BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15i14f
(382 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein pr... 44 1e-04
BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha f... 44 1e-04
BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha f... 44 1e-04
BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-indu... 44 1e-04
BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein. 44 1e-04
AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane... 44 1e-04
DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing pro... 33 0.31
CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein. 33 0.31
BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for IM... 33 0.31
BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open read... 33 0.31
AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I... 33 0.31
D83017-1|BAA11680.1| 810|Homo sapiens nel-related protein protein. 29 5.0
BC096103-1|AAH96103.1| 763|Homo sapiens NELL1 protein protein. 29 5.0
BC096102-1|AAH96102.1| 810|Homo sapiens NEL-like 1 (chicken) pr... 29 5.0
BC096101-1|AAH96101.1| 810|Homo sapiens NEL-like 1 (chicken) pr... 29 5.0
BC096100-1|AAH96100.1| 763|Homo sapiens NELL1 protein protein. 29 5.0
BC069674-1|AAH69674.1| 810|Homo sapiens nel-like 1, precursor p... 29 5.0
>BX537543-1|CAD97778.1| 161|Homo sapiens hypothetical protein
protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC101969-1|AAI01970.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC101402-1|AAI01403.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC101401-1|AAI01402.1| 161|Homo sapiens LPS-induced TNF-alpha
factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC096066-1|AAH96066.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC096065-1|AAH96065.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC096063-1|AAH96063.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC046154-1|AAH46154.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC039840-1|AAH39840.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC016491-1|AAH16491.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC008309-1|AAH08309.1| 161|Homo sapiens lipopolysaccharide-induced
TNF factor protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>BC000053-1|AAH00053.1| 161|Homo sapiens LITAF protein protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>AB034747-1|BAB32547.1| 161|Homo sapiens small integral membrane
protein of lysosome/late endosome protein.
Length = 161
Score = 44.4 bits (100), Expect = 1e-04
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHI-IAILLXXXXXXXXXXXXXXMNSCNNANHYCPN 287
P+ M CPSCN I +++ A T + L +++ + +HYCPN
Sbjct: 91 PIQMCCPSCNKMIVSQLSYNAGALTWLSCGSLCLLGCIAGCCFIPFCVDALQDVDHYCPN 150
Query: 288 CSAFLGTYIR 317
C A LGTY R
Sbjct: 151 CRALLGTYKR 160
>DQ167023-1|AAZ94626.1| 208|Homo sapiens cell death inducing
protein protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHIIAILLXXXXXXXXXXXXXXM-NSCNNANHYCPN 287
PV VCP C I T+I + ++ + N + H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 288 CSAFLGTYIR 317
C A++ TY R
Sbjct: 197 CKAYIYTYKR 206
>CR533446-1|CAG38477.1| 208|Homo sapiens C16orf5 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHIIAILLXXXXXXXXXXXXXXM-NSCNNANHYCPN 287
PV VCP C I T+I + ++ + N + H CP+
Sbjct: 137 PVQTVCPHCQQAIATKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 288 CSAFLGTYIR 317
C A++ TY R
Sbjct: 197 CKAYIYTYKR 206
>BC007604-1|AAH07604.1| 125|Homo sapiens Unknown (protein for
IMAGE:3350242) protein.
Length = 125
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHIIAILLXXXXXXXXXXXXXXM-NSCNNANHYCPN 287
PV VCP C I T+I + ++ + N + H CP+
Sbjct: 54 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 113
Query: 288 CSAFLGTYIR 317
C A++ TY R
Sbjct: 114 CKAYIYTYKR 123
>BC002882-1|AAH02882.1| 208|Homo sapiens chromosome 16 open reading
frame 5 protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHIIAILLXXXXXXXXXXXXXXM-NSCNNANHYCPN 287
PV VCP C I T+I + ++ + N + H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 288 CSAFLGTYIR 317
C A++ TY R
Sbjct: 197 CKAYIYTYKR 206
>AF195661-1|AAG35583.1| 208|Homo sapiens transmembrane protein I1
protein.
Length = 208
Score = 33.1 bits (72), Expect = 0.31
Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +3
Query: 111 PVSMVCPSCNIDIQTRIERKATTRTHIIAILLXXXXXXXXXXXXXXM-NSCNNANHYCPN 287
PV VCP C I T+I + ++ + N + H CP+
Sbjct: 137 PVQTVCPHCQQAITTKISYEIGLMNFVLGFFCCFMGCDLGCCLIPCLINDFKDVTHTCPS 196
Query: 288 CSAFLGTYIR 317
C A++ TY R
Sbjct: 197 CKAYIYTYKR 206
>D83017-1|BAA11680.1| 810|Homo sapiens nel-related protein protein.
Length = 810
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 249 MNSCNNANHYCPNCSAFL 302
+ C N NH CP CS FL
Sbjct: 217 ITQCPNLNHTCPTCSDFL 234
>BC096103-1|AAH96103.1| 763|Homo sapiens NELL1 protein protein.
Length = 763
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 249 MNSCNNANHYCPNCSAFL 302
+ C N NH CP CS FL
Sbjct: 217 ITQCPNLNHTCPTCSDFL 234
>BC096102-1|AAH96102.1| 810|Homo sapiens NEL-like 1 (chicken)
protein.
Length = 810
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 249 MNSCNNANHYCPNCSAFL 302
+ C N NH CP CS FL
Sbjct: 217 ITQCPNLNHTCPTCSDFL 234
>BC096101-1|AAH96101.1| 810|Homo sapiens NEL-like 1 (chicken)
protein.
Length = 810
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 249 MNSCNNANHYCPNCSAFL 302
+ C N NH CP CS FL
Sbjct: 217 ITQCPNLNHTCPTCSDFL 234
>BC096100-1|AAH96100.1| 763|Homo sapiens NELL1 protein protein.
Length = 763
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 249 MNSCNNANHYCPNCSAFL 302
+ C N NH CP CS FL
Sbjct: 217 ITQCPNLNHTCPTCSDFL 234
>BC069674-1|AAH69674.1| 810|Homo sapiens nel-like 1, precursor
protein.
Length = 810
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 249 MNSCNNANHYCPNCSAFL 302
+ C N NH CP CS FL
Sbjct: 217 ITQCPNLNHTCPTCSDFL 234
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,841,575
Number of Sequences: 237096
Number of extensions: 991524
Number of successful extensions: 5592
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 5527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5573
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -