Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15l03f
(631 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear ... 101 2e-21
AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear r... 101 2e-21
AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear r... 92 2e-18
S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear rib... 80 6e-15
CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein. 80 6e-15
BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear r... 80 6e-15
BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear r... 80 6e-15
AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear ... 80 6e-15
AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear ... 80 6e-15
X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulate... 79 1e-14
AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear r... 79 2e-14
AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear r... 68 2e-11
BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protei... 50 7e-06
BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protei... 50 7e-06
AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens ... 50 7e-06
AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein. 50 7e-06
AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG... 47 5e-05
BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein. 46 1e-04
AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protei... 46 1e-04
AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens ... 46 1e-04
AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein. 46 1e-04
AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein. 44 3e-04
BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein. 44 6e-04
Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein. 43 8e-04
X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein. 43 8e-04
U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein. 43 8e-04
BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protei... 43 8e-04
AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein. 43 8e-04
AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG... 42 0.002
AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG... 42 0.002
X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein. 41 0.003
BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein. 41 0.003
BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protei... 41 0.003
BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protei... 41 0.003
AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protei... 41 0.003
AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protei... 41 0.003
U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3 pr... 40 0.007
BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein. 40 0.007
AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element (F... 40 0.007
AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element (F... 40 0.007
AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element (F... 40 0.007
AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element (F... 40 0.007
AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain co... 40 0.010
AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain co... 40 0.010
AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH domain-con... 40 0.010
AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding pr... 40 0.010
BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein. 39 0.013
U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein prot... 37 0.051
BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein. 37 0.051
AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protei... 37 0.051
U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein. 37 0.068
U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2 pr... 37 0.068
BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein. 37 0.068
AB209366-1|BAD92603.1| 493|Homo sapiens far upstream element-bi... 36 0.090
AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing regula... 35 0.21
BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.27
BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 35 0.27
AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE p... 35 0.27
M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein ... 32 1.5
BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth fac... 32 1.5
BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein. 32 1.5
BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotei... 32 1.5
AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding pro... 32 1.5
AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinom... 32 1.5
AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein. 32 1.5
U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like RNA-... 32 1.9
AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nov... 32 1.9
U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antige... 31 2.5
BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventr... 31 2.5
BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventr... 31 2.5
AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens ... 31 3.4
AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nov... 31 3.4
AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens ... 30 5.9
AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884... 30 7.8
AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens ... 30 7.8
>AL354733-12|CAI16022.1| 379|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 379
Score = 101 bits (242), Expect = 2e-21
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 596
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 143
Query: 597 KELREKT 617
KELRE T
Sbjct: 144 KELRENT 150
>AB209562-1|BAD92799.1| 442|Homo sapiens heterogeneous nuclear
ribonucleoprotein K isoform a variant protein.
Length = 442
Score = 101 bits (242), Expect = 2e-21
Identities = 59/127 (46%), Positives = 80/127 (62%), Gaps = 2/127 (1%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 30 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 89
Query: 417 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 596
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 90 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 145
Query: 597 KELREKT 617
KELRE T
Sbjct: 146 KELRENT 152
>AL354733-9|CAI16019.1| 428|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 428
Score = 91.9 bits (218), Expect = 2e-18
Identities = 58/127 (45%), Positives = 79/127 (62%), Gaps = 2/127 (1%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSK-----------NIKALRTDYNASVSVPDSSGPERI 76
Query: 417 LSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKI 596
LSI+A D ET+ EI+K I+P L E+ + GS D + ++R+LIHQS AG +IG G+KI
Sbjct: 77 LSISA-DIETIGEILKKIIPTLEEYQHYKGS---DFDCELRLLIHQSLAGGIIGVKGAKI 132
Query: 597 KELREKT 617
KELRE T
Sbjct: 133 KELRENT 139
>S74678-1|AAB20770.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein complex K protein.
Length = 463
Score = 80.2 bits (189), Expect = 6e-15
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>CR456771-1|CAG33052.1| 464|Homo sapiens HNRPK protein.
Length = 464
Score = 80.2 bits (189), Expect = 6e-15
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>BC014980-1|AAH14980.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 80.2 bits (189), Expect = 6e-15
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>BC000355-1|AAH00355.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 80.2 bits (189), Expect = 6e-15
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>AL354733-11|CAI16021.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 464
Score = 80.2 bits (189), Expect = 6e-15
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>AL354733-10|CAI16020.1| 463|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 463
Score = 80.2 bits (189), Expect = 6e-15
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+A D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>X72727-1|CAA51267.1| 464|Homo sapiens transformation upregulated
nuclear protein protein.
Length = 464
Score = 79.4 bits (187), Expect = 1e-14
Identities = 57/142 (40%), Positives = 75/142 (52%), Gaps = 23/142 (16%)
Frame = +3
Query: 261 KRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERVLSITAE 434
KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+LSI+A
Sbjct: 34 KRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERILSISA- 92
Query: 435 DDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELDVRMLIH 551
D ET+ EI+K I+P L E N + D + ++R+LIH
Sbjct: 93 DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIH 152
Query: 552 QSRAGCVIGKAGSKIKELREKT 617
QS AG +IG G+KIKELRE T
Sbjct: 153 QSLAGGIIGVKGAKIKELRENT 174
>AY911506-1|AAW84289.1| 464|Homo sapiens heterogeneous nuclear
ribonucleoprotein K transcript variant protein.
Length = 464
Score = 78.6 bits (185), Expect = 2e-14
Identities = 57/148 (38%), Positives = 77/148 (52%), Gaps = 23/148 (15%)
Frame = +3
Query: 243 DDGPAQKRHRQTDD--EVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVPDCPGPERV 416
++ A KR R TD+ E+ L+ SK A LR+ Y AS++VPD GPER+
Sbjct: 28 EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSSGPERI 87
Query: 417 LSITAEDDETLVEIIKDIMPCL---------------------AEFHNQGGSRMGDQELD 533
LSI+ D ET+ EI+K I+P L E N + D + +
Sbjct: 88 LSIST-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCE 146
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKT 617
+R+LIHQS AG +IG G+KIKELRE T
Sbjct: 147 LRLLIHQSLAGGIIGVKGAKIKELRENT 174
>AL354733-8|CAI16018.1| 306|Homo sapiens heterogeneous nuclear
ribonucleoprotein K protein.
Length = 306
Score = 68.1 bits (159), Expect = 2e-11
Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 21/105 (20%)
Frame = +3
Query: 366 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCL--------------------- 482
QY AS++VPD GPER+LSI+A D ET+ EI+K I+P L
Sbjct: 2 QYNASVSVPDSSGPERILSISA-DIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDA 60
Query: 483 AEFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKT 617
E N + D + ++R+LIHQS AG +IG G+KIKELRE T
Sbjct: 61 VECLNYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENT 105
>BC004153-1|AAH04153.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 50.0 bits (114), Expect = 7e-06
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 521
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R++I S+ G +IGKAG+KIKE+RE TGA++
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 135
Score = 38.3 bits (85), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +RML+H G +IGK G +K +RE++ AR+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARI 51
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
>BC003008-1|AAH03008.1| 403|Homo sapiens poly(rC) binding protein 4
protein.
Length = 403
Score = 50.0 bits (114), Expect = 7e-06
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 521
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R++I S+ G +IGKAG+KIKE+RE TGA++
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 135
Score = 38.3 bits (85), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +RML+H G +IGK G +K +RE++ AR+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARI 51
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
>AK023993-1|BAB14761.1| 403|Homo sapiens protein ( Homo sapiens
cDNA FLJ13931 fis, clone Y79AA1000752, moderately
similar to PUTATIVE HETEROGENEOUS NUCLEAR
RIBONUCLEOPROTEIN X. ).
Length = 403
Score = 50.0 bits (114), Expect = 7e-06
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 521
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R++I S+ G +IGKAG+KIKE+RE TGA++
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 135
Score = 38.3 bits (85), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +RML+H G +IGK G +K +RE++ AR+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARI 51
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
>AF176330-1|AAG09241.1| 403|Homo sapiens alphaCP-4 protein.
Length = 403
Score = 50.0 bits (114), Expect = 7e-06
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 521
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R++I S+ G +IGKAG+KIKE+RE TGA++
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 135
Score = 38.3 bits (85), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +RML+H G +IGK G +K +RE++ AR+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARI 51
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
>AF257771-1|AAG02185.1| 369|Homo sapiens RNA binding protein MCG10
protein.
Length = 369
Score = 47.2 bits (107), Expect = 5e-05
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 5/93 (5%)
Frame = +3
Query: 366 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 530
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+R++I S+ G +IGKAG+KIKE+RE TGA++
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIRETTGAQV 101
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 204 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 241
>BC012061-1|AAH12061.1| 313|Homo sapiens PCBP3 protein protein.
Length = 313
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 530
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+R+++ S+ G +IGK GSKIKE+RE TGA++
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARI 47
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 248 GCIIGRQGTKINEIRQMSGAQI 269
>AY780793-1|AAV98363.1| 361|Homo sapiens poly(rC) binding protein 3
protein.
Length = 361
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 530
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+R+++ S+ G +IGK GSKIKE+RE TGA++
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARI 47
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 296 GCIIGRQGTKINEIRQMSGAQI 317
>AK094301-1|BAC04327.1| 351|Homo sapiens protein ( Homo sapiens
cDNA FLJ36982 fis, clone BRACE2006488, highly similar to
POLY(RC) BINDING PROTEIN 2. ).
Length = 351
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 530
+R + A I + + PER+++IT D + N + + +
Sbjct: 71 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 130
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+R+++ S+ G +IGK GSKIKE+RE TGA++
Sbjct: 131 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 163
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARI 79
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 286 GCIIGRQGTKINEIRQMSGAQI 307
>AF176329-1|AAG09240.1| 339|Homo sapiens alphaCP-3 protein.
Length = 339
Score = 46.0 bits (104), Expect = 1e-04
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 2/93 (2%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE--L 530
+R + A I + + PER+++IT D + N + + +
Sbjct: 39 MREESGARINISEGNCPERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPV 98
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+R+++ S+ G +IGK GSKIKE+RE TGA++
Sbjct: 99 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARI 47
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 274 GCIIGRQGTKINEIRQMSGAQI 295
>AF092441-1|AAP97216.1| 397|Homo sapiens CBP protein.
Length = 397
Score = 44.4 bits (100), Expect = 3e-04
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 521
+R Q A IT+ + ER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSFLERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R++I S+ G +IG+AG+KIKE+RE TGA++
Sbjct: 100 PPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQV 135
Score = 38.3 bits (85), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +RML+H G +IGK G +K +RE++ AR+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARI 51
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 275
>BC017098-1|AAH17098.1| 360|Homo sapiens PCBP4 protein protein.
Length = 360
Score = 43.6 bits (98), Expect = 6e-04
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGD 521
+R Q A IT+ + PER+ +IT +++ D C A + G +
Sbjct: 43 IREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSR 99
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELRE 611
+ +R++I S+ G +IGKAG+KIKE+RE
Sbjct: 100 PPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Score = 38.3 bits (85), Expect = 0.022
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +RML+H G +IGK G +K +RE++ AR+
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARI 51
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 195 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 232
>Z29505-1|CAA82631.1| 299|Homo sapiens sub2.3 protein.
Length = 299
Score = 43.2 bits (97), Expect = 8e-04
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ ++ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K +RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARI 47
>X78137-1|CAA55016.1| 356|Homo sapiens hnRNP-E1 protein.
Length = 356
Score = 43.2 bits (97), Expect = 8e-04
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ ++ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K +RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARI 47
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ I + GC+IG+ G+ I E+R+ +GA++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQI 313
>U24223-1|AAA91317.1| 356|Homo sapiens alpha-CP1 protein.
Length = 356
Score = 43.2 bits (97), Expect = 8e-04
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ ++ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K +RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARI 47
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ I + GC+IG+ G+ I E+R+ +GA++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQI 313
>BC039742-1|AAH39742.1| 356|Homo sapiens poly(rC) binding protein 1
protein.
Length = 356
Score = 43.2 bits (97), Expect = 8e-04
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ ++ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K +RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARI 47
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ I + GC+IG+ G+ I E+R+ +GA++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQI 313
>AC016700-1|AAX93191.1| 356|Homo sapiens unknown protein.
Length = 356
Score = 43.2 bits (97), Expect = 8e-04
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++T + + + I+ L E N +
Sbjct: 39 IREESGARINISEGNCPERIITLTGPTN-AIFKAFAMIIDKLEEDINSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ ++ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 40.7 bits (91), Expect = 0.004
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K +RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARI 47
Score = 31.5 bits (68), Expect = 2.5
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ I + GC+IG+ G+ I E+R+ +GA++
Sbjct: 284 LTIPNNLIGCIIGRQGANINEIRQMSGAQI 313
>AF257772-1|AAG02186.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +3
Query: 366 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 530
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 620
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 296
>AF257770-1|AAG02184.1| 424|Homo sapiens RNA binding protein MCG10
protein.
Length = 424
Score = 41.9 bits (94), Expect = 0.002
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +3
Query: 366 QYKASITVPDCPGPERVLSITAEDDE-----TLVEIIKDIMPCLAEFHNQGGSRMGDQEL 530
Q A IT+ + PER+ +IT +++ D C A + G + +
Sbjct: 12 QSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN---GGNVSRPPV 68
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTG 620
+R++I S+ G +IGKAG+KIKE+RE G
Sbjct: 69 TLRLVIPASQCGSLIGKAGTKIKEIREVRG 98
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 259 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 296
>X78136-1|CAA55015.1| 365|Homo sapiens hnRNP-E2 protein.
Length = 365
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARI 47
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ S+ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 300 GCIIGRQGAKINEIRQMSGAQI 321
>BC107688-1|AAI07689.1| 335|Homo sapiens PCBP2 protein protein.
Length = 335
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARI 47
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ S+ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 270 GCIIGRQGAKINEIRQMSGAQI 291
>BC071942-1|AAH71942.1| 366|Homo sapiens poly(rC) binding protein 2
protein.
Length = 366
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARI 47
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ S+ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 301 GCIIGRQGAKINEIRQMSGAQI 322
>BC001155-1|AAH01155.1| 362|Homo sapiens poly(rC) binding protein 2
protein.
Length = 362
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARI 47
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ S+ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 297 GCIIGRQGAKINEIRQMSGAQI 318
>AB208825-1|BAD92062.1| 373|Homo sapiens poly(rC)-binding protein 2
isoform b variant protein.
Length = 373
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARI 59
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 51 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 109
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ S+ G +IGK G KIKE+RE TGA++
Sbjct: 110 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 143
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQI 329
>AB188306-1|BAD36897.1| 331|Homo sapiens poly(rC) binding protein 2
protein.
Length = 331
Score = 41.1 bits (92), Expect = 0.003
Identities = 15/34 (44%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+H G +IGK G +K++RE++GAR+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARI 47
Score = 40.7 bits (91), Expect = 0.004
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + + PER++++ A + + I+ L E + +
Sbjct: 39 MREESGARINISEGNCPERIITL-AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPP 97
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ S+ G +IGK G KIKE+RE TGA++
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQV 131
Score = 33.1 bits (72), Expect = 0.83
Identities = 11/22 (50%), Positives = 19/22 (86%)
Frame = +3
Query: 564 GCVIGKAGSKIKELREKTGARL 629
GC+IG+ G+KI E+R+ +GA++
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQI 287
>U69127-1|AAC50893.1| 600|Homo sapiens FUSE binding protein 3
protein.
Length = 600
Score = 39.9 bits (89), Expect = 0.007
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +3
Query: 267 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 434
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 101 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 160
Query: 435 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 605
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 161 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 216
Query: 606 REKTGARL 629
+E+TG ++
Sbjct: 217 QERTGVKM 224
>BC007874-1|AAH07874.1| 261|Homo sapiens FUBP3 protein protein.
Length = 261
Score = 39.9 bits (89), Expect = 0.007
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +3
Query: 267 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 434
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 435 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 605
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 606 REKTGARL 629
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL359092-4|CAM45745.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 39.9 bits (89), Expect = 0.007
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +3
Query: 267 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 434
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 435 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 605
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 606 REKTGARL 629
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL359092-2|CAM45743.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 39.9 bits (89), Expect = 0.007
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +3
Query: 267 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 434
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 435 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 605
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 606 REKTGARL 629
+E+TG ++
Sbjct: 189 QERTGVKM 196
>AL353695-2|CAH70961.1| 261|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 261
Score = 39.9 bits (89), Expect = 0.007
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +3
Query: 267 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 434
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 13 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 72
Query: 435 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 605
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 73 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 128
Query: 606 REKTGARL 629
+E+TG ++
Sbjct: 129 QERTGVKM 136
>AL353695-1|CAH70960.1| 572|Homo sapiens far upstream element
(FUSE) binding protein 3 protein.
Length = 572
Score = 39.9 bits (89), Expect = 0.007
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 7/128 (5%)
Frame = +3
Query: 267 HRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITVP-DCPG-PER--VLSITAE 434
H++T F +P K+ ++++ I + + G PER VL+ T E
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPE 132
Query: 435 DDETLVEIIKDIMPCLAE---FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKEL 605
E ++ I+ FHN S QE+ LI S+ G VIG+ G IK+L
Sbjct: 133 SIEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQEI----LIPASKVGLVIGRGGETIKQL 188
Query: 606 REKTGARL 629
+E+TG ++
Sbjct: 189 QERTGVKM 196
>AL589765-14|CAI17175.1| 516|Homo sapiens tudor and KH domain
containing protein.
Length = 516
Score = 39.5 bits (88), Expect = 0.010
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +3
Query: 513 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARI 86
>AL589765-13|CAI17177.1| 561|Homo sapiens tudor and KH domain
containing protein.
Length = 561
Score = 39.5 bits (88), Expect = 0.010
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +3
Query: 513 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARI 86
>AF227192-1|AAF36701.1| 561|Homo sapiens tudor and KH
domain-containing protein protein.
Length = 561
Score = 39.5 bits (88), Expect = 0.010
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +3
Query: 513 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARI 86
>AF119121-1|AAD30971.1| 606|Homo sapiens putative RNA binding
protein protein.
Length = 606
Score = 39.5 bits (88), Expect = 0.010
Identities = 14/39 (35%), Positives = 28/39 (71%)
Frame = +3
Query: 513 MGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+G+ ++++ M + Q +IG+ G+ IK+LR++TGAR+
Sbjct: 48 VGEDDIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARI 86
>BC017247-1|AAH17247.1| 653|Homo sapiens FUBP1 protein protein.
Length = 653
Score = 39.1 bits (87), Expect = 0.013
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 8/143 (5%)
Frame = +3
Query: 225 KRDAYGDDGPAQKRHRQTDDEVTFLIPSKVAXXXXXXXXXXXXXLRSQYKASITV-PDCP 401
+ D++G P + +++ + +P + ++ + I + PD
Sbjct: 81 QNDSFGTQLPPMHQQQRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSG 140
Query: 402 G-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLIHQSR 560
G PER +T + L +I++ P FH+ G QE+ +I S+
Sbjct: 141 GLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MIPASK 195
Query: 561 AGCVIGKAGSKIKELREKTGARL 629
AG VIGK G IK+L+E+ G ++
Sbjct: 196 AGLVIGKGGETIKQLQERAGVKM 218
Score = 29.9 bits (64), Expect = 7.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ ++ + G +IGK G IK + +++GAR+
Sbjct: 377 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARI 409
>U05040-1|AAA17976.2| 644|Homo sapiens FUSE binding protein
protein.
Length = 644
Score = 37.1 bits (82), Expect = 0.051
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 390 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 548
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 549 HQSRAGCVIGKAGSKIKELREKTGARL 629
S+AG VIGK G IK+L+E+ G ++
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM 219
Score = 29.9 bits (64), Expect = 7.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ ++ + G +IGK G IK + +++GAR+
Sbjct: 378 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARI 410
>BC010083-1|AAH10083.1| 304|Homo sapiens FUBP1 protein protein.
Length = 304
Score = 37.1 bits (82), Expect = 0.051
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Frame = +3
Query: 390 PDCPG-PERVLSITAEDDET------LVEIIKDIMPCLAEFHNQGGSRMGDQELDVRMLI 548
PD G PER +T + L +I++ P FH+ G QE+ +I
Sbjct: 138 PDSGGLPERSCMLTGTPESVQSAKRLLDQIVEKGRPAPG-FHHGDGPGNAVQEI----MI 192
Query: 549 HQSRAGCVIGKAGSKIKELREKTGARL 629
S+AG VIGK G IK+L+E+ G ++
Sbjct: 193 PASKAGLVIGKGGETIKQLQERAGVKM 219
>AF141340-1|AAG49443.1| 276|Homo sapiens LYST-interacting protein
LIP4 protein.
Length = 276
Score = 37.1 bits (82), Expect = 0.051
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 516 GDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
G Q L+ GCVIG+ GSKI E+R+ +GA +
Sbjct: 81 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHI 118
>U94832-1|AAB53222.1| 711|Homo sapiens KSRP protein.
