Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15l03f
(631 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 91 5e-19
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 91 5e-19
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 43 2e-04
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 36 0.018
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 36 0.018
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 36 0.018
U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical pr... 32 0.29
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 32 0.29
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 32 0.29
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 30 1.2
AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf famil... 28 4.8
AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical... 28 4.8
AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical ... 28 4.8
AC025726-26|AAK73933.2| 129|Caenorhabditis elegans Hypothetical... 28 6.3
Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 8.4
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 8.4
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 8.4
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 8.4
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 91.5 bits (217), Expect = 5e-19
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Frame = +3
Query: 222 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 365
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 1 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 60
Query: 366 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 545
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 61 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSER------DPCEVRML 113
Query: 546 IHQSRAGCVIGKAGSKIKELREKTGARL 629
+HQS AG +IG+ GSKIKELREK ARL
Sbjct: 114 VHQSHAGALIGRNGSKIKELREKCSARL 141
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 91.5 bits (217), Expect = 5e-19
Identities = 59/148 (39%), Positives = 83/148 (56%), Gaps = 12/148 (8%)
Frame = +3
Query: 222 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 365
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 366 QYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQGGSRMGDQELDVRML 545
++ A + VPD PERV ++TA D++T++ I+KD++P L + ++ +VRML
Sbjct: 78 EFNAHVQVPDSNTPERVCTVTA-DEKTVLNILKDVLPRLEDNFSER------DPCEVRML 130
Query: 546 IHQSRAGCVIGKAGSKIKELREKTGARL 629
+HQS AG +IG+ GSKIKELREK ARL
Sbjct: 131 VHQSHAGALIGRNGSKIKELREKCSARL 158
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 42.7 bits (96), Expect = 2e-04
Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)
Frame = +3
Query: 357 LRSQYKASITVPDCPGPERVLSITAEDDETLVEIIKDIMPCLAEFHNQG---GSRMGDQE 527
+R + A I + D PER+++IT TL I K +F + +
Sbjct: 97 IREESGAKINISDGSCPERIVTITG----TLGVIGKAFNMVCNKFEEDMLLLPNSVPKPP 152
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ +R+++ ++ G +IGK GSKIK++RE TGA +
Sbjct: 153 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASI 186
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 528 LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
L +R+L+ G +IGK G +IK++RE++GA++
Sbjct: 72 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKI 105
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 42.3 bits (95), Expect = 3e-04
Identities = 39/159 (24%), Positives = 72/159 (45%), Gaps = 17/159 (10%)
Frame = +3
Query: 204 TLLGIKMKRDAYGDDGPAQKR-HRQTDDE------VTFLIPSKVAXXXXXXXXXXXXXLR 362
T G+K +DA DGPA K+ H ++E + LIPS L+
Sbjct: 11 TQQGVKRTQDA--SDGPANKKAHFGGEEEGGDHLSIKILIPSNAVGAIIGKGGEAMRNLK 68
Query: 363 SQYKASITVPD----CPGPERVLSITAEDDETLVEIIKDIMPCLAE-FHNQGGSRMGDQE 527
+ + + PG + + ++ +I+ I + E +QGGS D +
Sbjct: 69 NDNNCRVQMSKNSETYPGTSERICLVKGRLNNIMAVIESIQDKIREKCADQGGSDAFDHK 128
Query: 528 -----LDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
++++++ + AG VIGK+G+ IK++RE+ G ++
Sbjct: 129 NTSRGAEIKIVMPNTSAGMVIGKSGANIKDIREQFGCQI 167
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+RM H G +IGKAGS IKE+ +KTG +
Sbjct: 277 LRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNI 308
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 37.1 bits (82), Expect = 0.010
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +3
Query: 534 VRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+RM H G +IGKAGS IKE+ +KTG +
Sbjct: 401 LRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNI 432
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +3
Query: 390 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 557
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 44 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 101
Query: 558 RAGCVIGKAGSKIKELREKTGARL 629
R G +IGK+G I++L+EK+G ++
Sbjct: 102 RCGLIIGKSGDTIRQLQEKSGCKM 125
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 486 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ H+ GG G +++ +S G +IGK G IK L +TG ++
Sbjct: 174 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKI 219
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +3
Query: 390 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 557
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 107 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 164
Query: 558 RAGCVIGKAGSKIKELREKTGARL 629
R G +IGK+G I++L+EK+G ++
Sbjct: 165 RCGLIIGKSGDTIRQLQEKSGCKM 188
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 486 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ H+ GG G +++ +S G +IGK G IK L +TG ++
Sbjct: 237 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKI 282
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 36.3 bits (80), Expect = 0.018
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Frame = +3
Query: 390 PDCPGPERVLSITAEDDETLVEIIKDIM-PCLAEFHN---QGGSRMGDQELDVRMLIHQS 557
PD V +T E + VE K ++ +A N Q G +D+ I +
Sbjct: 85 PDADPSSGVRMVTLEGSRSNVETAKHLINEVVARSQNPRPQYGFPRAQTTIDIA--IPPN 142
Query: 558 RAGCVIGKAGSKIKELREKTGARL 629
R G +IGK+G I++L+EK+G ++
Sbjct: 143 RCGLIIGKSGDTIRQLQEKSGCKM 166
Score = 31.1 bits (67), Expect = 0.68
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 486 EFHNQGGSRMGDQELDVRMLIHQSRAGCVIGKAGSKIKELREKTGARL 629
+ H+ GG G +++ +S G +IGK G IK L +TG ++
Sbjct: 215 QMHHAGGG--GGASARGEVVVPRSSVGIIIGKQGDTIKRLAMETGTKI 260
>U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical
protein F26B1.2e protein.
Length = 93
Score = 32.3 bits (70), Expect = 0.29
Identities = 25/76 (32%), Positives = 33/76 (43%), Gaps = 12/76 (15%)
Frame = +3
Query: 222 MKRDAYGDDGPAQKRHRQ--TDD----------EVTFLIPSKVAXXXXXXXXXXXXXLRS 365
MKR+ DDG RH++ TD EV L+ SK A LR+
Sbjct: 18 MKREHDNDDGDRTGRHKRPKTDGFTEAIQQGKFEVRLLVSSKSAGAIIGKGGENIKRLRA 77
Query: 366 QYKASITVPDCPGPER 413
++ A + VPD PER
Sbjct: 78 EFNAHVQVPDSNTPER 93
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 495 NQGGSRMGDQ--ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGAR 626
NQ G++ G E+ MLI + G VIGK G I+ ++E++G R
Sbjct: 78 NQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLR 123
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 498 QGGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELREKTGARL 629
Q G G QE + +++ + AG +IGK G IK L +TG ++
Sbjct: 181 QFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKI 226
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGA 623
M + + G VIGK G IK++ +TGA
Sbjct: 289 MHVPAGKCGLVIGKGGENIKQIERETGA 316
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 32.3 bits (70), Expect = 0.29
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 495 NQGGSRMGDQ--ELDVRMLIHQSRAGCVIGKAGSKIKELREKTGAR 626
NQ G++ G E+ MLI + G VIGK G I+ ++E++G R
Sbjct: 125 NQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLR 170
Score = 31.5 bits (68), Expect = 0.51
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +3
Query: 498 QGGSRMGDQELDVR--MLIHQSRAGCVIGKAGSKIKELREKTGARL 629
Q G G QE + +++ + AG +IGK G IK L +TG ++
Sbjct: 228 QFGGGYGAQEAQAKGEVIVPRLSAGMIIGKGGEMIKRLAAETGTKI 273
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGA 623
M + + G VIGK G IK++ +TGA
Sbjct: 336 MHVPAGKCGLVIGKGGENIKQIERETGA 363
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 540 MLIHQSRAGCVIGKAGSKIKELREKTGA 623
MLI S+ G VIG+ G I+++ +++GA
Sbjct: 415 MLIPASKCGLVIGRGGETIRQINKESGA 442
>AY551965-1|AAS65429.1| 2395|Caenorhabditis elegans Swi/Snf family
ATPase protein.
Length = 2395
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 213 PIKFRAPTITLDHTFIDRLKDTKALKHKQYTFRYKNLVKSKLDLNIKTLKMAAT 52
PI + + L HT + L+ + QY Y L K K++++AAT
Sbjct: 1787 PISKKTMKVDLSHTELSHLRKGRMTTESQYAHDYGILTDKKHVNRFKSVRVAAT 1840
>AL132904-26|CAC35851.3| 2395|Caenorhabditis elegans Hypothetical
protein Y111B2A.22 protein.
Length = 2395
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -2
Query: 213 PIKFRAPTITLDHTFIDRLKDTKALKHKQYTFRYKNLVKSKLDLNIKTLKMAAT 52
PI + + L HT + L+ + QY Y L K K++++AAT
Sbjct: 1787 PISKKTMKVDLSHTELSHLRKGRMTTESQYAHDYGILTDKKHVNRFKSVRVAAT 1840
>AF026215-3|AAB71323.3| 563|Caenorhabditis elegans Hypothetical
protein F09G2.5 protein.
Length = 563
Score = 28.3 bits (60), Expect = 4.8
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -3
Query: 452 HERFVIFSCYGEYPFGAG-AIWDCYRGFVLASEL 354
++RFV C G YP G A W C +G+++ L
Sbjct: 304 NKRFV--KCAGPYPMFRGEAAWSCIQGYIVMKRL 335
>AC025726-26|AAK73933.2| 129|Caenorhabditis elegans Hypothetical
protein Y71G12B.7 protein.
Length = 129
Score = 27.9 bits (59), Expect = 6.3
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -3
Query: 461 NDFHERFVIFSCYGEYPFGAGAIW 390
N H R IF C+GE+ F IW
Sbjct: 94 NCIHSRLSIFFCFGEFMFILKLIW 117
>Z75542-2|CAA99862.2| 712|Caenorhabditis elegans Hypothetical
protein F55D12.2 protein.
Length = 712
Score = 27.5 bits (58), Expect = 8.4
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 448 SWKSLKISCRAWQNFITRVD 507
SW S +I + WQN++ VD
Sbjct: 151 SWLSKRIEIKKWQNYLVEVD 170
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREKTGA 623
++ I A VIGK GS + +RE TGA
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGA 1825
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREKTGA 623
++ I A VIGK GS + +RE TGA
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGA 1825
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREKTGA 623
++ I A VIGK GS + +RE TGA
Sbjct: 618 KLTIPAYAASRVIGKGGSNVNAVREATGA 646
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREKTGA 623
++ I A VIGK GS + +RE TGA
Sbjct: 618 KLTIPAYAASRVIGKGGSNVNAVREATGA 646
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREKTGA 623
++ I A VIGK GS + +RE TGA
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGA 1825
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 537 RMLIHQSRAGCVIGKAGSKIKELREKTGA 623
++ I A VIGK GS + +RE TGA
Sbjct: 1797 KLTIPAYAASRVIGKGGSNVNAVREATGA 1825
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,004,558
Number of Sequences: 27780
Number of extensions: 286356
Number of successful extensions: 745
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 737
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -