Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15m20f
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 2.6
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 2.6
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 2.6
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 2.6
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 23 3.4
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 22 4.5
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 6.0
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 6.0
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 7.9
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 21 7.9
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 359 SETSKQVFVAAPVSKNTNASNGHLHGLDNDNICCNPGDNSD 237
S+ KQV + V+ N G L L ++ CN NSD
Sbjct: 162 SQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCN--TNSD 200
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 359 SETSKQVFVAAPVSKNTNASNGHLHGLDNDNICCNPGDNSD 237
S+ KQV + V+ N G L L ++ CN NSD
Sbjct: 162 SQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCN--TNSD 200
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = -2
Query: 410 ELCSGTDSQKMRIISC*SETSKQVFVAAPVSKNTNASNGHLHGLDNDNICCNPGDNSDAD 231
E C+ + + + +C ++ A + NTNASN + + +N+N DN + +
Sbjct: 204 EECTEATAGAVVLETCQRNSNNSTITAG--NANTNASNNNNNNNNNNNNNNGANDNGNGN 261
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 359 SETSKQVFVAAPVSKNTNASNGHLHGLDNDNICCNPGDNSD 237
S+ KQV + V+ N G L L ++ CN NSD
Sbjct: 162 SQLLKQVEIPHDVAVNATTGKGRLSSLAVQSLDCN--TNSD 200
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/41 (24%), Positives = 22/41 (53%)
Frame = +1
Query: 472 SEYMYLHTNKMDEL*IW*LLNFNQRLPAVHSLATMSRLSKL 594
S+Y + H ++ L + ++ F++RLP L +++ L
Sbjct: 371 SDYKFRHITEITILTVQLIVEFSKRLPGFDELMREDQIALL 411
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 420 QPYIVNIDYESKY 458
+ YIVN +Y SKY
Sbjct: 198 ETYIVNTNYSSKY 210
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 605 SSENSFDSRLIVARECTAGKRWLKLRSYQIYSSSILLVC 489
++ N F S L V TA W + IY+S + VC
Sbjct: 345 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVC 383
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 605 SSENSFDSRLIVARECTAGKRWLKLRSYQIYSSSILLVC 489
++ N F S L V TA W + IY+S + VC
Sbjct: 314 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVC 352
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 605 SSENSFDSRLIVARECTAGKRWLKLRSYQIYSSSILLVC 489
++ N F S L V TA W + IY+S + VC
Sbjct: 365 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVC 403
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.8 bits (44), Expect = 6.0
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = -2
Query: 605 SSENSFDSRLIVARECTAGKRWLKLRSYQIYSSSILLVC 489
++ N F S L V TA W + IY+S + VC
Sbjct: 314 TTSNGFRSTLPVVSNLTAMNVWDGVCMCFIYASLLEFVC 352
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 7.9
Identities = 9/34 (26%), Positives = 14/34 (41%)
Frame = +3
Query: 552 RRAFPCYDEPAIKAIFRTTIYAPAAYTVVRHNTP 653
++ +PC DEP F T+ + V P
Sbjct: 212 KKYYPCCDEPYPDIFFNITLRRKTLFYTVNLIVP 245
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 21.4 bits (43), Expect = 7.9
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +3
Query: 417 DQPYIVNIDYESKYAPNMFGVYVSTYQQNGRTVNL 521
D I+ D Y N+ STYQ NG V L
Sbjct: 131 DDVKILRNDRIDSYKSNLKCDKCSTYQSNGEEVCL 165
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,710
Number of Sequences: 438
Number of extensions: 4609
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -