Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15k01f
(592 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces p... 188 5e-49
SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces pom... 166 2e-42
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos... 28 0.89
SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr 1|... 26 3.6
SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subuni... 26 4.7
SPAC19D5.06c |din1||Dhp1p-interacting protein Din1|Schizosacchar... 25 6.2
SPBC23G7.10c |||NADH-dependent flavin oxidoreductase |Schizosacc... 25 8.3
SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 25 8.3
SPAC1399.05c |||transcription factor, zf-fungal binuclear cluste... 25 8.3
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 25 8.3
SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr 3|... 25 8.3
>SPAC23C11.05 |||inorganic pyrophosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 289
Score = 188 bits (458), Expect = 5e-49
Identities = 85/146 (58%), Positives = 106/146 (72%)
Frame = +1
Query: 154 YIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISL 333
Y E G+ T DY+V+ + G PIS HDIPL+A+ + ++NMVVE+PRWT AK+EI+
Sbjct: 4 YTTREVGALNTLDYQVYVEKNGTPISSWHDIPLYANAEKTILNMVVEIPRWTQAKLEITK 63
Query: 334 GEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDNDPVDV 513
LNPIKQD KKG LRFV N FPH GYIWNYGA PQT+E+PN V P+T A+GD+DP+DV
Sbjct: 64 EATLNPIKQDTKKGKLRFVRNCFPHHGYIWNYGAFPQTYEDPNVVHPETKAKGDSDPLDV 123
Query: 514 IEIGERVASRGDVYPVKILGTLALID 591
EIGE G V VK+LG +AL+D
Sbjct: 124 CEIGEARGYTGQVKQVKVLGVMALLD 149
>SPAC3A12.02 |||inorganic pyrophosphatase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 166 bits (404), Expect = 2e-42
Identities = 79/155 (50%), Positives = 100/155 (64%)
Frame = +1
Query: 127 ATLKTQVRMYIVEERGSPYTPDYRVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRW 306
A+L + + + G TPD+RV+ PIS HD+PL +DK NMV E+PRW
Sbjct: 2 ASLAKNILQFRSKITGKLNTPDFRVYCYKNNKPISFFHDVPLTSDKDT--FNMVTEIPRW 59
Query: 307 TNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGA 486
T AK EISL +PIKQD+K G LR+V N FP+ G+IWNYGALPQTWE+PN +D T
Sbjct: 60 TQAKCEISLTSPFHPIKQDLKNGKLRYVANSFPYHGFIWNYGALPQTWEDPNVIDSRTKM 119
Query: 487 RGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 591
+GD DP+DV EIG + G + VK+LG L LID
Sbjct: 120 KGDGDPLDVCEIGGSIGYIGQIKQVKVLGALGLID 154
>SPAC15A10.13 |ppk3||serine/threonine protein kinase
Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 637
Score = 28.3 bits (60), Expect = 0.89
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +1
Query: 49 PVCRSIARRLCAVKEPTRVTCSINSTATLKTQVRMYIVEERGSPYTPD 192
P +A R C + R C I +T K+ +YI E P T +
Sbjct: 59 PEWAELADRACETMKTLRHPCIIKYLSTYKSSTHLYIATETVRPVTTE 106
>SPAC1D4.10 |||tRNA endonuclease|Schizosaccharomyces pombe|chr
1|||Manual
Length = 809
Score = 26.2 bits (55), Expect = 3.6
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 169 RGSPYTPDY--RVFFKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEA 342
RG P T + V+ K+ GP P + + ++++V+E +WTNA + + +
Sbjct: 301 RGEPVTLENGKTVYPKEVIGPSIPGSSFFIIHCPNELVIDLVIENHKWTNAPKPVCVIHS 360
Query: 343 LNP 351
+ P
Sbjct: 361 VTP 363
>SPAC959.09c |apc5|SPAP32A8.01c|anaphase-promoting complex subunit
Apc5 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 737
Score = 25.8 bits (54), Expect = 4.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 111 TSYTCRFFNSAQSSCYRPANRNSC 40
TSY C+F NS S Y+ + N C
Sbjct: 254 TSYYCKFLNSWFSGDYQQSVENLC 277
>SPAC19D5.06c |din1||Dhp1p-interacting protein
Din1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +1
Query: 205 FKDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKK 372
F+D+ G + M + L+ + +++ + WT ++ + L AL IKQ VK+
Sbjct: 276 FRDDNGILIEMKE--LFTHQIPKMLRPYFKPNDWTPNRLLVVLEHALEWIKQTVKQ 329
>SPBC23G7.10c |||NADH-dependent flavin oxidoreductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 395
Score = 25.0 bits (52), Expect = 8.3
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +1
Query: 220 GPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEA 342
G ISP +D LW + + + +VE N K+ I L A
Sbjct: 94 GRISP-NDSGLWMESQMKPLRRIVEFAHSQNQKIGIQLAHA 133
>SPCC1494.09c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 157
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 398 TLFTNRRLPFFTSCLIGLRASPR-LISIFALV 306
T FT R + FF ++G ASP +F+L+
Sbjct: 67 TNFTLRGIDFFVDTIVGFPASPETTFKVFSLL 98
>SPAC1399.05c |||transcription factor, zf-fungal binuclear cluster
type|Schizosaccharomyces pombe|chr 1|||Manual
Length = 529
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 395 LFTNRRLPFFTSCLIGLRASPRL 327
L+T L T+CLI LR +P L
Sbjct: 157 LYTKSHLMLATACLIALRHNPSL 179
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 25.0 bits (52), Expect = 8.3
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +1
Query: 208 KDEGGPISPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRF 387
+DEG + +H + D AQ +VN E +++ +AL P K L+
Sbjct: 177 QDEGFIVISIHPGAVRTDSAQEIVNQHAEK---KPEILDLFAKQALTPEKS--ASDMLKV 231
Query: 388 VNNVFP-HRGYIWNY 429
V+N+ P + G +NY
Sbjct: 232 VDNLKPENNGLFYNY 246
>SPCC794.12c |mae2||malic enzyme|Schizosaccharomyces pombe|chr
3|||Manual
Length = 565
Score = 25.0 bits (52), Expect = 8.3
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +1
Query: 292 EVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNN 396
++ +W++ K I+ G L P+ ++ KK + NN
Sbjct: 430 QIDKWSDGKALIATGSPLPPLNRNGKKYVISQCNN 464
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,330,937
Number of Sequences: 5004
Number of extensions: 48682
Number of successful extensions: 119
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 118
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 256184654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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