Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15k16f
(562 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical ... 121 4e-28
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 71 6e-13
U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical pr... 64 5e-11
U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical pr... 61 5e-10
AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical ... 60 8e-10
Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical pr... 60 1e-09
Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical pr... 59 2e-09
AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical ... 59 2e-09
Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical pr... 53 2e-07
U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical pr... 53 2e-07
AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical ... 29 3.0
Z81454-4|CAD89725.1| 483|Caenorhabditis elegans Hypothetical pr... 28 4.0
U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical p... 28 4.0
AL031632-5|CAE11314.1| 324|Caenorhabditis elegans Hypothetical ... 28 4.0
AC084159-11|ABO16465.1| 449|Caenorhabditis elegans F-box a prot... 28 4.0
U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical pr... 28 5.3
AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein. 27 9.2
AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nucl... 27 9.2
>AL021474-4|CAD54164.1| 445|Caenorhabditis elegans Hypothetical
protein Y32F6A.5 protein.
Length = 445
Score = 121 bits (291), Expect = 4e-28
Identities = 58/157 (36%), Positives = 89/157 (56%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
+++D+GYV +R AH FWWL Y P ++RPL +WLQ NFE GP
Sbjct: 30 YDEDWGYVDIRTNAHTFWWL-YAAKPAN--SQRPLFLWLQGGPGSSSSGFGNFEETGPKT 86
Query: 271 LSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPE 450
L+ + +W++ ++++VDNPVG GFSYVD+ T +I D + +R F PE
Sbjct: 87 LNGSDNPATWLQVADMVYVDNPVGAGFSYVDDKSAYTTEITQIGKDLLAWLRKFLALHPE 146
Query: 451 FNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
+ P YI+ +SYGGKM+ + ++ KAG+++ N
Sbjct: 147 YRTRPFYIFCESYGGKMSAQFAKVITDSIKAGSLQLN 183
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 70.9 bits (166), Expect = 6e-13
Identities = 52/163 (31%), Positives = 76/163 (46%), Gaps = 7/163 (4%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
F+Q GY+ G ++ +WL + T PLI+WL E LGP
Sbjct: 1147 FKQYSGYLNASAGNYLHYWLVESQLNA---TYDPLILWLNGGPGCSSIGGF-LEELGPFH 1202
Query: 271 LS-----LQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQL-TKTNDEI-ALDFVELMRG 429
++ L E SW K NVLF++ P G+S+ N T ND A D V +
Sbjct: 1203 VNADGKTLFENTFSWNKAGNVLFLEAPRDVGYSFRSNEFAPDTMYNDTYTASDTVLALAS 1262
Query: 430 FYNRRPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRS 558
F+N+ PE+ + P YI G+SYGG + + A + GTI++
Sbjct: 1263 FFNKFPEYQNRPFYITGESYGGIYVPTLTRALINAIQTGTIKN 1305
Score = 67.7 bits (158), Expect = 5e-12
Identities = 47/141 (33%), Positives = 67/141 (47%), Gaps = 6/141 (4%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEI----L 258
F Q GY+ G +F+W + + E P+I+WLQ EI +
Sbjct: 1680 FMQHSGYLQATRGNKLFYWFVESQSGNEG---DPIILWLQGGPGCASTGGLFSEIGPFFV 1736
