Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15i09f
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr... 30 1.5
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 30 1.5
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 30 1.5
Z68222-2|CAA92498.1| 105|Caenorhabditis elegans Hypothetical pr... 29 2.0
U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical pr... 28 4.7
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 28 6.2
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 27 8.2
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 27 8.2
>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 ENNIACDTLIGHSKFRYRSNTKLASYVRTVAPESCFANTSV-NVLS 282
E+NI+ D + S+ +Y+S+ KL++ RTV PE A ++ N++S
Sbjct: 1294 ESNISMDDVFNTSQ-KYKSDEKLSTPERTVEPEVSTATMNLDNIIS 1338
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 148 ENNIACDTLIGHSKFRYRSNTKLASYVRTVAPESCFANTSVN 273
E+NI+ D + S+ +Y+S+ KL+S RTV PE A +++
Sbjct: 1618 ESNISMDDVFNTSQ-KYKSDEKLSSPERTVEPEVSTATMNLD 1658
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 148 ENNIACDTLIGHSKFRYRSNTKLASYVRTVAPESCFANTSVN 273
E+NI+ D + S+ +Y+S+ KL++ RTV PE A +++
Sbjct: 1981 ESNISMDDVFNTSQ-KYKSDEKLSTPERTVEPEVSTATMNLD 2021
>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
T04F3.1 protein.
Length = 3517
Score = 29.9 bits (64), Expect = 1.5
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 148 ENNIACDTLIGHSKFRYRSNTKLASYVRTVAPESCFANTSV-NVLS 282
E+NI+ D + S+ +Y+S+ KL++ RTV PE A ++ N++S
Sbjct: 1294 ESNISMDDVFNTSQ-KYKSDEKLSTPERTVEPEVSTATMNLDNIIS 1338
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/42 (38%), Positives = 27/42 (64%)
Frame = +1
Query: 148 ENNIACDTLIGHSKFRYRSNTKLASYVRTVAPESCFANTSVN 273
E+NI+ D + S+ +Y+S+ KL+S RTV PE A +++
Sbjct: 1618 ESNISMDDVFNTSQ-KYKSDEKLSSPERTVEPEVSTATMNLD 1658
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/42 (35%), Positives = 27/42 (64%)
Frame = +1
Query: 148 ENNIACDTLIGHSKFRYRSNTKLASYVRTVAPESCFANTSVN 273
E+NI+ D + S+ +Y+S+ KL++ RTV PE A +++
Sbjct: 1981 ESNISMDDVFNTSQ-KYKSDEKLSTPERTVEPEVSTATMNLD 2021
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 291 TRFSPTAEIAYVAGLAVKRRPRRTRLLVPCWVTVRFLKGAFGAFENVFNEHG--AWIFLI 464
TR+ PT+E +Y GLA R T +++P + FG + ++F G +F+
Sbjct: 186 TRWFPTSERSYALGLATGGRQIGTLIIIPAAGALCSQTEIFGGWPSIFYLSGFIGVLFIF 245
Query: 465 RFAGHGTD 488
+ G D
Sbjct: 246 SYIFLGAD 253
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 29.9 bits (64), Expect = 1.5
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 291 TRFSPTAEIAYVAGLAVKRRPRRTRLLVPCWVTVRFLKGAFGAFENVFNEHG--AWIFLI 464
TR+ PT+E +Y GLA R T +++P + FG + ++F G +F+
Sbjct: 172 TRWFPTSERSYALGLATGGRQIGTLIIIPAAGALCSQTEIFGGWPSIFYLSGFIGVLFIF 231
Query: 465 RFAGHGTD 488
+ G D
Sbjct: 232 SYIFLGAD 239
>Z68222-2|CAA92498.1| 105|Caenorhabditis elegans Hypothetical
protein ZK1251.2 protein.
Length = 105
Score = 29.5 bits (63), Expect = 2.0
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 196 YRSNTKLASYVRTVAPESCFANTSVNVLSE 285
YR ++ SYV V ++C +NT VN+ S+
Sbjct: 59 YRCGRRIHSYVFAVCGKACESNTEVNIASK 88
>U64833-4|AAB04817.1| 380|Caenorhabditis elegans Hypothetical
protein B0507.7 protein.
Length = 380
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -2
Query: 290 INSLNTLTDVFAKQ--DSGATVRTYEASFVFERYRNFECPINVSHAILFSTSH 138
+N + L + AKQ D + + + + +Y+ FEC N+S + SH
Sbjct: 71 LNGIANLAKLRAKQSLDDQFNLFKQQCNILCSKYKLFECEFNISETLNIQESH 123
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = -3
Query: 514 TRPVKASVR-SVPWPANRIRKIHAPCSLNTFSNAPKAPFRNL 392
T+PV SV SVP P+N AP L ++ PFRN+
Sbjct: 150 TQPVNPSVSPSVP-PSNMPPTTTAPMKLGAVCDSSSTPFRNI 190
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 203 QIQSWLRTYVRWRRSPVSRIRP 268
QIQ W+RT R +R+P RP
Sbjct: 41 QIQEWMRTLRRVKRAPTRNNRP 62
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +2
Query: 203 QIQSWLRTYVRWRRSPVSRIRP 268
QIQ W+RT R +R+P RP
Sbjct: 41 QIQEWMRTLRRVKRAPTRNNRP 62
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,815,999
Number of Sequences: 27780
Number of extensions: 270521
Number of successful extensions: 589
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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