Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15m20f
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61949-2|AAB03152.1| 884|Caenorhabditis elegans Puromycin-sensi... 76 3e-14
U61949-1|AAY44009.1| 948|Caenorhabditis elegans Puromycin-sensi... 76 3e-14
Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical pr... 61 6e-10
AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical... 61 6e-10
Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical pr... 59 3e-09
Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical pr... 56 3e-08
Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical pr... 52 5e-07
U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical ... 50 2e-06
CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical... 45 4e-05
AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical... 45 4e-05
CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical... 45 5e-05
AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidas... 45 5e-05
AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidas... 45 5e-05
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 31 0.71
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 31 0.71
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 31 0.71
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 31 0.71
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 31 0.71
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 31 0.71
Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical pr... 31 0.71
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 31 0.71
AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class I... 31 0.71
AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class I... 31 0.71
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 31 0.71
AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class I... 31 0.71
AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical ... 31 0.94
AC024826-18|AAF60803.1| 412|Caenorhabditis elegans Cop-9 signal... 30 1.2
Z68270-11|CAJ90499.1| 394|Caenorhabditis elegans Hypothetical p... 28 6.7
Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical p... 28 6.7
AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear recep... 28 6.7
AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear recep... 28 6.7
>U61949-2|AAB03152.1| 884|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform a
protein.
Length = 884
Score = 75.8 bits (178), Expect = 3e-14
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Frame = +3
Query: 150 LPGESFPTFYDVSLFIDPA-NTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDR 326
LP + PT Y+V L P N SF+G +I + + AT+V+ V A + I+S+S+ T
Sbjct: 16 LPTFAEPTHYNVRL--SPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSLITQP 73
Query: 327 S-SNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQ-Q 500
++++L S+ D + L I T + P Q ++ + + M G Y S Y+ +
Sbjct: 74 GDASKSLETSYD---DKLNILTIKLPTTMQP-QKVQLDFKFVGELNDKMRGFYRSQYKDK 129
Query: 501 NGRTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTI 611
NG L ++Q + T+AR AFPC+DEP KA F T+
Sbjct: 130 NGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVTL 166
>U61949-1|AAY44009.1| 948|Caenorhabditis elegans
Puromycin-sensitive aminopeptidaseprotein 1, isoform b
protein.
Length = 948
Score = 75.8 bits (178), Expect = 3e-14
Identities = 53/157 (33%), Positives = 84/157 (53%), Gaps = 3/157 (1%)
Frame = +3
Query: 150 LPGESFPTFYDVSLFIDPA-NTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDR 326
LP + PT Y+V L P N SF+G +I + + AT+V+ V A + I+S+S+ T
Sbjct: 80 LPTFAEPTHYNVRL--SPCLNQFSFDGHATIDVTIKEATDVLKVHAQSLLIQSVSLITQP 137
Query: 327 S-SNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQ-Q 500
++++L S+ D + L I T + P Q ++ + + M G Y S Y+ +
Sbjct: 138 GDASKSLETSYD---DKLNILTIKLPTTMQP-QKVQLDFKFVGELNDKMRGFYRSQYKDK 193
Query: 501 NGRTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTI 611
NG L ++Q + T+AR AFPC+DEP KA F T+
Sbjct: 194 NGTEKFLASTQFESTYARYAFPCFDEPIYKATFDVTL 230
>Z81543-6|CAB04428.2| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 61.3 bits (142), Expect = 6e-10
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 150 LPGESFPTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRS 329
LP + P YD++L + N VSIRI+ + T ++++ A + ++S + +
Sbjct: 200 LPRTAEPIDYDLTLHPNLTNG-EVEASVSIRILIKNDTKLLILNAENLEMKSFDITKKGA 258
Query: 330 SNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQ-QNG 506
+ F + T L +L ++ I Y ++ ++ G+Y ST+ +G
Sbjct: 259 KVKADFVKCAVMTQWAWKLA----KRLHKGDHIVLTIYYSAQMKSDLQGLYFSTHLGTDG 314
Query: 507 RTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTI 611
+ +Q +PTFAR+ PC+DEP KA F+ I
Sbjct: 315 KKTKSAATQFEPTFARKMLPCFDEPNFKATFQVAI 349
>AL132876-39|CAL49440.1| 1082|Caenorhabditis elegans Hypothetical
protein F49B2.6 protein.
