Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15i14f
         (382 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         20   8.5  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    20   8.5  
AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex det...    20   8.5  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    20   8.5  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    20   8.5  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    20   8.5  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    20   8.5  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    20   8.5  

>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 361 NCLYFNPTKSNVYYYL 314
           N LY++P  S   YY+
Sbjct: 263 NNLYYSPVASTSLYYV 278


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 166 RSILVWMSMLHDGQTME 116
           R +L W S  +DG  +E
Sbjct: 144 RCVLKWASWTYDGYQLE 160


>AY569721-1|AAS86674.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 252 NSCNNANHYCPN 287
           NSCN +N+Y  N
Sbjct: 309 NSCNYSNNYYNN 320


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 361 NCLYFNPTKSNVYYYL 314
           N LY++P  S+  YY+
Sbjct: 264 NNLYYSPLTSHSLYYV 279


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 361 NCLYFNPTKSNVYYYL 314
           N LY++P  S   YY+
Sbjct: 263 NNLYYSPVASTSLYYV 278


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 361 NCLYFNPTKSNVYYYL 314
           N LY++P  S   YY+
Sbjct: 264 NNLYYSPLSSRSLYYV 279


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 361 NCLYFNPTKSNVYYYL 314
           N LY++P  S   YY+
Sbjct: 263 NNLYYSPVASTSLYYV 278


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 361 NCLYFNPTKSNVYYYLM*VP 302
           N LY++P  S+  YY+   P
Sbjct: 261 NNLYYSPLASHGLYYVNTAP 280


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,868
Number of Sequences: 438
Number of extensions: 1945
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)