Query: 259 GPLDLSLQERNHSWVKNFNVLFVDNPVGTGFSYVD-NV-MQLTKTNDEIALDFVELMRGF 432
P +L E +SW K ++L +D+P G GFSY D NV T +D+ ALD + F
Sbjct: 1737 NPDGETLFENIYSWNKAAHILIIDSPRGVGFSYQDKNVNNDTTWDDDKTALDTYTALEDF 1796
Query: 433 YNRRPEFNDVPLYIYGQSYGG 495
+ P + LYI G+SYGG
Sbjct: 1797 FVTYPPHRNSELYITGESYGG 1817
Score = 60.1 bits (139), Expect = 1e-09
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 7/142 (4%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
F+Q GY+ +G H+ +WL + + P+++WL E GP
Sbjct: 41 FKQYSGYLDGSQGNHLHYWLVESQTNPQT---APIVLWLNGGPGCSSLLGLLSEN-GPYR 96
Query: 271 L-----SLQERNHSWVKNFNVLFVDNPVGTGFSYVDN--VMQLTKTNDEIALDFVELMRG 429
+ ++ E +SW K NVLF+++P GFSY + L +D+ A D +
Sbjct: 97 IQKDGVTVIENVNSWNKAANVLFLESPRDVGFSYREKSATPDLLYNDDKTATDNALALVQ 156
Query: 430 FYNRRPEFNDVPLYIYGQSYGG 495
F+ R PE+ YI G+SYGG
Sbjct: 157 FFQRFPEYQGRDFYITGESYGG 178
Score = 54.8 bits (126), Expect = 4e-08
Identities = 41/142 (28%), Positives = 64/142 (45%), Gaps = 7/142 (4%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
F+Q GY+ G ++ +W + T PL++WL E LGP
Sbjct: 589 FKQYSGYLNGVTGNYLHYWFVESQG---NPTTDPLVLWLTGGPGCSGLMAMLTE-LGPFH 644
Query: 271 -----LSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDE--IALDFVELMRG 429
+L E +SW K NV+F+++P G GFS D + D+ A D ++
Sbjct: 645 PNPDGKTLFENVYSWNKAANVIFLESPRGVGFSVQDPSLNNDTIWDDQRTATDTYLALKD 704
Query: 430 FYNRRPEFNDVPLYIYGQSYGG 495
F PE+ + P ++ G+SYGG
Sbjct: 705 FLTVYPEYINRPFFVTGESYGG 726
>U28730-5|AAA68259.1| 470|Caenorhabditis elegans Hypothetical
protein K10B2.2a protein.
Length = 470
Score = 64.5 bits (150), Expect = 5e-11
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Frame = +1
Query: 106 GYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLDL---- 273
GY+ ++ +WL T T+ PL++WL E LGP +
Sbjct: 43 GYLRAWTDKYLHYWL---TESSRAPTQDPLVLWLNGGPGCSSLDGL-IEELGPFHVKDFG 98
Query: 274 -SLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPE 450
S+ ++W K NVLF+++P G G+SY N LT ++DE++L + F ++ PE
Sbjct: 99 NSIYYNEYAWNKFANVLFLESPAGVGYSYSTN-FNLTVSDDEVSLHNYMALLDFLSKFPE 157
Query: 451 FNDVPLYIYGQSYGGKMAIDMGLRMHEAEK 540
+ +I G+SY G + +R+ +K
Sbjct: 158 YKGRDFWITGESYAGVYIPTLAVRILNDKK 187
>U23521-6|AAC46812.1| 469|Caenorhabditis elegans Hypothetical
protein F41C3.5 protein.
Length = 469
Score = 61.3 bits (142), Expect = 5e-10
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Frame = +1
Query: 19 KKMSLLYFFLAVLFSKSVSGQFG-PFEQDF----GYVTVREGAHMFWWLFYTTAPVEKYT 183
K + LL FF+ V + + G FE +F G+ V + + +W + + +
Sbjct: 2 KTLLLLAFFVGVTCGEEIKDLPGLDFEPNFKHYSGFFQVSDNHVLHYWFVESQ---NEPS 58
Query: 184 ERPLIVWLQXXXXXXXXXXXNFEILGPL-----DLSLQERNHSWVKNFNVLFVDNPVGTG 348
PLI W E +GP +L+E +SW K +V+++++P G G
Sbjct: 59 NDPLIFWFNGGPGCSSLDGLLNE-MGPYVANEDGKTLRENEYSWNKMASVVYIESPAGVG 117
Query: 349 FSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPEFNDVPLYIYGQSYGGKMAIDMGLRMH 528
+SY + +T +D +L+ E ++ F+ P+F +I G+SYGG + R+
Sbjct: 118 YSYATD-GNITTNDDLTSLENYEAVKQFFTEFPQFRHHQTFIMGESYGGVYVPTLTARIV 176
Query: 529 EAEK 540
+ +K
Sbjct: 177 DGQK 180
>AF078792-2|AAC26946.1| 512|Caenorhabditis elegans Hypothetical
protein Y40D12A.2 protein.
Length = 512
Score = 60.5 bits (140), Expect = 8e-10
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Frame = +1
Query: 106 GYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLDLSL-- 279
GY+++ + +F+W Y + T P+++WL E +GP +
Sbjct: 39 GYLSISDVKQLFYW--YVESEESPETA-PVVLWLNGGPGCASMEGLFIE-MGPFRVRNYG 94
Query: 280 QERNHS---WVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPE 450
+E N + W + N++++D P G GFSY N + T+DE+A D ++ ++ R PE
Sbjct: 95 EEVNRNPWTWNRIANIIYLDAPAGVGFSYY-NTTKKVFTDDEVAQDNFNALKMWFARFPE 153
Query: 451 FNDVPLYIYGQSYGGKMAIDMGLRMHEA 534
YI G+SYGG + R+ +A
Sbjct: 154 RKTNDFYIAGESYGGTYVPMLSARITKA 181
>Z54342-1|CAA91143.1| 505|Caenorhabditis elegans Hypothetical
protein C08H9.1 protein.
Length = 505
Score = 59.7 bits (138), Expect = 1e-09
Identities = 42/137 (30%), Positives = 60/137 (43%), Gaps = 7/137 (5%)
Frame = +1
Query: 106 GYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLDL---- 273
GY+ E + F A E LI+W FE GPL +
Sbjct: 40 GYLNANENGTQKMFYFLLEARDIPVGEASLIIWFNGGPGCSSLSAF-FEEFGPLYVNFGG 98
Query: 274 -SLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDE-IA-LDFVELMRGFYNRR 444
SL E HSW N+LF+++P+G GFSY TK ND+ IA +F ++ F +
Sbjct: 99 KSLFENVHSWYHKANILFLESPIGVGFSYDTEQSNFTKVNDDSIAEQNFNSVIDFFQRKH 158
Query: 445 PEFNDVPLYIYGQSYGG 495
+ + +I +SYGG
Sbjct: 159 SSYVNHDFFIAAESYGG 175
>Z93339-1|CAB07544.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
F+Q G++ G + +WL + + PL++WL FE GP
Sbjct: 1562 FKQYSGFLDGLSGHKVHYWLVESE---NNPSTDPLLLWLNGGPGSSSLMGL-FEENGPFR 1617
Query: 271 LS-----LQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFY 435
+S L +SW K NVL++++P+G G+SY N + + A + ++ F+
Sbjct: 1618 VSKDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNNTNIQYDDVTTAQENYAALKSFF 1677
Query: 436 NRRPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
+ P++ Y G+SY G + + + K+G I N
Sbjct: 1678 AQYPQYTTSDFYTTGESYAGVYLPGLSALLVQGIKSGDININ 1719
Score = 58.4 bits (135), Expect = 3e-09
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPL- 267
F Q GY+ + H F + F + T P+++WL E GP
Sbjct: 516 FNQYSGYLNASD-THRFHYWFVESQ--NDPTNSPVLLWLNGGPGSSSLWGMLTEN-GPFR 571
Query: 268 ----DLSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFY 435
+L E HSW K NVL++++P G+SY T +D A D ++ F+
Sbjct: 572 PNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTYGDDLTASDNYNALKDFF 631
Query: 436 NR-RPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
N P++ P YI G+SYGG + + + AG I N
Sbjct: 632 NNIFPQYKQNPFYITGESYGGVYIPTLSKLLLQMLSAGEININ 674
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Frame = +1
Query: 106 GYVTVREGA--HMFWWLFYT-TAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD-- 270
GY+T E H+F+W + PV P+++WL F LGP
Sbjct: 1044 GYLTADETPLNHLFYWFVESQNDPVND----PVVLWLNGGPGCSSLGGF-FTELGPFHPN 1098
Query: 271 ----LSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYN 438
+L E SW K NV+F++ P GFSY ++ +D A + ++ F+
Sbjct: 1099 DDGGQTLYENVFSWNKKANVIFLEAPAKVGFSYTED-PNYYWDDDTTAQNNGYAIKSFFQ 1157
Query: 439 RR-PEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
++ P++ +I G+SYGG + L + + AG + N
Sbjct: 1158 KKFPQYAQNQFFITGESYGGVYCPTLTLNLVQQIDAGILNLN 1199
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 274 SLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPEF 453
++ E +W K N+L +D P G GFS+ N+ Q + + + + FY P
Sbjct: 111 TVYENVFAWNKVSNLLAIDGP-GAGFSWQQNLFQ---DDSYVTGALLNALMDFYTVYPNM 166
Query: 454 NDVPLYIYGQSYGGKMA 504
+ LYI G+ YG A
Sbjct: 167 LNSDLYIAGEGYGSFFA 183
>Z70203-7|CAA94110.1| 2105|Caenorhabditis elegans Hypothetical protein
Y16B4A.2 protein.
Length = 2105
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
F+Q G++ G + +WL + + PL++WL FE GP
Sbjct: 1562 FKQYSGFLDGLSGHKVHYWLVESE---NNPSTDPLLLWLNGGPGSSSLMGL-FEENGPFR 1617
Query: 271 LS-----LQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFY 435
+S L +SW K NVL++++P+G G+SY N + + A + ++ F+
Sbjct: 1618 VSKDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNNTNIQYDDVTTAQENYAALKSFF 1677
Query: 436 NRRPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
+ P++ Y G+SY G + + + K+G I N
Sbjct: 1678 AQYPQYTTSDFYTTGESYAGVYLPGLSALLVQGIKSGDININ 1719
Score = 58.4 bits (135), Expect = 3e-09
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPL- 267
F Q GY+ + H F + F + T P+++WL E GP
Sbjct: 516 FNQYSGYLNASD-THRFHYWFVESQ--NDPTNSPVLLWLNGGPGSSSLWGMLTEN-GPFR 571
Query: 268 ----DLSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFY 435
+L E HSW K NVL++++P G+SY T +D A D ++ F+
Sbjct: 572 PNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTYGDDLTASDNYNALKDFF 631
Query: 436 NR-RPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
N P++ P YI G+SYGG + + + AG I N
Sbjct: 632 NNIFPQYKQNPFYITGESYGGVYIPTLSKLLLQMLSAGEININ 674
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Frame = +1
Query: 106 GYVTVREGA--HMFWWLFYT-TAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD-- 270
GY+T E H+F+W + PV P+++WL F LGP
Sbjct: 1044 GYLTADETPLNHLFYWFVESQNDPVND----PVVLWLNGGPGCSSLGGF-FTELGPFHPN 1098
Query: 271 ----LSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYN 438
+L E SW K NV+F++ P GFSY ++ +D A + ++ F+
Sbjct: 1099 DDGGQTLYENVFSWNKKANVIFLEAPAKVGFSYTED-PNYYWDDDTTAQNNGYAIKSFFQ 1157
Query: 439 RR-PEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
++ P++ +I G+SYGG + L + + AG + N
Sbjct: 1158 KKFPQYAQNQFFITGESYGGVYCPTLTLNLVQQIDAGILNLN 1199
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 274 SLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPEF 453
++ E +W K N+L +D P G GFS+ N+ Q + + + + FY P
Sbjct: 111 TVYENVFAWNKVSNLLAIDGP-GAGFSWQQNLFQ---DDSYVTGALLNALMDFYTVYPNM 166
Query: 454 NDVPLYIYGQSYGGKMA 504
+ LYI G+ YG A
Sbjct: 167 LNSDLYIAGEGYGSFFA 183
>AL023825-2|CAA19443.1| 2105|Caenorhabditis elegans Hypothetical
protein Y16B4A.2 protein.
Length = 2105
Score = 58.8 bits (136), Expect = 2e-09
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 5/162 (3%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD 270
F+Q G++ G + +WL + + PL++WL FE GP
Sbjct: 1562 FKQYSGFLDGLSGHKVHYWLVESE---NNPSTDPLLLWLNGGPGSSSLMGL-FEENGPFR 1617
Query: 271 LS-----LQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFY 435
+S L +SW K NVL++++P+G G+SY N + + A + ++ F+
Sbjct: 1618 VSKDSQTLSRNPYSWNKFANVLYLESPIGVGYSYAYNNTNIQYDDVTTAQENYAALKSFF 1677
Query: 436 NRRPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
+ P++ Y G+SY G + + + K+G I N
Sbjct: 1678 AQYPQYTTSDFYTTGESYAGVYLPGLSALLVQGIKSGDININ 1719
Score = 58.4 bits (135), Expect = 3e-09
Identities = 46/163 (28%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPL- 267
F Q GY+ + H F + F + T P+++WL E GP
Sbjct: 516 FNQYSGYLNASD-THRFHYWFVESQ--NDPTNSPVLLWLNGGPGSSSLWGMLTEN-GPFR 571
Query: 268 ----DLSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFY 435
+L E HSW K NVL++++P G+SY T +D A D ++ F+
Sbjct: 572 PNKDGQTLYENVHSWNKFANVLYLESPHQVGYSYSTVANDYTYGDDLTASDNYNALKDFF 631
Query: 436 NR-RPEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
N P++ P YI G+SYGG + + + AG I N
Sbjct: 632 NNIFPQYKQNPFYITGESYGGVYIPTLSKLLLQMLSAGEININ 674
Score = 51.2 bits (117), Expect = 5e-07
Identities = 43/162 (26%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Frame = +1
Query: 106 GYVTVREGA--HMFWWLFYT-TAPVEKYTERPLIVWLQXXXXXXXXXXXNFEILGPLD-- 270
GY+T E H+F+W + PV P+++WL F LGP
Sbjct: 1044 GYLTADETPLNHLFYWFVESQNDPVND----PVVLWLNGGPGCSSLGGF-FTELGPFHPN 1098
Query: 271 ----LSLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYN 438
+L E SW K NV+F++ P GFSY ++ +D A + ++ F+
Sbjct: 1099 DDGGQTLYENVFSWNKKANVIFLEAPAKVGFSYTED-PNYYWDDDTTAQNNGYAIKSFFQ 1157
Query: 439 RR-PEFNDVPLYIYGQSYGGKMAIDMGLRMHEAEKAGTIRSN 561
++ P++ +I G+SYGG + L + + AG + N
Sbjct: 1158 KKFPQYAQNQFFITGESYGGVYCPTLTLNLVQQIDAGILNLN 1199
Score = 37.9 bits (84), Expect = 0.005
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +1
Query: 274 SLQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEIALDFVELMRGFYNRRPEF 453
++ E +W K N+L +D P G GFS+ N+ Q + + + + FY P
Sbjct: 111 TVYENVFAWNKVSNLLAIDGP-GAGFSWQQNLFQ---DDSYVTGALLNALMDFYTVYPNM 166
Query: 454 NDVPLYIYGQSYGGKMA 504
+ LYI G+ YG A
Sbjct: 167 LNSDLYIAGEGYGSFFA 183
>Z49127-6|CAA88947.1| 454|Caenorhabditis elegans Hypothetical
protein F13D12.6 protein.
Length = 454
Score = 52.8 bits (121), Expect = 2e-07
Identities = 39/163 (23%), Positives = 71/163 (43%), Gaps = 6/163 (3%)
Frame = +1
Query: 25 MSLLYFFLAVLFSKSVSGQFGPFEQDFGYVTVREGAHMFWWLFYTTAPVEKYTERPLIVW 204
+ Y + L + F+Q GY V + ++ + T+ P+++W
Sbjct: 13 LGFAYVCESALITNLPGAPISNFKQYSGYYNVGTKKNHMLHYWFVESQSNPSTD-PVLLW 71
Query: 205 LQXXXXXXXXXXXNFEILGPLDLS-----LQERNHSWVKNFNVLFVDNPVGTGFSYV-DN 366
L E GP +++ L+ +SW KN ++L ++ P G G+SY DN
Sbjct: 72 LTGGPGCSGLSALLTE-WGPWNVNTDGATLRTNPYSWNKNASILTLEAPAGVGYSYATDN 130
Query: 367 VMQLTKTNDEIALDFVELMRGFYNRRPEFNDVPLYIYGQSYGG 495
+ +D+ A + E + F+N P++ Y+ G+SYGG
Sbjct: 131 --NIATGDDQTASENWEALVAFFNEFPQYKGNDFYVTGESYGG 171
>U20864-3|AAC46662.1| 574|Caenorhabditis elegans Hypothetical
protein F32A5.3 protein.
Length = 574
Score = 52.8 bits (121), Expect = 2e-07
Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Frame = +1
Query: 91 FEQDFGYVTVREGAHMFWWLFYTTAPVEKYTER-PLIVWLQXXXXXXXXXXXNFEILGPL 267
F+ GYV A+ W + Y + PL+VW FE LGP
Sbjct: 36 FKSYSGYVDAN--ANGTWKMHYMLTESRSNPDTDPLLVWFNGGPGCSSLGGL-FEELGPF 92
Query: 268 DLS-----LQERNHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTN-DEIALDFVELMRG 429
++ L E ++W NVL++++P+G G+SY + N D+ A + +
Sbjct: 93 YVNFDGQTLYENPYAWNAKANVLYLESPIGVGYSYDTTTPGYFQANDDQSAAQNYQALTN 152
Query: 430 FYN-RRPEFNDVPLYIYGQSYGG 495
F+N +P++ + Y+ G+SY G
Sbjct: 153 FFNVAQPKYTNRTFYLSGESYAG 175
>AF038606-6|AAB92023.2| 464|Caenorhabditis elegans Hypothetical
protein C04C3.2 protein.
Length = 464
Score = 28.7 bits (61), Expect = 3.0
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 181 YISLLELLCRITTKTCELLLLPSHSRSLVQTDRIDLTHFY 62
YI L+ LLC I +L S SRS +QT ++ H+Y
Sbjct: 314 YIMLVILLCAIGVAVSMAML--SMSRSCIQTSKMPPPHYY 351
>Z81454-4|CAD89725.1| 483|Caenorhabditis elegans Hypothetical
protein B0391.6 protein.
Length = 483
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 501 HFTTVRLTV--NVERNIVELRTSIVESTH 421
HFT+V L + RN++++R ++ES H
Sbjct: 395 HFTSVNLEIWNGSRRNVIDIRNILIESPH 423
>U28735-10|AAM69112.1| 2427|Caenorhabditis elegans Hypothetical
protein F48E3.8a protein.
Length = 2427
Score = 28.3 bits (60), Expect = 4.0
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = -1
Query: 364 CQHN*SQCLPDYQ--RTKH*NSSPNCDFSLVKTSRVD----LKFRSFQFLWRSPQGLL 209
C +QC +Y RT + N + C ++V + + +K S+QFL+ SP GLL
Sbjct: 827 CAERNAQCQENYCTCRTGYTNINGQCAANIVTPAEPETLSQVKCMSYQFLFLSPSGLL 884
>AL031632-5|CAE11314.1| 324|Caenorhabditis elegans Hypothetical
protein Y32B12B.7 protein.
Length = 324
Score = 28.3 bits (60), Expect = 4.0
Identities = 12/32 (37%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 YVTVREGAHMFWWLFYTTAPV-EKYTERPLIV 201
Y+++ AH+ W FY T P+ +K R L+V
Sbjct: 286 YISLDAQAHVITWYFYCTHPIFKKKVARKLVV 317
>AC084159-11|ABO16465.1| 449|Caenorhabditis elegans F-box a protein
protein 221 protein.
Length = 449
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/29 (37%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = -2
Query: 501 HFTTVRLTV--NVERNIVELRTSIVESTH 421
HFT+V L + RN++++R ++ES H
Sbjct: 361 HFTSVNLEIWNGSRRNVIDIRNILIESPH 389
>U50300-8|AAC48105.1| 646|Caenorhabditis elegans Hypothetical
protein R03H4.6 protein.
Length = 646
Score = 27.9 bits (59), Expect = 5.3
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = +1
Query: 289 NHSWVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDEI 399
+H +V+N L D G+ SYVDN + LTK E+
Sbjct: 596 SHVFVENDKYLTFDR--GSMLSYVDNTIHLTKVGVEL 630
>AY157938-1|AAN35200.1| 1751|Caenorhabditis elegans ANC-1 protein.
Length = 1751
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 298 WVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDE 396
W+K + L +NP SY+ N + LT ND+
Sbjct: 549 WIKEYTQLNAENPQAKCASYI-NKITLTMANDQ 580
>AC006834-1|AAF40010.3| 8545|Caenorhabditis elegans Abnormal nuclear
anchorage protein1 protein.
Length = 8545
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 298 WVKNFNVLFVDNPVGTGFSYVDNVMQLTKTNDE 396
W+K + L +NP SY+ N + LT ND+
Sbjct: 549 WIKEYTQLNAENPQAKCASYI-NKITLTMANDQ 580
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,124,255
Number of Sequences: 27780
Number of extensions: 271954
Number of successful extensions: 600
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 561
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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