Length = 1082
Score = 61.3 bits (142), Expect = 6e-10
Identities = 41/155 (26%), Positives = 74/155 (47%), Gaps = 1/155 (0%)
Frame = +3
Query: 150 LPGESFPTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRS 329
LP + P YD++L + N VSIRI+ + T ++++ A + ++S + +
Sbjct: 200 LPRTAEPIDYDLTLHPNLTNG-EVEASVSIRILIKNDTKLLILNAENLEMKSFDITKKGA 258
Query: 330 SNENLFASFTLATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQ-QNG 506
+ F + T L +L ++ I Y ++ ++ G+Y ST+ +G
Sbjct: 259 KVKADFVKCAVMTQWAWKLA----KRLHKGDHIVLTIYYSAQMKSDLQGLYFSTHLGTDG 314
Query: 507 RTVNLVTSQLQPTFARRAFPCYDEPAIKAIFRTTI 611
+ +Q +PTFAR+ PC+DEP KA F+ I
Sbjct: 315 KKTKSAATQFEPTFARKMLPCFDEPNFKATFQVAI 349
>Z69794-3|CAA93680.1| 747|Caenorhabditis elegans Hypothetical
protein R03G8.6 protein.
Length = 747
Score = 58.8 bits (136), Expect = 3e-09
Identities = 49/207 (23%), Positives = 94/207 (45%), Gaps = 9/207 (4%)
Frame = +3
Query: 45 MYLLLITALLGSAYSFPTSTLNNVTRNTDLASQYVLPGESFPTFYDVSL--------FID 200
M LL++ +L F S L+ R D+AS Y LP P+ YD+ + +
Sbjct: 1 MRLLILVFILAIIKPF-ASELD--ARIADVAS-YRLPRHVSPSHYDIHIKTYLPGYGWKA 56
Query: 201 PANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTLATDDTH 380
N ++F G V+I + + T+ +V+ + + I S T +S +N+ S ++
Sbjct: 57 DENKITFEGNVNILLDIKETTDKLVLHSSSLNIISA---TFQSDEQNVSISHWNVQTESQ 113
Query: 381 FLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVS-TYQQNGRTVNLVTSQLQPTFARR 557
FL + + I+++ K + G++ + + +++G + +Q + FAR
Sbjct: 114 FLTFYLNNTVKVQSSAGIQINFQGKVRTDGLGLFATNSTREDGTVMTNFATQFETIFARN 173
Query: 558 AFPCYDEPAIKAIFRTTIYAPAAYTVV 638
PC+DEP KA + ++ P T +
Sbjct: 174 MIPCFDEPEFKATWNVSLEHPTGSTAL 200
>Z30317-5|CAA82971.4| 1890|Caenorhabditis elegans Hypothetical
protein T16G12.1 protein.
Length = 1890
Score = 55.6 bits (128), Expect = 3e-08
Identities = 40/157 (25%), Positives = 72/157 (45%), Gaps = 4/157 (2%)
Frame = +3
Query: 168 PTFYDVSLFIDPANTVSFNGKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRSSNENLF 347
P F + P +F+G+ SI++ +A++ ++ A I+S V + +
Sbjct: 96 PYFPSPGVQYAPEKNFTFDGRASIQVEALVASDRFILNAYNFKIQSYKVV---DIDGTVV 152
Query: 348 ASFTLATDDT--HFLRISTRTQLLPDQPYIVNIDYESKYAPNMFG-VYVSTYQQ-NGRTV 515
+++ DDT I+ ++ Q Y + Y P G VY ++Y G T
Sbjct: 153 PINSISQDDTTQQLSLITNANGVVAGQIYNIEFVYTGIINPYTDGGVYYTSYNDPQGNTH 212
Query: 516 NLVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPAA 626
++ + ++P AR+ FP DEP+ KA F T+ PA+
Sbjct: 213 YMIATHMEPFSARKVFPSLDEPSYKAKFTITVQYPAS 249
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 549 ARRAFPCYDEPAIKAIFRTTIYAP 620
AR PC+DEP+ K F +++ P
Sbjct: 1148 ARSLLPCWDEPSYKGQFEVSVFHP 1171
>Z77669-5|CAK12563.1| 976|Caenorhabditis elegans Hypothetical
protein T07F10.1b protein.
Length = 976
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Frame = +3
Query: 207 NTVSFNGKVSIRI-----IPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTL--- 362
N ++F G+V I + I +++ N + E I+ S+ + S +FTL
Sbjct: 101 NNLTFEGQVLIELNITKSIKKVSLNSKDLNYTEEFIKKSSILVNGKS-----IAFTLDDK 155
Query: 363 -ATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQN-GRTVNLVTSQL 536
+T + F + + P + + + + +M G+Y +TY + G + +Q+
Sbjct: 156 QSTHEKIFFNLDETVE--PTTSATLKVAFGAPLRTDMSGLYQTTYTNSKGESKMAAVTQM 213
Query: 537 QPTFARRAFPCYDEPAIKAIFRTTIYAP 620
+P +ARR PC+DEPA KA + T+ P
Sbjct: 214 EPVYARRMVPCFDEPAYKATWTVTVIHP 241
>Z77669-4|CAB01242.1| 988|Caenorhabditis elegans Hypothetical
protein T07F10.1a protein.
Length = 988
Score = 52.0 bits (119), Expect = 4e-07
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Frame = +3
Query: 207 NTVSFNGKVSIRI-----IPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTL--- 362
N ++F G+V I + I +++ N + E I+ S+ + S +FTL
Sbjct: 113 NNLTFEGQVLIELNITKSIKKVSLNSKDLNYTEEFIKKSSILVNGKS-----IAFTLDDK 167
Query: 363 -ATDDTHFLRISTRTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQN-GRTVNLVTSQL 536
+T + F + + P + + + + +M G+Y +TY + G + +Q+
Sbjct: 168 QSTHEKIFFNLDETVE--PTTSATLKVAFGAPLRTDMSGLYQTTYTNSKGESKMAAVTQM 225
Query: 537 QPTFARRAFPCYDEPAIKAIFRTTIYAP 620
+P +ARR PC+DEPA KA + T+ P
Sbjct: 226 EPVYARRMVPCFDEPAYKATWTVTVIHP 253
>Z69794-2|CAA93681.1| 786|Caenorhabditis elegans Hypothetical
protein R03G8.4 protein.
Length = 786
Score = 51.6 bits (118), Expect = 5e-07
Identities = 54/193 (27%), Positives = 84/193 (43%), Gaps = 10/193 (5%)
Frame = +3
Query: 90 FPTSTLNNVTRNTDLASQYVLPGESFPTFY--DVSLFID------PANTVSFNGKVSIRI 245
F T+ L VT+ TD + Y LP FPT Y ++ F+ + +F G V I+I
Sbjct: 13 FKTTDLQVVTQETD-DTNYRLPRNVFPTEYRLHITTFLPGYKWEADEKSFTFIGDVKIQI 71
Query: 246 IPRIATNVIVVQAMEMTIRSISVFTDR--SSNENLFASFTLATDDTHFLRISTRTQLLPD 419
+ T+ IV+ + I ++ + ++ +NL F LA + + L
Sbjct: 72 EVKEETDTIVLHTDSLNINNVLLHNACVCANLKNLIQYFRLAITKFENRQQTNSKYSLYG 131
Query: 420 QPYIVNIDYESKYAPNMFGVYVSTYQQNGRTVNLVTSQLQPTFARRAFPCYDEPAIKAIF 599
+ + D E Y G+ +T N VT Q +PT AR PC+DEP KAI+
Sbjct: 132 KIGKIREDGEGYYRTISPGLNETTMY------NAVT-QFEPTAARFMVPCFDEPEFKAIW 184
Query: 600 RTTIYAPAAYTVV 638
T+ P T +
Sbjct: 185 HVTVVHPTGSTAL 197
>U61944-6|ABP49529.1| 529|Caenorhabditis elegans Hypothetical
protein T12E12.6 protein.
