Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15l06f
(672 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 33 0.27
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 33 0.27
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 31 1.1
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 31 1.4
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 31 1.4
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 31 1.4
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 31 1.4
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 30 2.5
U59147-1|AAB02271.1| 614|Drosophila melanogaster vacuolar ATPas... 29 7.6
U59146-1|AAB02270.1| 614|Drosophila melanogaster vacuolar ATPas... 29 7.6
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 29 7.6
AY084150-1|AAL89888.1| 614|Drosophila melanogaster RE30552p pro... 29 7.6
AE014134-2268|AAF53232.1| 614|Drosophila melanogaster CG3762-PC... 29 7.6
AE014134-2267|AAF53233.1| 614|Drosophila melanogaster CG3762-PB... 29 7.6
AE014134-2266|AAF53231.1| 614|Drosophila melanogaster CG3762-PA... 29 7.6
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 33.5 bits (73), Expect = 0.27
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 2/130 (1%)
Frame = +1
Query: 247 DKIITSHQEVASAFERYFADIPASTTKSLISSPTVAESLLQ-DHVDECSVNF-KFTNIAI 420
D+I S +E A+ F + + T S + T+ + + + E N + +
Sbjct: 405 DEIYASGKEKANILADVF-QLKHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTY 463
Query: 421 KDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYSKII 600
++ K ++ +K+ + G ++ I N C+ G FP K +KI+
Sbjct: 464 PEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIV 523
Query: 601 PLFKSGSTFD 630
P+ K G D
Sbjct: 524 PILKPGKPPD 533
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 33.5 bits (73), Expect = 0.27
Identities = 27/130 (20%), Positives = 52/130 (40%), Gaps = 2/130 (1%)
Frame = +1
Query: 247 DKIITSHQEVASAFERYFADIPASTTKSLISSPTVAESLLQ-DHVDECSVNF-KFTNIAI 420
D+I S +E A+ F + + T S + T+ + + + E N + +
Sbjct: 353 DEIYASGKEKANILADVF-QLKHNLTHSYSNQNTIDQVKISLQSIAETPNNIAEICRVTY 411
Query: 421 KDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYSKII 600
++ K ++ +K+ + G ++ I N C+ G FP K +KI+
Sbjct: 412 PEVFSIVKALHTRKSPGIDGIPNISLKNLPTSAINHIVNIANHCLQAGYFPRDWKIAKIV 471
Query: 601 PLFKSGSTFD 630
P+ K G D
Sbjct: 472 PILKPGKPPD 481
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 31.5 bits (68), Expect = 1.1
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +1
Query: 526 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPLTLDHFSTT 660
+LA IFN + G FP K + II + K+G T P +D + T
Sbjct: 476 FLALIFNSVLDVGYFPKAWKSASIIMIHKTGKT--PTDVDSYRPT 518
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 31.1 bits (67), Expect = 1.4
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Frame = +1
Query: 100 KKVCTLAKSLHLGKLIKNA----PDKIKMTWNIINR-ETGNVRNSNAESILKINDKIITS 264
KK + + + K I+ PD+++ W +++ + N N + K K +
Sbjct: 249 KKAVKILREKRINKQIEGIDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKWTKT 308
Query: 265 HQEVASAFERYFA-------DIPASTTKSLISS-PTVAESLLQDHVDECSVNFKFTN--I 414
+E AF + ++P ++ S T+ ES+L + D VN N I
Sbjct: 309 IKETTEAFVSHLEGRFKPNNNVPDYHINTVNSGLRTIKESMLTERYD---VNKNPCNQPI 365
Query: 415 AIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYSK 594
+K++ D K + K YL I+N + G +PD K+++
Sbjct: 366 TLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQ 425
Query: 595 IIPLFKSG-STFDP 633
+ + K G S DP
Sbjct: 426 VKMILKPGKSVNDP 439
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.4
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Frame = +1
Query: 100 KKVCTLAKSLHLGKLIKNA----PDKIKMTWNIINR-ETGNVRNSNAESILKINDKIITS 264
KK + + + K I+ PD+++ W +++ + N N + K K +
Sbjct: 365 KKAVKILREKRINKQIEGIDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKWTKT 424
Query: 265 HQEVASAFERYFA-------DIPASTTKSLISS-PTVAESLLQDHVDECSVNFKFTN--I 414
+E AF + ++P ++ S T+ ES+L + D VN N I
Sbjct: 425 IKETTEAFVSHLEGRFKPNNNVPDYHINTVNSGLRTIKESMLTERYD---VNKNPCNQPI 481
Query: 415 AIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYSK 594
+K++ D K + K YL I+N + G +PD K+++
Sbjct: 482 TLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQ 541
Query: 595 IIPLFKSG-STFDP 633
+ + K G S DP
Sbjct: 542 VKMILKPGKSVNDP 555
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 31.1 bits (67), Expect = 1.4
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Frame = +1
Query: 100 KKVCTLAKSLHLGKLIKNA----PDKIKMTWNIINR-ETGNVRNSNAESILKINDKIITS 264
KK + + + K I+ PD+++ W +++ + N N + K K +
Sbjct: 327 KKAVKILREKRINKQIEGIDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKWTKT 386
Query: 265 HQEVASAFERYFA-------DIPASTTKSLISS-PTVAESLLQDHVDECSVNFKFTN--I 414
+E AF + ++P ++ S T+ ES+L + D VN N I
Sbjct: 387 IKETTEAFVSHLEGRFKPNNNVPDYHINTVNSGLRTIKESMLTERYD---VNKNPCNQPI 443
Query: 415 AIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYSK 594
+K++ D K + K YL I+N + G +PD K+++
Sbjct: 444 TLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQ 503
Query: 595 IIPLFKSG-STFDP 633
+ + K G S DP
Sbjct: 504 VKMILKPGKSVNDP 517
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 31.1 bits (67), Expect = 1.4
Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 16/194 (8%)
Frame = +1
Query: 100 KKVCTLAKSLHLGKLIKNA----PDKIKMTWNIINR-ETGNVRNSNAESILKINDKIITS 264
KK + + + K I+ PD+++ W +++ + N N + K K +
Sbjct: 365 KKAVKILREKRINKQIEGIDTKNPDRMRKMWRLLDEGKKTNQPNFPLKLETKRGPKWTKT 424
Query: 265 HQEVASAFERYFA-------DIPASTTKSLISS-PTVAESLLQDHVDECSVNFKFTN--I 414
+E AF + ++P ++ S T+ ES+L + D VN N I
Sbjct: 425 IKETTEAFVSHLEGRFKPNNNVPDYHINTVNSGLRTIKESMLTERYD---VNKNPCNQPI 481
Query: 415 AIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXXAPYLATIFNDCIYNGVFPDLMKYSK 594
+K++ D K + K YL I+N + G +PD K+++
Sbjct: 482 TLKELNDEIKNLKNSKAPGKDLITNQLIKTLPTKATLYLILIYNSILRIGYYPDAWKHAQ 541
Query: 595 IIPLFKSG-STFDP 633
+ + K G S DP
Sbjct: 542 VKMILKPGKSVNDP 555
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 30.3 bits (65), Expect = 2.5
Identities = 26/99 (26%), Positives = 41/99 (41%), Gaps = 3/99 (3%)
Frame = +1
Query: 346 TVAESLLQDHVDECSVNFKFTN--IAIKDIIDNFKTINIKKTGDLWGXXXXXXXXXXXXX 519
T+ ES+L + D VN N I +K++ D K + K
Sbjct: 460 TIKESMLTERYD---VNKNPCNQPITLKELNDEIKNLKNSKAPGKDLITNQLIKALPTKA 516
Query: 520 APYLATIFNDCIYNGVFPDLMKYSKIIPLFKSG-STFDP 633
YL I+N + G +PD K++++ + K G S DP
Sbjct: 517 TLYLILIYNSILRIGYYPDAWKHAQVKMILKPGKSVNDP 555
>U59147-1|AAB02271.1| 614|Drosophila melanogaster vacuolar ATPase
subunit A protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 154 APDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFADI 309
A + K+TWN+I GN+ S +K D + ++ + FE+ D+
Sbjct: 556 AQSENKITWNVIREAMGNIMYQ--LSSMKFKDPVKDGEAKIKADFEQLHEDL 605
>U59146-1|AAB02270.1| 614|Drosophila melanogaster vacuolar ATPase
subunit A protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 154 APDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFADI 309
A + K+TWN+I GN+ S +K D + ++ + FE+ D+
Sbjct: 556 AQSENKITWNVIREAMGNIMYQ--LSSMKFKDPVKDGEAKIKADFEQLHEDL 605
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 28.7 bits (61), Expect = 7.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +1
Query: 526 YLATIFNDCIYNGVFPDLMKYSKIIPLFKSGSTFDPLTLDHF 651
+L IFN + G FP K + II + K+G T P +D +
Sbjct: 278 FLVLIFNSVLDVGYFPKAWKSASIIMIHKTGKT--PTDVDSY 317
>AY084150-1|AAL89888.1| 614|Drosophila melanogaster RE30552p
protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 154 APDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFADI 309
A + K+TWN+I GN+ S +K D + ++ + FE+ D+
Sbjct: 556 AQSENKITWNVIREAMGNIMYQ--LSSMKFKDPVKDGEAKIKADFEQLHEDL 605
>AE014134-2268|AAF53232.1| 614|Drosophila melanogaster CG3762-PC,
isoform C protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 154 APDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFADI 309
A + K+TWN+I GN+ S +K D + ++ + FE+ D+
Sbjct: 556 AQSENKITWNVIREAMGNIMYQ--LSSMKFKDPVKDGEAKIKADFEQLHEDL 605
>AE014134-2267|AAF53233.1| 614|Drosophila melanogaster CG3762-PB,
isoform B protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 154 APDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFADI 309
A + K+TWN+I GN+ S +K D + ++ + FE+ D+
Sbjct: 556 AQSENKITWNVIREAMGNIMYQ--LSSMKFKDPVKDGEAKIKADFEQLHEDL 605
>AE014134-2266|AAF53231.1| 614|Drosophila melanogaster CG3762-PA,
isoform A protein.
Length = 614
Score = 28.7 bits (61), Expect = 7.6
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +1
Query: 154 APDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFADI 309
A + K+TWN+I GN+ S +K D + ++ + FE+ D+
Sbjct: 556 AQSENKITWNVIREAMGNIMYQ--LSSMKFKDPVKDGEAKIKADFEQLHEDL 605
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,205,528
Number of Sequences: 53049
Number of extensions: 491661
Number of successful extensions: 1385
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1385
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2910007350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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