Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15g20f
(637 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 29 0.43
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.56
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 28 1.3
SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15 |Sc... 27 1.7
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 27 2.3
SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyce... 27 3.0
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 27 3.0
SPAC27F1.05c |||aminotransferase class-III, unknown specificty|S... 26 4.0
SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr 1... 26 4.0
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 26 4.0
SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pomb... 26 5.2
SPAC12B10.15c |||ribonuclease H2 complex subunit|Schizosaccharom... 26 5.2
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 25 6.9
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 25 6.9
SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces pomb... 25 6.9
SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces pombe... 25 6.9
SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredox... 25 9.1
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 25 9.1
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 29.5 bits (63), Expect = 0.43
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 254 YLPRAPRGPPAIGSTVLTSPHANANGPPERRQP 352
YLP++ PPA V + H N N RR P
Sbjct: 557 YLPKSSASPPANAPIVSSDVHKNENAGTARRAP 589
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 0.56
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 254 YLPRAPRGPPAIGSTVLTSPHANANGPPERRQPPVSPVTCAVRP 385
Y P AP+ P A S + +SP N PP P++ + V P
Sbjct: 957 YTPVAPQSPVAAASRISSSP----NMPPSNPYTPIAVASSTVNP 996
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 27.9 bits (59), Expect = 1.3
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = -1
Query: 520 VKI*DSLLVDSIVVSLEGQYSKTLLGVSSVMG 425
+KI D +D ++ L+G K+ LG +S++G
Sbjct: 83 IKITDQRGIDEFMIKLDGTNDKSKLGANSIVG 114
>SPCC1183.01 |sec15|SPCC1672.13|exocyst complex subunit Sec15
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 785
Score = 27.5 bits (58), Expect = 1.7
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 517 LHADAFLELRILIEVDLGDNDLAHLPKDIF-RGXERLRLVV 636
++AD+F+ELR + LGDN +L D F R RL+ V
Sbjct: 691 VNADSFIELRQCANLLLGDNMEEYLDTDKFMRDFNRLQPAV 731
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 27.1 bits (57), Expect = 2.3
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 376 RPPTLSSDIQVLDLHDNPLRSLPQEVFSNIGLLNLQRLNLRATSLRSL-HADAFLELRIL 552
+P T ++VL++ N + L +FS + +L+ LN+ L L H+ +L L
Sbjct: 470 KPITALRQLEVLNMSRNDIYELDPLIFSGLSRNSLKELNIANNKLFFLPHSTRYLV--NL 527
Query: 553 IEVDLGDNDLAHLP 594
+DL N+ P
Sbjct: 528 TYLDLSYNNFVTFP 541
>SPBC28E12.02 ||SPBC9B6.13|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 663
Score = 26.6 bits (56), Expect = 3.0
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 223 RAYSSHFEFTFTPADCH*RNSRFRS 149
+ Y+S+ EF+ TP DC+ N R+
Sbjct: 606 KLYNSYIEFSTTPFDCYGHNVLIRT 630
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 26.6 bits (56), Expect = 3.0
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 9 FGSPTGAIVTPAQSSPNAIVTRHTENEVM 95
FGSP+ AIV A+ A++ ++ NEV+
Sbjct: 1139 FGSPSKAIVGLARKGLTALLLENSSNEVL 1167
>SPAC27F1.05c |||aminotransferase class-III, unknown
specificty|Schizosaccharomyces pombe|chr 1|||Manual
Length = 484
Score = 26.2 bits (55), Expect = 4.0
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +3
Query: 63 IVTRHTENEVMWTCLCLC-DRYI*TYGIISDRNL 161
+VT N+ +W CL C D + G IS RNL
Sbjct: 100 VVTVGNNNQYVWDCLQKCFDAKLYMMGAISYRNL 133
>SPAC869.03c |||urea transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 661
Score = 26.2 bits (55), Expect = 4.0
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = -1
Query: 112 RHKHVHITSFSVCLVTIAFGLLWAGVTIA 26
R HV +T F+VC+ +A + G+TI+
Sbjct: 396 RVTHVFVTIFAVCMGALAVLFNYIGITIS 424
>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 420
Score = 26.2 bits (55), Expect = 4.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = +1
Query: 94 CG-RVCAYVIVIFERMELSPIGISSSFNGS--RPE*T*TRNEMS 216
CG VCA+ + + R+ SP+ SS +N S +P+ T R ++S
Sbjct: 167 CGAHVCAFTLELVRRLLHSPMPTSSMWNLSTFQPDVTAIREQLS 210
>SPAC3H5.09c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 2685
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -1
Query: 226 PRAYSSHFEFTFTPADCH*RNSRFRSEIIP 137
P A+S F + + CH RN + EIIP
Sbjct: 1691 PLAFSPRFTY-YRHTKCHRRNEKNEKEIIP 1719
>SPAC12B10.15c |||ribonuclease H2 complex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 147
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 444 PRSVFEYWPSKLTTIESTSNESQIFTRGRVL 536
P VFEY+ K+ +T +++ + RGR L
Sbjct: 33 PAPVFEYFHDKIQISNNTHSKTTVCLRGREL 63
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.4 bits (53), Expect = 6.9
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = +2
Query: 281 PAIGSTVLTSPHANANGPPERRQPPVSPVTCAVRP 385
PAI V +P A P + PP PV ++ P
Sbjct: 721 PAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISP 755
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.4 bits (53), Expect = 6.9
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +3
Query: 429 ITELTPRSVFEYWPSKLTTIESTSNE 506
+ L+P+S + YW S L T S S +
Sbjct: 163 LLSLSPKSTYSYWASVLNTKASFSKK 188
>SPBPB2B2.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 220
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -1
Query: 157 FRSEIIPYVQI*RSHRHKHVHITSFSVCLVTIAFGLL--WAGV 35
FRS + P VQ+ RHK I S ++ GLL W G+
Sbjct: 113 FRSVLQPEVQVSPEARHKLAEIDKGSHLEANVSGGLLKYWYGI 155
>SPBC32F12.09 |rum1||CDK inhibitor Rum1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 230
Score = 25.4 bits (53), Expect = 6.9
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
Frame = +1
Query: 376 RPPTLSSDIQVLDLHDNPLRSLPQEVFSNIGLL--NLQRLNLRATSLRS 516
+P L +D DNP S+ +S IG+L NL + + SL+S
Sbjct: 140 KPKLLFADSAPSSSSDNPTSSVDLNDYSQIGILPPNLNSIGNKMFSLKS 188
>SPAC22E12.10c |etp1|cox15|mitochondrial type I [2Fe-2S] ferredoxin
Etp1/ cytochrome oxidase cofactor Cox15,
fusion|Schizosaccharomyces pombe|chr 1|||Manual
Length = 631
Score = 25.0 bits (52), Expect = 9.1
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 593 GK*ARSLSPKSTSISILNSKNASACKDLRLVARRFNRCKFRRPIFENTSWGKLRNGLS 420
G+ + +S + S+LN N S K+L L N CKF + FE +L N ++
Sbjct: 28 GRSSWRMSRSFSGSSVLNEINLSRTKNLFL-----NDCKFNKNSFEKFFARRLSNSVA 80
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 563 STSISILNSKNASACKDLRLVARRFNRCKFRRPIFENT 450
+ S++ L SKN DL L+ + N+ F+NT
Sbjct: 742 NNSLAALESKNKKLENDLNLLTEKLNKKNADTESFKNT 779
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,760,269
Number of Sequences: 5004
Number of extensions: 59841
Number of successful extensions: 187
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 187
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 283719918
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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