Length = 529
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/44 (54%), Positives = 29/44 (65%)
Frame = +3
Query: 519 LVTSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPAAYTVVRHNT 650
L T+ LQP ARR FPC D PA+KA+FR +I P TV + NT
Sbjct: 21 LYTTHLQPNHARRLFPCIDHPAVKALFRLSIVHPTD-TVAQSNT 63
>AL032618-1|CAB63366.1| 1045|Caenorhabditis elegans Hypothetical
protein Y42A5A.1 protein.
Length = 1045
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 375 THFLRISTRTQLLPDQPYIVNIDYESKYAPNM-FGVYVSTYQQNGRTVNLVTSQLQPTFA 551
+ L ++ T ++ Y +++ ++S N+ +G++ + Y T +V +QLQ + A
Sbjct: 234 SQILDLNLETDMIHGMNYTLDVAFKSAINLNLAYGLFAAPYTFENETRYVVATQLQISEA 293
Query: 552 RRAFPCYDEPAIKAIFRTTIYAPAAYTVV 638
R FPC D P +KA F T I P T +
Sbjct: 294 RTVFPCIDVPDMKAQFDTVIIHPTGTTSI 322
>CU457741-13|CAM36354.1| 608|Caenorhabditis elegans Hypothetical
protein C42C1.11c protein.
Length = 608
Score = 45.2 bits (102), Expect = 4e-05
Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Frame = +3
Query: 225 GKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTLATDDT--HFLRIST 398
G VSI + + T IV+ +++++S+++ + E A FTL + L I+T
Sbjct: 38 GDVSITLDVKQDTERIVLDTRDLSVQSVAL---NLNGEPKKAGFTLEDNQALGQKLVITT 94
Query: 399 RTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNGRTVNLVTSQLQPTFARRAFPCYDE 578
+ D+P ++ I YES + N + T +Q + SQ Q AR PC D
Sbjct: 95 ESLKSGDRP-VLEIKYES--SNNAAALQFLTAEQTTDRAPYLFSQCQAINARSIVPCMDT 151
Query: 579 PAIKAIFRTTIYAPAAYT 632
P++K+ + + P T
Sbjct: 152 PSVKSTYEAEVCVPIGLT 169
>AC025724-10|AAG23372.2| 1073|Caenorhabditis elegans Hypothetical
protein Y67D8C.9 protein.
Length = 1073
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/43 (41%), Positives = 27/43 (62%)
Frame = +3
Query: 525 TSQLQPTFARRAFPCYDEPAIKAIFRTTIYAPAAYTVVRHNTP 653
T++ +PT AR FPC+DEP +KA F ++ YTV+ + P
Sbjct: 239 TTKFEPTLARAFFPCWDEPGVKATFNISVRHNKKYTVLSNMPP 281
>CU457741-11|CAM36352.1| 609|Caenorhabditis elegans Hypothetical
protein C42C1.11a protein.
