Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15m11f
         (677 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         25   0.66 
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    25   0.66 
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    25   0.66 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   8.2  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.2  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 554 VVCFGRAC*GRSDRDWNSEAQNGYIPFIHDPEF 456
           +VC G  C G +      E+ N  +P +H+ +F
Sbjct: 7   LVCLGIVCQGTTGNILRGESLNKSLPILHEWKF 39


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 554 VVCFGRAC*GRSDRDWNSEAQNGYIPFIHDPEF 456
           +VC G  C G +      E+ N  +P +H+ +F
Sbjct: 7   LVCLGIVCQGTTGNILRGESLNKSLPILHEWKF 39


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = -1

Query: 554 VVCFGRAC*GRSDRDWNSEAQNGYIPFIHDPEF 456
           +VC G  C G +      E+ N  +P +H+ +F
Sbjct: 7   LVCLGIVCQGTTGNILRGESLNKSLPILHEWKF 39


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 126 QCIRNEGDLPIN 161
           QCI   GDLP+N
Sbjct: 604 QCIVPTGDLPLN 615


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +3

Query: 354 LTNTYCPLLAGEVATYTLRMFIEPFFPQGTAVTVEFRVVDERNVPV 491
           +   Y P L   VA+ T      PF P GT +    R VDE N  +
Sbjct: 267 IPEAYFPKLDSLVASRTW-----PFRPSGTVLKDINRQVDELNFDI 307


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 197,958
Number of Sequences: 438
Number of extensions: 4458
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20586735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)