Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15j07f
         (396 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    25   0.31 
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    25   0.42 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         22   2.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   2.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    22   2.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    22   2.2  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    21   5.1  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   5.1  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    21   6.8  

>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 25.0 bits (52), Expect = 0.31
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 276 NAVFGKRGNGIYGLRTGSSWPF*KYDIC 359
           N V  K+G G   LR    W F KY+ C
Sbjct: 97  NVVTNKKGKGGPLLRPYPDWSFAKYEDC 124


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 24.6 bits (51), Expect = 0.42
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 276 NAVFGKRGNGIYGLRTGSSWPF*KYDIC 359
           N V  K GNG   L+    W F KY+ C
Sbjct: 96  NVVSDKTGNGGRLLQPYPDWSFAKYEDC 123


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 276 NAVFGKRGNGIYGLRTGSSWPF*KYDIC 359
           N +  K G+G   L+    W F KYD C
Sbjct: 91  NVISKKVGDGGPLLQPYPDWSFAKYDDC 118


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 160 RL*EQVLTLQPGWGFLPPLG*KSP 89
           R+    + LQPG  F  PLG + P
Sbjct: 458 RMDRDAVYLQPGMSFGEPLGLRRP 481


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 276 NAVFGKRGNGIYGLRTGSSWPF*KYDIC 359
           N +  K G+G   L+    W F KYD C
Sbjct: 91  NVISKKVGDGGPLLQPYPDWSFAKYDDC 118


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.2 bits (45), Expect = 2.2
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +3

Query: 276 NAVFGKRGNGIYGLRTGSSWPF*KYDIC 359
           N +  K G+G   L+    W F KYD C
Sbjct: 91  NVISKKVGDGGPLLQPYPDWSFAKYDDC 118


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -2

Query: 149 AGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISS 24
           AGT+S T+          + + +A+    +T+VGV  + ++S
Sbjct: 788 AGTSSITKYTGCELTSESMPLQSALTAAVQTSVGVTEISLAS 829


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
            receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 5.1
 Identities = 11/42 (26%), Positives = 22/42 (52%)
 Frame = -2

Query: 149  AGTNSATRLGVSATVGVKVTMSNAVKNTEKTTVGVDCLHISS 24
            AGT+S T+          + + +A+    +T+VGV  + ++S
Sbjct: 878  AGTSSITKYTGCELTSESMPLQSALTAAVQTSVGVTEISLAS 919


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 6/8 (75%), Positives = 8/8 (100%)
 Frame = +2

Query: 95  LLPQRWQK 118
           +LP+RWQK
Sbjct: 324 MLPERWQK 331


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.6 bits (41), Expect = 6.8
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = +3

Query: 276 NAVFGKRGNGIYGLRTGSSWPF*KYDIC 359
           N + GK G G   L+    W F ++  C
Sbjct: 92  NVISGKTGKGGRLLKPYPDWSFAEFKDC 119


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,879
Number of Sequences: 438
Number of extensions: 2270
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used:  9761793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)