Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15l06f
(672 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon gu... 30 1.3
U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon gu... 30 1.3
AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein. 30 1.3
Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical pr... 29 2.3
AL132943-12|CAB81978.3| 514|Caenorhabditis elegans Hypothetical... 29 3.0
AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein. 29 4.0
AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein. 29 4.0
AF154122-1|AAF74523.1| 669|Caenorhabditis elegans N-acetylgluco... 29 4.0
AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation... 29 4.0
Z81143-7|CAB03517.2| 383|Caenorhabditis elegans Hypothetical pr... 28 5.3
Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 28 5.3
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 6.9
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 6.9
AC098856-4|AAL27248.2| 261|Caenorhabditis elegans Hypothetical ... 28 6.9
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 6.9
Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical pr... 27 9.2
L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclas... 27 9.2
AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical ... 27 9.2
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ... 27 9.2
AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical ... 27 9.2
>U11279-2|AAW88400.1| 714|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform b protein.
Length = 714
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 112 TLAKSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFE 291
+L L LGKL+ ++K+ + + + V+NS + ++ I+ H+E+
Sbjct: 509 SLTSELDLGKLLNKLVFQVKLMIDALKDMSDAVKNSTSSQTYSLSPAILEHHRELLMC-- 566
Query: 292 RYFADIPASTTKSLISSPTVAESL 363
+D AS+ S +S + +S+
Sbjct: 567 --ASDDAASSVNSSLSRLNIDDSI 588
>U11279-1|AAW88399.1| 2886|Caenorhabditis elegans Sensory axon
guidance protein 2,isoform a protein.
Length = 2886
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 112 TLAKSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFE 291
+L L LGKL+ ++K+ + + + V+NS + ++ I+ H+E+
Sbjct: 2681 SLTSELDLGKLLNKLVFQVKLMIDALKDMSDAVKNSTSSQTYSLSPAILEHHRELLMC-- 2738
Query: 292 RYFADIPASTTKSLISSPTVAESL 363
+D AS+ S +S + +S+
Sbjct: 2739 --ASDDAASSVNSSLSRLNIDDSI 2760
>AY763581-1|AAV41897.1| 2914|Caenorhabditis elegans SAX-2 protein.
Length = 2914
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/84 (22%), Positives = 40/84 (47%)
Frame = +1
Query: 112 TLAKSLHLGKLIKNAPDKIKMTWNIINRETGNVRNSNAESILKINDKIITSHQEVASAFE 291
+L L LGKL+ ++K+ + + + V+NS + ++ I+ H+E+
Sbjct: 2709 SLTSELDLGKLLNKLVFQVKLMIDALKDMSDAVKNSTSSQTYSLSPAILEHHRELLMC-- 2766
Query: 292 RYFADIPASTTKSLISSPTVAESL 363
+D AS+ S +S + +S+
Sbjct: 2767 --ASDDAASSVNSSLSRLNIDDSI 2788
>Z78059-3|CAB01486.3| 345|Caenorhabditis elegans Hypothetical
protein C34B4.2a protein.
Length = 345
Score = 29.5 bits (63), Expect = 2.3
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 226 ESILKINDKIITSHQEVASAFERYFADIPASTTKSLISSPTVAES 360
+ I+K ND++ ++ Q +S+ F D S+ S +SSPT A S
Sbjct: 29 DQIIKENDRLDSAAQSPSSSLFSDFDDACTSSFASSLSSPTFATS 73
>AL132943-12|CAB81978.3| 514|Caenorhabditis elegans Hypothetical
protein Y116F11B.9a protein.
Length = 514
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 7 SRQRL-YDLYHEKSYNHNKSFHEYVCKYSKLFKKVCTLAKSLHLGKLIKNAPDKIKMTW 180
S++R+ Y +YH+KSYN S SK+ K + + G+ I P + TW
Sbjct: 295 SQKRISYIIYHQKSYNLKVSKRSSEFSISKMLKNLKFRDGNFGSGQKIVANPRYLNYTW 353
>AY037802-1|AAK94767.1| 669|Caenorhabditis elegans GLY-2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 570 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 391
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 390 TAF 382
+F
Sbjct: 299 DSF 301
>AY037800-1|AAK94765.1| 661|Caenorhabditis elegans GLY-2 protein.
Length = 661
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 570 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 391
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 233 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 290
Query: 390 TAF 382
+F
Sbjct: 291 DSF 293
>AF154122-1|AAF74523.1| 669|Caenorhabditis elegans
N-acetylglucosaminyltransferase V protein.
Length = 669
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 570 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 391
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 390 TAF 382
+F
Sbjct: 299 DSF 301
>AC006625-9|AAK68273.1| 669|Caenorhabditis elegans Glycosylation
related protein 2 protein.
Length = 669
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/63 (33%), Positives = 32/63 (50%)
Frame = -1
Query: 570 KHTIINTVIKYCSKVRCDYINNGFYNLN*YSP*ITSFFNINGLEIINYVLYSNICELKVN 391
K+T+ N V KY S+ C Y+NN L+ I FNI ++L SN C +++
Sbjct: 241 KNTLRNIVWKYMSRGPCQYVNNFRQQLDIIFTDIMG-FNILRQHHRQFLL-SNRCRIRLL 298
Query: 390 TAF 382
+F
Sbjct: 299 DSF 301
>Z81143-7|CAB03517.2| 383|Caenorhabditis elegans Hypothetical
protein ZK265.5 protein.
