000223-1000227
          Length = 244

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +3

Query: 441 DYESKYAPNMFGVYVSTYQQNGRTVNLVTSQLQPTFARRAFPCYDEP 581
           D E  YAP  F  +   YQQ G+         +  F R  +PC+ +P
Sbjct: 166 DKECVYAPYAFDAFKRYYQQGGQR----KKSRERIFVRNKWPCHKQP 208


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,663,752
Number of Sequences: 37544
Number of extensions: 408214
Number of successful extensions: 1060
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)