Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15k08r
         (912 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000448-1|AAH00448.1|  353|Homo sapiens THUMP domain containing...   152   2e-36
AK000281-1|BAA91050.1|  353|Homo sapiens protein ( Homo sapiens ...   151   3e-36
AC004381-1|AAC31666.1|  242|Homo sapiens Unknown gene product pr...   144   5e-34

>BC000448-1|AAH00448.1|  353|Homo sapiens THUMP domain containing 1
           protein.
          Length = 353

 Score =  152 bits (368), Expect = 2e-36
 Identities = 91/277 (32%), Positives = 153/277 (55%), Gaps = 9/277 (3%)
 Frame = -2

Query: 911 PASRASFARVTLEKKTASKEVYNLLNEYASKLY-PD--LDVEQVPPSAVPXXXXXXXXXX 741
           P  +       + ++   +E Y+LLNEY   +Y P+   D +Q P  +            
Sbjct: 41  PGLQGILITCNMNERKCVEEAYSLLNEYGDDMYGPEKFTDKDQQPSGSEGEDDDAEAA-- 98

Query: 740 XXXXXXXDIGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTAI 561
                       L++EV  IK +++  +R +RFQ VE+GA+N +F++T    PE+L   I
Sbjct: 99  ------------LKKEVGDIKASTE--MRLRRFQSVESGANNVVFIRTLGIEPEKLVHHI 144

Query: 560 IKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPT--SFSVVFNKR 387
           ++D+  T+ +KTR ++R+LPI  TCKA L D+ + A    + +F K P   +F +V+  R
Sbjct: 145 LQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF-KAPNKGTFQIVYKSR 203

Query: 386 FNNSVSRDLIIKELAELVVVKNRENKADLKNPGLCIIVEVIKGMCLLSIVDNYFTYKKYN 207
            N+ V+R+ +I+ELA +V   N ENK DL NP   ++VE+IK +C LS+V +Y  ++KYN
Sbjct: 204 NNSHVNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYN 263

Query: 206 LNEICKEESN----DSEESQAKKFKSSLNCETEEQNT 108
           L E+ K   +    +S++   K+ K     ++++ NT
Sbjct: 264 LQEVVKSPKDPSQLNSKQGNGKEAKLESADKSDQNNT 300


>AK000281-1|BAA91050.1|  353|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20274 fis, clone HEP02123. ).
          Length = 353

 Score =  151 bits (366), Expect = 3e-36
 Identities = 89/274 (32%), Positives = 150/274 (54%), Gaps = 5/274 (1%)
 Frame = -2

Query: 911 PASRASFARVTLEKKTASKEVYNLLNEYASKLY-PD--LDVEQVPPSAVPXXXXXXXXXX 741
           P  +       + ++   +E Y+LLNEY   +Y P+   D +Q P  +            
Sbjct: 41  PGLQGILITCNMNERKCVEEAYSLLNEYGDDMYGPEKFTDKDQRPSGSEGEDDDAEAA-- 98

Query: 740 XXXXXXXDIGDILRREVDSIKKNSQKSLRFKRFQVVETGASNCIFVKTNLPSPEELTTAI 561
                       L++EV  IK +++  +R +RFQ VE+GA+N +F++T    PE+L   I
Sbjct: 99  ------------LKKEVGDIKASTE--MRLRRFQSVESGANNVVFIRTLGIEPEKLVHHI 144

Query: 560 IKDLIATRIQKTRHVMRLLPIMITCKANLPDIMESAGKLFDKYFLKEPT--SFSVVFNKR 387
           ++D+  T+ +KTR ++R+LPI  TCKA L D+ + A    + +F K P   +F +V+  R
Sbjct: 145 LQDMYKTKKKKTRVILRMLPISGTCKAFLEDMKKYAETFLEPWF-KAPNKGTFQIVYKSR 203

Query: 386 FNNSVSRDLIIKELAELVVVKNRENKADLKNPGLCIIVEVIKGMCLLSIVDNYFTYKKYN 207
            N+ V+R+ +I+ELA +V   N ENK DL NP   ++VE+IK +C LS+V +Y  ++KYN
Sbjct: 204 NNSHVNREEVIRELAGIVCTLNSENKVDLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYN 263

Query: 206 LNEICKEESNDSEESQAKKFKSSLNCETEEQNTQ 105
           L E+ K   + S+ +  +        E+ +++ Q
Sbjct: 264 LQEVVKSPKDPSQLNSKQGNGEEAKLESADKSDQ 297


>AC004381-1|AAC31666.1|  242|Homo sapiens Unknown gene product
           protein.
          Length = 242

 Score =  144 bits (348), Expect = 5e-34
 Identities = 73/190 (38%), Positives = 120/190 (63%), Gaps = 6/190 (3%)
 Frame = -2

Query: 659 LRFKRFQVVETGASNCIFVKTNLPSPEELTTAIIKDLIATRIQKTRHVMRLLPIMITCKA 480
           +R +RFQ VE+GA+N +F++T    PE+L   I++D+  T+ +KTR ++R+LPI  TCKA
Sbjct: 1   MRLRRFQSVESGANNVVFIRTLGIEPEKLVHHILQDMYKTKKKKTRVILRMLPISGTCKA 60

Query: 479 NLPDIMESAGKLFDKYFLKEPT--SFSVVFNKRFNNSVSRDLIIKELAELVVVKNRENKA 306
            L D+ + A    + +F K P   +F +V+  R N+ V+R+ +I+ELA +V   N ENK 
Sbjct: 61  FLEDMKKYAETFLEPWF-KAPNKGTFQIVYKSRNNSHVNREEVIRELAGIVCTLNSENKV 119

Query: 305 DLKNPGLCIIVEVIKGMCLLSIVDNYFTYKKYNLNEICKEESN----DSEESQAKKFKSS 138
           DL NP   ++VE+IK +C LS+V +Y  ++KYNL E+ K   +    +S++   K+ K  
Sbjct: 120 DLTNPQYTVVVEIIKAVCCLSVVKDYMLFRKYNLQEVVKSPKDPSQLNSKQGNGKEAKLE 179

Query: 137 LNCETEEQNT 108
              ++++ NT
Sbjct: 180 SADKSDQNNT 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,350,933
Number of Sequences: 237096
Number of extensions: 2229335
Number of successful extensions: 3728
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3725
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)