Length = 609
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Frame = +3
Query: 225 GKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTLATDDT--HFLRIST 398
G VSI + + T IV+ +++++S+++ + E A FTL + L I+T
Sbjct: 38 GDVSITLDVKQDTERIVLDTRDLSVQSVAL---NLNGEPKKAGFTLEDNQALGQKLVITT 94
Query: 399 RTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNGRTVNLVTSQLQPTFARRAFPCYDE 578
+ D+P ++ I YES +++ Q R + SQ Q AR PC D
Sbjct: 95 ESLKSGDRP-VLEIKYESSNNAAALQ-FLTAEQTTDRVAPYLFSQCQAINARSIVPCMDT 152
Query: 579 PAIKAIFRTTIYAPAAYT 632
P++K+ + + P T
Sbjct: 153 PSVKSTYEAEVCVPIGLT 170
>AF068201-1|AAC70927.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Frame = +3
Query: 225 GKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTLATDDT--HFLRIST 398
G VSI + + T IV+ +++++S+++ + E A FTL + L I+T
Sbjct: 38 GDVSITLDVKQDTERIVLDTRDLSVQSVAL---NLNGEPKKAGFTLEDNQALGQKLVITT 94
Query: 399 RTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNGRTVNLVTSQLQPTFARRAFPCYDE 578
+ D+P ++ I YES +++ Q R + SQ Q AR PC D
Sbjct: 95 ESLKSGDRP-VLEIKYESSNNAAALQ-FLTAEQTTDRVAPYLFSQCQAINARSIVPCMDT 152
Query: 579 PAIKAIFRTTIYAPAAYT 632
P++K+ + + P T
Sbjct: 153 PSVKSTYEAEVCVPIGLT 170
>AF068200-1|AAC72891.1| 609|Caenorhabditis elegans aminopeptidase-1
protein.
Length = 609
Score = 44.8 bits (101), Expect = 5e-05
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Frame = +3
Query: 225 GKVSIRIIPRIATNVIVVQAMEMTIRSISVFTDRSSNENLFASFTLATDDT--HFLRIST 398
G VSI + + T IV+ +++++S+++ + E A FTL + L I+T
Sbjct: 38 GDVSITLDVKQDTERIVLDTRDLSVQSVAL---NLNGEPKKAGFTLEDNQALGQKLVITT 94
Query: 399 RTQLLPDQPYIVNIDYESKYAPNMFGVYVSTYQQNGRTVNLVTSQLQPTFARRAFPCYDE 578
+ D+P ++ I YES +++ Q R + SQ Q AR PC D
Sbjct: 95 ESLKSGDRP-VLEIKYESSNNAAALQ-FLTAEQTTDRVAPYLFSQCQAINARSIVPCMDT 152
Query: 579 PAIKAIFRTTIYAPAAYT 632
P++K+ + + P T
Sbjct: 153 PSVKSTYEAEVCVPIGLT 170
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1424 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1479
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1480 CSSVSNVSPSNSQ 1492
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1492 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1547
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1548 CSSVSNVSPSNSQ 1560
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1492 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1547
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1548 CSSVSNVSPSNSQ 1560
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1492 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1547
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1548 CSSVSNVSPSNSQ 1560
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1492 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1547
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1548 CSSVSNVSPSNSQ 1560
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1492 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1547
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1548 CSSVSNVSPSNSQ 1560
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 1050 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 1105
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 1106 CSSVSNVSPSNSQ 1118
>Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical
protein T05A10.1h protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 140 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 195
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 196 CSSVSNVSPSNSQ 208
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 491 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 546
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 547 CSSVSNVSPSNSQ 559
>AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 537
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 140 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 195
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 196 CSSVSNVSPSNSQ 208
>AY390549-1|AAQ94961.1| 411|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 411
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 14 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 69
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 70 CSSVSNVSPSNSQ 82
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 395 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 450
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 451 CSSVSNVSPSNSQ 463
>AY390542-1|AAQ94954.1| 468|Caenorhabditis elegans SMA-9 class IIa
protein.
Length = 468
Score = 31.1 bits (67), Expect = 0.71
Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Frame = +1
Query: 52 CYSSPPFWAQLTRSQRAL*TTSQGIRIWPPSMSYPENHSPRSTMSVYSLILPIPS--VST 225
C S+PP Q RA+ T G P +S + HSP ST S ++IL IP+ S
Sbjct: 72 CMSAPPVAMQRDFDDRAM-TPVSGAN--SPYLSQ-QVHSPMSTSSQSNIILDIPNNQKSN 127
Query: 226 GRSASELSPGLQQ 264
S S +SP Q
Sbjct: 128 CSSVSNVSPSNSQ 140
>AF036701-2|AAB88369.2| 625|Caenorhabditis elegans Hypothetical
protein ZC416.6 protein.
Length = 625
Score = 30.7 bits (66), Expect = 0.94
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 528 SQLQPTFARRAFPCYDEPAIKAIFRTTIYAPAAYT 632
SQ Q AR PC D P++K+ + + P T
Sbjct: 140 SQCQAIHARSIVPCMDTPSVKSTYEAEVTVPTGMT 174
>AC024826-18|AAF60803.1| 412|Caenorhabditis elegans Cop-9
signalosome subunit protein 4 protein.
Length = 412
Score = 30.3 bits (65), Expect = 1.2
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Frame = +3
Query: 225 GKVSIRIIPRIATNVIVVQAMEMTI--RSISVFTDRSSNENLFASFTLATDDTHFLRIST 398
G+V I +I VI ++ M + + +S+ T+R N++L + A + I T
Sbjct: 42 GRVDTAEIIKIIDTVIALETGSMVVSRQFVSLITERLDNQHLESECVKAISEGILAIIKT 101
Query: 399 RTQLLPDQPYIVNIDYESKY 458
RT DQ I+ + S Y
Sbjct: 102 RTISYEDQVCILRLMLASLY 121
>Z68270-11|CAJ90499.1| 394|Caenorhabditis elegans Hypothetical
protein ZC410.1b protein.
Length = 394
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 8 SFEGDSVNTYIGYVFATHHRPFGLSLLVPNEHFEQRHKEYGSGLPVCPTRRII 166
SF+G ++Y ATH P G+ + N Q + +GL C RRI+
Sbjct: 95 SFDGGYCSSYPSSSAATHPSPPGMLYSIENNSILQYYHSMETGL--CSKRRIM 145
>Z68270-10|CAA92572.2| 459|Caenorhabditis elegans Hypothetical
protein ZC410.1a protein.
Length = 459
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 8 SFEGDSVNTYIGYVFATHHRPFGLSLLVPNEHFEQRHKEYGSGLPVCPTRRII 166
SF+G ++Y ATH P G+ + N Q + +GL C RRI+
Sbjct: 160 SFDGGYCSSYPSSSAATHPSPPGMLYSIENNSILQYYHSMETGL--CSKRRIM 210
>AY305838-1|AAR11983.1| 459|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 459
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 8 SFEGDSVNTYIGYVFATHHRPFGLSLLVPNEHFEQRHKEYGSGLPVCPTRRII 166
SF+G ++Y ATH P G+ + N Q + +GL C RRI+
Sbjct: 160 SFDGGYCSSYPSSSAATHPSPPGMLYSIENNSILQYYHSMETGL--CSKRRIM 210
>AF083227-1|AAD03685.1| 290|Caenorhabditis elegans nuclear receptor
NHR-11 protein.
Length = 290
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 8 SFEGDSVNTYIGYVFATHHRPFGLSLLVPNEHFEQRHKEYGSGLPVCPTRRII 166
SF+G ++Y ATH P G+ + N Q + +GL C RRI+
Sbjct: 112 SFDGGYCSSYPSSSAATHPSPPGMLYSIENNSILQYYHSMETGL--CSKRRIM 162
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,208,444
Number of Sequences: 27780
Number of extensions: 364221
Number of successful extensions: 1092
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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