Length = 711
Score = 36.7 bits (81), Expect = 0.068
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = +3
Query: 390 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 542
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 543 LIHQSRAGCVIGKAGSKIKELREKTGARL 629
+I +AG VIGK G IK+L+E+ G ++
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKM 267
>U69126-1|AAC50892.1| 652|Homo sapiens FUSE binding protein 2
protein.
Length = 652
Score = 36.7 bits (81), Expect = 0.068
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = +3
Query: 390 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 542
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 126 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 182
Query: 543 LIHQSRAGCVIGKAGSKIKELREKTGARL 629
+I +AG VIGK G IK+L+E+ G ++
Sbjct: 183 MIPAGKAGLVIGKGGETIKQLQERAGVKM 211
>BC085004-1|AAH85004.1| 710|Homo sapiens KHSRP protein protein.
Length = 710
Score = 36.7 bits (81), Expect = 0.068
Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Frame = +3
Query: 390 PDCPG-PERVLSITA--EDDETLVEIIKDIMPC-----LAEFH-NQGGSRMGDQELDVRM 542
PD G PER +S+T E + ++ DI+ +FH N G + G + +
Sbjct: 182 PDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQ---EI 238
Query: 543 LIHQSRAGCVIGKAGSKIKELREKTGARL 629
+I +AG VIGK G IK+L+E+ G ++
Sbjct: 239 MIPAGKAGLVIGKGGETIKQLQERAGVKM 267
>AB209366-1|BAD92603.1| 493|Homo sapiens far upstream
element-binding protein variant protein.
Length = 493
Score = 36.3 bits (80), Expect = 0.090
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 489 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
FH+ G QE+ +I S+AG VIGK G IK+L+E+ G ++
Sbjct: 27 FHHGDGPGNAVQEI----MIPASKAGLVIGKGGETIKQLQERAGVKM 69
Score = 29.9 bits (64), Expect = 7.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +3
Query: 531 DVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ ++ + G +IGK G IK + +++GAR+
Sbjct: 228 EFNFIVPTGKTGLIIGKGGETIKSISQQSGARI 260
>AB209662-1|BAD92899.1| 384|Homo sapiens KH-type splicing
regulatory protein (FUSE binding protein 2) variant
protein.
Length = 384
Score = 35.1 bits (77), Expect = 0.21
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 486 EFH-NQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+FH N G + G + ++I +AG VIGK G IK+L+E+ G ++
Sbjct: 40 QFHDNANGGQNGTVQ---EIMIPAGKAGLVIGKGGETIKQLQERAGVKM 85
>BC067878-1|AAH67878.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.27
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 489 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
F +QG G +E + I + G VIG +GSKIK+L+ T ++
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKI 82
>BC051703-1|AAH51703.1| 631|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 53 protein.
Length = 631
Score = 34.7 bits (76), Expect = 0.27
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 489 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
F +QG G +E + I + G VIG +GSKIK+L+ T ++
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKI 82
>AY039237-1|AAK72102.1| 630|Homo sapiens DEAD-box protein CAGE
protein.
Length = 630
Score = 34.7 bits (76), Expect = 0.27
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 489 FHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
F +QG G +E + I + G VIG +GSKIK+L+ T ++
Sbjct: 36 FGHQGPRAAGSREPPLCFKIKNNMVGVVIGYSGSKIKDLQHSTNTKI 82
>M64098-1|AAA35962.1| 1268|Homo sapiens high density lipoprotein
binding protein protein.
Length = 1268
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 536
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREK 614
++I Q +IG+ G +I+E+R+K
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDK 536
>BC021290-1|AAH21290.1| 598|Homo sapiens insulin-like growth factor
2 mRNA binding protein 2 protein.
Length = 598
Score = 32.3 bits (70), Expect = 1.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+E+ +++L H G +IGK G +K++ +TG ++
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKI 307
>BC014305-1|AAH14305.2| 898|Homo sapiens HDLBP protein protein.
Length = 898
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 536
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 91 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 140
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREK 614
++I Q +IG+ G +I+E+R+K
Sbjct: 141 DLIIEQRFHRTIIGQKGERIREIRDK 166
>BC001179-1|AAH01179.1| 1268|Homo sapiens high density lipoprotein
binding protein (vigilin) protein.
Length = 1268
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 536
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREK 614
++I Q +IG+ G +I+E+R+K
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDK 536
>AF117107-1|AAD09827.1| 598|Homo sapiens IGF-II mRNA-binding
protein 2 protein.
