Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15i24f
         (486 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chlor...    22   3.0  
DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chlor...    22   3.0  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.3  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   5.3  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.0  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       21   9.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   9.2  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   9.2  

>DQ667186-1|ABG75738.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 437 RYTLRRLFTKYC 402
           R+TL + FT YC
Sbjct: 208 RFTLEKFFTDYC 219


>DQ667185-1|ABG75737.1|  447|Apis mellifera glutamate-gated chloride
           channel protein.
          Length = 447

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -2

Query: 437 RYTLRRLFTKYC 402
           R+TL + FT YC
Sbjct: 208 RFTLEKFFTDYC 219


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 77  LSASAVAVNGQATIFGRELA 136
           +S S +AVNG  T+F   L+
Sbjct: 261 MSLSPIAVNGYRTLFFHPLS 280


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +2

Query: 44  TTFSIDLALPKLSASAVA 97
           T +++DL+LP+L ++ +A
Sbjct: 515 TQYNLDLSLPQLDSTELA 532


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 7.0
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 11  VNDVTFNLLRPTTFSIDLALPKLSASA 91
           +N+   NL+RP TF+  + L ++   A
Sbjct: 624 INNNYINLVRPNTFTDKVNLTRVDMYA 650


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/23 (30%), Positives = 13/23 (56%)
 Frame = -3

Query: 298 GYVVAEENNFESGLNIANSKNGT 230
           G+++   NN +  +   NS +GT
Sbjct: 32  GFIIQNNNNDDWSVGKKNSNSGT 54


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 417 VYKILLMMKRIIRSTISLIC 358
           +YK L +++ +I S   LIC
Sbjct: 321 LYKYLQLIENVIPSNEELIC 340


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -1

Query: 417 VYKILLMMKRIIRSTISLIC 358
           +YK L +++ +I S   LIC
Sbjct: 336 LYKYLQLIENVIPSNEELIC 355


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,232
Number of Sequences: 438
Number of extensions: 2197
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)