Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15j08f
         (642 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457189-1|CAG33470.1|   85|Homo sapiens BM-002 protein.               40   0.006
BC005193-1|AAH05193.1|   85|Homo sapiens ubiquitin-fold modifier...    40   0.006
AL356863-1|CAH70411.1|   85|Homo sapiens ubiquitin-fold modifier...    40   0.006
AB154404-1|BAD15373.1|   85|Homo sapiens Ubiquitin-fold modifier...    40   0.006
AL356863-2|CAH70412.1|   80|Homo sapiens ubiquitin-fold modifier...    38   0.023
Z70222-1|CAA94181.1|   80|Homo sapiens ORF protein.                    38   0.040
AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 prot...    30   8.0  
AB023155-1|BAA76782.2| 1257|Homo sapiens KIAA0938 protein protein.     30   8.0  

>CR457189-1|CAG33470.1|   85|Homo sapiens BM-002 protein.
          Length = 85

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 111 MSKVTFKITLTSDPKLPFKV 170
           MSKV+FKITLTSDP+LP+KV
Sbjct: 1   MSKVSFKITLTSDPRLPYKV 20


>BC005193-1|AAH05193.1|   85|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 111 MSKVTFKITLTSDPKLPFKV 170
           MSKV+FKITLTSDP+LP+KV
Sbjct: 1   MSKVSFKITLTSDPRLPYKV 20


>AL356863-1|CAH70411.1|   85|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 111 MSKVTFKITLTSDPKLPFKV 170
           MSKV+FKITLTSDP+LP+KV
Sbjct: 1   MSKVSFKITLTSDPRLPYKV 20


>AB154404-1|BAD15373.1|   85|Homo sapiens Ubiquitin-fold modifier 1
           protein.
          Length = 85

 Score = 40.3 bits (90), Expect = 0.006
 Identities = 17/20 (85%), Positives = 20/20 (100%)
 Frame = +3

Query: 111 MSKVTFKITLTSDPKLPFKV 170
           MSKV+FKITLTSDP+LP+KV
Sbjct: 1   MSKVSFKITLTSDPRLPYKV 20


>AL356863-2|CAH70412.1|   80|Homo sapiens ubiquitin-fold modifier 1
           protein.
          Length = 80

 Score = 38.3 bits (85), Expect = 0.023
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +3

Query: 114 SKVTFKITLTSDPKLPFKV 170
           SKV+FKITLTSDP+LP+KV
Sbjct: 2   SKVSFKITLTSDPRLPYKV 20


>Z70222-1|CAA94181.1|   80|Homo sapiens ORF protein.
          Length = 80

 Score = 37.5 bits (83), Expect = 0.040
 Identities = 16/20 (80%), Positives = 19/20 (95%)
 Frame = +3

Query: 111 MSKVTFKITLTSDPKLPFKV 170
           MSKV+FKITLT DP+LP+KV
Sbjct: 1   MSKVSFKITLTWDPRLPYKV 20


>AF397731-1|AAM73757.1| 2282|Homo sapiens neuron navigator 3 protein.
          Length = 2282

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 27/116 (23%), Positives = 52/116 (44%)
 Frame = +1

Query: 280  ENWPNNTTTDIELRNAFKIAQHIEKCLEKLQKRNLLNEFLSTLYNYDDKSCYFLKNCFAD 459
            +NW N+  +  ELR++FK A   +K  +     + + E   +      K  +   +C + 
Sbjct: 1618 KNWVNSRGS--ELRSSFKQAFGKKKSTKPPSSHSDIEELTDSSLPASPKLPHNAGDCGSA 1675

Query: 460  STKAVLKKIIVSDCSINQIDISLNIYIEIFDEDKLVECLSDIMLETASKRTLLDNL 627
            S K       + +C+  + +I L +  E+ +++     L+DI LE  S    LD +
Sbjct: 1676 SMKPSQSASAICECTEAEAEIILQLKSELREKELK---LTDIRLEALSSAHHLDQI 1728


>AB023155-1|BAA76782.2| 1257|Homo sapiens KIAA0938 protein protein.
          Length = 1257

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 27/116 (23%), Positives = 52/116 (44%)
 Frame = +1

Query: 280 ENWPNNTTTDIELRNAFKIAQHIEKCLEKLQKRNLLNEFLSTLYNYDDKSCYFLKNCFAD 459
           +NW N+  +  ELR++FK A   +K  +     + + E   +      K  +   +C + 
Sbjct: 593 KNWVNSRGS--ELRSSFKQAFGKKKSTKPPSSHSDIEELTDSSLPASPKLPHNAGDCGSA 650

Query: 460 STKAVLKKIIVSDCSINQIDISLNIYIEIFDEDKLVECLSDIMLETASKRTLLDNL 627
           S K       + +C+  + +I L +  E+ +++     L+DI LE  S    LD +
Sbjct: 651 SMKPSQSASAICECTEAEAEIILQLKSELREKELK---LTDIRLEALSSAHHLDQI 703


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,897,689
Number of Sequences: 237096
Number of extensions: 1430314
Number of successful extensions: 2567
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2567
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7085195460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)