Length = 598
Score = 32.3 bits (70), Expect = 1.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+E+ +++L H G +IGK G +K++ +TG ++
Sbjct: 272 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKI 307
>AF057352-1|AAD31596.1| 556|Homo sapiens hepatocellular carcinoma
autoantigen protein.
Length = 556
Score = 32.3 bits (70), Expect = 1.5
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +3
Query: 522 QELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+E+ +++L H G +IGK G +K++ +TG ++
Sbjct: 273 EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKI 308
>AC104841-2|AAY14717.1| 1268|Homo sapiens unknown protein.
Length = 1268
Score = 32.3 bits (70), Expect = 1.5
Identities = 27/86 (31%), Positives = 43/86 (50%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 536
++ QYK S+ +P P E+ I E D V+ K + LA SRM + E
Sbjct: 461 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRM-ENERTK 510
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREK 614
++I Q +IG+ G +I+E+R+K
Sbjct: 511 DLIIEQRFHRTIIGQKGERIREIRDK 536
>U70477-1|AAB88661.1| 498|Homo sapiens astrocytic NOVA-like
RNA-binding protein protein.
Length = 498
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 507 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
S G++ E +++LI AG +IGK G I +L+++TGA +
Sbjct: 31 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 72
>AF083898-1|AAC72355.1| 492|Homo sapiens RNA-binding protein Nova-2
protein.
Length = 492
Score = 31.9 bits (69), Expect = 1.9
Identities = 16/42 (38%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 507 SRMGDQ-ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
S G++ E +++LI AG +IGK G I +L+++TGA +
Sbjct: 25 SNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 66
>U04840-1|AAA16022.1| 510|Homo sapiens onconeural ventral antigen-1
protein.
Length = 510
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 519 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
D + +++LI AG +IGK G I +L+++TGA +
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
>BC075039-1|AAH75039.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 519 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
D + +++LI AG +IGK G I +L+++TGA +
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
>BC075038-1|AAH75038.1| 507|Homo sapiens neuro-oncological ventral
antigen 1 protein.
Length = 507
Score = 31.5 bits (68), Expect = 2.5
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 519 DQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
D + +++LI AG +IGK G I +L+++TGA +
Sbjct: 47 DGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 83
>AK127833-1|BAC87153.1| 847|Homo sapiens protein ( Homo sapiens
cDNA FLJ45936 fis, clone PLACE7004103, highly similar
to Vigilin. ).
Length = 847
Score = 31.1 bits (67), Expect = 3.4
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDV 536
++ QYK S+ +P P E+ I E D V+ K + LA SR+ + E
Sbjct: 144 IKDQYKVSVRIP--PDSEKSNLIRIEGDPQGVQQAKRELLELA-------SRL-ENERTK 193
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREK 614
++I Q +IG+ G +I+E+R+K
Sbjct: 194 DLIIEQRFHRTIIGQKGERIREIRDK 219
>AC006540-1|AAD13116.1| 464|Homo sapiens RNA-binding protein Nova-2
[AA 29-492] protein.
Length = 464
Score = 31.1 bits (67), Expect = 3.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 525 ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
E +++LI AG +IGK G I +L+++TGA +
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATI 38
>AK001746-1|BAA91878.1| 440|Homo sapiens protein ( Homo sapiens
cDNA FLJ10884 fis, clone NT2RP4001950. ).
Length = 440
Score = 30.3 bits (65), Expect = 5.9
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 429 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE-LDVRMLIHQSRAG 566
A ++ E++KD++P E NQGG + G QE D ++ + RAG
Sbjct: 189 ASQKSSMKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAG 234
>AL162739-7|CAI19299.1| 865|Homo sapiens novel protein (FLJ10884)
protein.
Length = 865
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 429 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE-LDVRMLIHQSRAG 566
A ++ E++KD++P E NQGG + G QE D ++ + RAG
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAG 348
>AK001973-1|BAA92011.1| 865|Homo sapiens protein ( Homo sapiens
cDNA FLJ11111 fis, clone PLACE1005923. ).
Length = 865
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +3
Query: 429 AEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQE-LDVRMLIHQSRAG 566
A ++ E++KD++P E NQGG + G QE D ++ + RAG
Sbjct: 303 ASQKSSVKELLKDVLPQKEEI-NQGGRKYGIQEKRDKTLIDSKHRAG 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,096,347
Number of Sequences: 237096
Number of extensions: 1865085
Number of successful extensions: 7628
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 7445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7605
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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