Length = 383
Score = 28.3 bits (60), Expect = 5.3
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +2
Query: 20 YMTFIMKNPIIIISHFMSMSVNIPSFLKKSVHW 118
YM F++ P+ I++ + ++ + + KKS HW
Sbjct: 136 YMYFVITTPVGILTERIFATILVKDYEKKSRHW 168
>Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical
protein C41G7.3 protein.
Length = 553
Score = 28.3 bits (60), Expect = 5.3
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = +1
Query: 160 DKIKMTWNIINRETGNVRNSNA---ESILKINDKIITSHQEVASAFERYFADIPASTTKS 330
+KIK W I E G + + A + I + + +IT H EV S+F +I A +
Sbjct: 240 EKIKQ-W-IPTTEVGKILGNRAAVKKHIERQFNCVITVHTEVQSSFGATPVEIVAQNKEQ 297
Query: 331 LISSPTVAESLLQDHVDECSVN 396
+ SL+Q H D+ + N
Sbjct: 298 CQEARNAVMSLMQSHQDKPASN 319
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 304 DIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGD 471
++ +SL A SLL H+DEC + I ++I F +I D
Sbjct: 527 EVVQEDNQSLEDRMNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 304 DIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGD 471
++ +SL A SLL H+DEC + I ++I F +I D
Sbjct: 527 EVVQEDNQSLEDRMNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>AC098856-4|AAL27248.2| 261|Caenorhabditis elegans Hypothetical
protein Y37F4.1 protein.
Length = 261
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +1
Query: 181 NIINRETGNVRNSNAESILKINDKIITSHQEVASAFERYFAD--IPASTTKSLIS 339
+ IN+ + +A+++LK D I H+ +A A F D +P S K L S
Sbjct: 207 DFINKSINEQKGKHADAVLKFRDDSILFHKSIAEAIP-IFDDRALPKSKEKPLKS 260
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/56 (26%), Positives = 23/56 (41%)
Frame = +1
Query: 304 DIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGD 471
++ +SL A SLL H+DEC + I ++I F +I D
Sbjct: 527 EVVQEDNQSLEDRMNQATSLLNAHLDECGPKIRHFKEGIYNVIREFNIADIASQND 582
>Z97190-1|CAB10024.1| 1111|Caenorhabditis elegans Hypothetical
protein H05G16.1 protein.
Length = 1111
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = -1
Query: 612 FKQRYYFTIFH*IRKHTIINTVIKYCSKVRCDYINNGFYNLN 487
F Y F + H T+++ V ++ + + CDY F ++N
Sbjct: 53 FHGTYVFLLQHKAIGQTLLDEVCRHLNLLECDYFGLSFIDIN 94
>Z81137-3|CAB03471.1| 338|Caenorhabditis elegans Hypothetical
protein W02D9.4 protein.
Length = 338
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Frame = +1
Query: 235 LKINDKIITSHQEVASAFERYFADIPASTTK--SLISSPTVAESLLQDH 375
L+ N+ TSH+EV +FE YFA +S +K + SS ++ + L H
Sbjct: 173 LEQNESESTSHEEVMKSFE-YFAQSSSSRSKKDANKSSKNLSSNFLAAH 220
>L80003-1|AAL77521.1| 1276|Caenorhabditis elegans guanylyl cyclase
protein.
Length = 1276
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 295 YFADIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGDL 474
YF+DI T+ S S+P +LL D +A ++DNFK ++ GD
Sbjct: 1088 YFSDIVGFTSLSSQSTPMQVVTLLND-----------LYLAFDGVVDNFKVYKVETIGDA 1136
Query: 475 W 477
+
Sbjct: 1137 Y 1137
>AF106591-5|AAK71394.1| 637|Caenorhabditis elegans Hypothetical
protein T01A4.1b protein.
Length = 637
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 295 YFADIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGDL 474
YF+DI T+ S S+P +LL D +A ++DNFK ++ GD
Sbjct: 461 YFSDIVGFTSLSSQSTPMQVVTLLND-----------LYLAFDGVVDNFKVYKVETIGDA 509
Query: 475 W 477
+
Sbjct: 510 Y 510
>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
protein T01A4.1a protein.
Length = 1217
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 295 YFADIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGDL 474
YF+DI T+ S S+P +LL D +A ++DNFK ++ GD
Sbjct: 1029 YFSDIVGFTSLSSQSTPMQVVTLLND-----------LYLAFDGVVDNFKVYKVETIGDA 1077
Query: 475 W 477
+
Sbjct: 1078 Y 1078
>AF106591-3|AAO61423.1| 1276|Caenorhabditis elegans Hypothetical
protein T01A4.1c protein.
Length = 1276
Score = 27.5 bits (58), Expect = 9.2
Identities = 18/61 (29%), Positives = 28/61 (45%)
Frame = +1
Query: 295 YFADIPASTTKSLISSPTVAESLLQDHVDECSVNFKFTNIAIKDIIDNFKTINIKKTGDL 474
YF+DI T+ S S+P +LL D +A ++DNFK ++ GD
Sbjct: 1088 YFSDIVGFTSLSSQSTPMQVVTLLND-----------LYLAFDGVVDNFKVYKVETIGDA 1136
Query: 475 W 477
+
Sbjct: 1137 Y 1137
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,575,553
Number of Sequences: 27780
Number of extensions: 274788
Number of successful extensions: 859
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 855
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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