Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15g07f
(607 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0858 + 23740589-23743233,23743362-23743503,23744778-237449... 31 0.94
02_01_0034 + 207750-207794,207956-207988,208007-208037,208409-20... 31 0.94
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411... 30 1.2
09_04_0583 - 18699265-18699459,18701579-18701827,18703283-187036... 30 1.6
02_01_0204 + 1375705-1375869,1376151-1376318 29 2.2
11_04_0158 + 14207463-14207629,14207724-14207774,14207874-142080... 29 2.9
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 29 2.9
01_01_0324 - 2613396-2613452,2613658-2613750,2614045-2614236,261... 29 2.9
04_04_0962 + 29728983-29729034,29729622-29731369,29731656-297317... 29 3.8
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 3.8
06_01_0944 + 7264833-7265120,7265511-7265600,7265702-7265798,726... 28 5.0
05_04_0388 - 20841566-20841667,20841861-20842031 28 5.0
05_04_0382 + 20796567-20796810,20796894-20797750 28 5.0
05_03_0478 - 14526180-14526578 28 5.0
04_01_0402 + 5276017-5276241,5276299-5276753,5277004-5277070,527... 28 5.0
01_05_0606 - 23607170-23607568,23607738-23607941,23608035-236081... 28 5.0
07_03_0493 + 18747427-18748356,18748594-18748697,18749586-187497... 28 6.6
05_05_0155 + 22787658-22787930,22788029-22788096,22789600-227899... 28 6.6
04_04_1377 - 33064906-33065607 28 6.6
04_04_1263 - 32207636-32207938,32208020-32208170,32208263-322085... 28 6.6
04_04_0613 + 26617677-26617963,26618726-26618786,26619598-266198... 28 6.6
02_05_0106 - 25877997-25878677,25878951-25879222,25879317-25879476 28 6.6
09_01_0121 - 1851777-1852039,1856499-1856703 27 8.7
08_01_0060 - 413088-413999 27 8.7
07_03_0276 + 16166528-16166796,16166824-16167291,16168048-161684... 27 8.7
03_04_0023 + 16537257-16537272,16537515-16537929,16538404-165384... 27 8.7
03_02_0050 + 5272471-5274861 27 8.7
02_01_0384 - 2781362-2782299,2782320-2782428 27 8.7
>12_02_0858 +
23740589-23743233,23743362-23743503,23744778-23744990,
23745083-23745190,23745378-23745587,23745881-23746055,
23746197-23746264
Length = 1186
Score = 30.7 bits (66), Expect = 0.94
Identities = 16/29 (55%), Positives = 17/29 (58%), Gaps = 2/29 (6%)
Frame = -1
Query: 268 PHQE--PGPGCGMRGSYLNSFSVFEPSSV 188
PHQE P PGCG S+ N S FE S V
Sbjct: 808 PHQESHPTPGCGTELSHKNDTSGFERSDV 836
>02_01_0034 +
207750-207794,207956-207988,208007-208037,208409-208505,
209238-209337
Length = 101
Score = 30.7 bits (66), Expect = 0.94
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -1
Query: 400 CLCCLWSISLVNSSTNCPPVAPKVW 326
CL LW I +V+ +CP + P W
Sbjct: 19 CLLTLWVIPIVDDDISCPDLMPPAW 43
>06_03_0867 +
25534760-25539620,25540662-25540857,25540957-25541104,
25541673-25541751,25542151-25542238,25542330-25542600,
25542676-25542718,25542801-25542904,25543374-25543790
Length = 2068
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -2
Query: 132 HHCHHEHNQPCAAEHAHYYDRFQL 61
HH HH H+ P +H H++ QL
Sbjct: 63 HHHHHHHHPPPRVQHHHHHHHQQL 86
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = -2
Query: 144 PRAQHHCHHEHNQ 106
PR QHH HH H Q
Sbjct: 73 PRVQHHHHHHHQQ 85
Score = 27.5 bits (58), Expect = 8.7
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = -2
Query: 144 PRAQHHCHHEHNQPCAAEHAHYY 76
P HH HH H P H H++
Sbjct: 60 PDHHHHHHHHHPPPRVQHHHHHH 82
>09_04_0583 -
18699265-18699459,18701579-18701827,18703283-18703669,
18703793-18703870,18704082-18704141,18704299-18704343,
18704506-18704718,18704867-18704932
Length = 430
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 204 LNPHPSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCAA 94
+ P P G + +V SP G A+ HH H+Q AA
Sbjct: 17 VEPSPKGEISLVLSPAAVGTKMARSPDHHHHHQQQAA 53
>02_01_0204 + 1375705-1375869,1376151-1376318
Length = 110
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 349 PPVAPKVWRFPRRHRCPRTWSTLAWTTPHQEPGP 248
PP P++ R R R P +ST WT PH+ P P
Sbjct: 14 PPRIPRLLRLRRPDRTPSAFST--WT-PHRRPRP 44
>11_04_0158 +
14207463-14207629,14207724-14207774,14207874-14208002,
14209342-14209447,14209491-14209601,14210042-14210098,
14210903-14211727
Length = 481
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Frame = -2
Query: 198 PHPSGGL---HVVYSPPDGGDPRAQHHCHHEHN--QPCAAEHAH 82
P P GG H+ + PP + QH H H+ QP AA H
Sbjct: 297 PFPGGGKDESHLFHLPPAAAAKQPQHMDEHHHHQQQPMAAPQQH 340
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 60 GVGNDHNSERVQLRMAGCVRDGSGAVREGRLHQAESRRHAGHRTDEG 200
G+G H + G D S R+ RL SRR A HR D+G
Sbjct: 58 GIGGSHGLHKSGTATTGLPFDISWR-RQDRLQIVVSRRRAAHRLDDG 103
>01_01_0324 -
2613396-2613452,2613658-2613750,2614045-2614236,
2614325-2614398,2615846-2616098,2616179-2616249,
2616878-2617042,2617440-2617469,2617867-2617947,
2618047-2618272
Length = 413
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 294 VRGQRWRRGKRQTFGATGGQFVEE 365
++G R RRGK + GA GGQ E
Sbjct: 1 MKGDRVRRGKEEALGAGGGQLCPE 24
>04_04_0962 +
29728983-29729034,29729622-29731369,29731656-29731742,
29732035-29732199,29732437-29732526,29732863-29733027,
29733124-29733418,29733550-29733764,29733879-29733947,
29734107-29734184,29734466-29734529,29734658-29734897,
29734985-29735124
Length = 1135
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/34 (35%), Positives = 24/34 (70%), Gaps = 1/34 (2%)
Frame = +1
Query: 46 SFNTME-LETIIIVSVFSCAWLVVFVMAVVLCAR 144
+F+ M+ L TI+I+S S L++F+ ++++C R
Sbjct: 734 TFSVMQFLGTILIISYVSWPVLIIFIPSILICIR 767
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = -2
Query: 150 GDPRAQHHCHHEHNQPCAAEHAHYYDR 70
G P Q H HH+ Q A H Y R
Sbjct: 25 GPPLQQQHNHHQQQQTSAPHHQQYVQR 51
>06_01_0944 +
7264833-7265120,7265511-7265600,7265702-7265798,
7265927-7265988,7266508-7266596,7266702-7266822,
7266915-7267058,7267492-7267820,7268154-7268394,
7269042-7269245,7271150-7271619,7272703-7272746,
7273121-7273211,7273494-7273596,7273682-7273783,
7274214-7274300,7274421-7274531
Length = 890
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = +1
Query: 280 RGYSMYVGSDGDVESARPSERRVGS 354
+GY MY G GD+ + RP++RR+ S
Sbjct: 516 QGYRMYYGG-GDLPTIRPNKRRLAS 539
>05_04_0388 - 20841566-20841667,20841861-20842031
Length = 90
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -2
Query: 345 PSLRRSGAFHVAIAAHVHGVPSPGQLLIRNQARVVEC 235
P LRRS F ++++ H +P PG L AR C
Sbjct: 12 PPLRRSRLFVISLSDHATPLPVPGSWLGATGARGTGC 48
>05_04_0382 + 20796567-20796810,20796894-20797750
Length = 366
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -2
Query: 192 PSGGLHVVYSPPDGGDPRAQHHCHH 118
PS H Y+PP QHH HH
Sbjct: 157 PSTSRHAGYAPPASHHHLLQHHLHH 181
>05_03_0478 - 14526180-14526578
Length = 132
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 105 AGCVRDGSGAVREGRLHQAESRRHAGHRTDEGSKTENEFR*EPR 236
+GCV G R R + + R+H G+R E+ R PR
Sbjct: 46 SGCVSSGGSWARRQRRDEEDHRQHDGYRGARRRGQEDHRRRRPR 89
>04_01_0402 +
5276017-5276241,5276299-5276753,5277004-5277070,
5277288-5277389
Length = 282
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = +1
Query: 262 DEELSRRGYSMYV--GSDGDVESARPSERRV 348
DE L +R ++++ G DGDVE A+P RV
Sbjct: 174 DESLLQRSNNIHIRLGVDGDVEVAKPEPTRV 204
>01_05_0606 -
23607170-23607568,23607738-23607941,23608035-23608113,
23608371-23608430,23608514-23608611,23608703-23608891,
23610670-23611368
Length = 575
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = -2
Query: 177 HVVYSPPDGGDPRAQHHCHHEHNQPCAAEHA 85
H V GGD R QHH HH+ + A+ A
Sbjct: 9 HGVRHGGGGGDARKQHHHHHQLSHGFGAKDA 39
>07_03_0493 +
18747427-18748356,18748594-18748697,18749586-18749795,
18749992-18750597,18750819-18751095,18751163-18751310,
18751957-18752044,18752167-18752284
Length = 826
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Frame = -2
Query: 186 GGLHVVYSPPDGGDPRA---QHHCHHEHNQPCA 97
G +++ PP PR QHH HH H+ A
Sbjct: 30 GFFNILVPPPQSPRPRCPDHQHHHHHHHHHDAA 62
>05_05_0155 +
22787658-22787930,22788029-22788096,22789600-22789915,
22790207-22790323
Length = 257
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -2
Query: 201 NPHPSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCA 97
+PHP H + P P HH H H P A
Sbjct: 53 HPHPPHHPHPPHHPHPPHHPHPPHHHPHPHPDPAA 87
>04_04_1377 - 33064906-33065607
Length = 233
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 132 HHCHHEHNQPCAAEHAHYYDR 70
HH HH H QP E H++++
Sbjct: 185 HHHHHPHLQPHGEEQHHHHEQ 205
>04_04_1263 - 32207636-32207938,32208020-32208170,32208263-32208500,
32208604-32208814,32208927-32209108,32209196-32209297,
32210002-32211187,32212103-32212499,32212551-32212582,
32212885-32213157,32213307-32213394,32213486-32213723,
32213824-32214034,32214119-32214300,32214378-32214479,
32214801-32216224,32216751-32216822,32217688-32217719,
32218186-32218263,32218425-32218512,32218608-32218845,
32219060-32219162,32219386-32219558,32219644-32219745,
32219825-32220606,32220659-32221012,32224055-32224140,
32224250-32224400,32224534-32224771,32224876-32225119,
32225190-32225368,32225577-32225675,32225835-32227083
Length = 3195
Score = 27.9 bits (59), Expect = 6.6
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 201 NPHPSGGLHVVYSPPDGGDPRAQHHC 124
NPHPS G +PPDG PR C
Sbjct: 2342 NPHPSMG-----APPDGKQPRRLRRC 2362
>04_04_0613 +
26617677-26617963,26618726-26618786,26619598-26619832,
26619958-26620196,26620493-26620744,26620844-26621024,
26621810-26621898,26622200-26622273,26622365-26622443
Length = 498
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 150 GDPRAQHHCH-HEHNQPCAAEHAHYYDR 70
G P +QH H H+H QP H Y R
Sbjct: 25 GPPPSQHQQHQHQHQQPPHPHHHQYVQR 52
>02_05_0106 - 25877997-25878677,25878951-25879222,25879317-25879476
Length = 370
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Frame = -2
Query: 159 PDGGDPRA--QHHCHHEHNQPCAAEHAHYYDRFQ 64
PD PR HH HH A H H++ + Q
Sbjct: 183 PDLSSPRQLLPHHHHHHPGSSAALYHGHHHQQLQ 216
>09_01_0121 - 1851777-1852039,1856499-1856703
Length = 155
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 425 AKHRRKQEEEQEPLQSYRKWTP 490
+K R K EQE + +RKW P
Sbjct: 134 SKLRHKSRHEQEDCEGFRKWLP 155
>08_01_0060 - 413088-413999
Length = 303
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -2
Query: 219 IHFQFLNPHPSGGLHVVYSPPDGGDPRAQHHCHHEHN 109
+H L+P PS L + PP P HH HH H+
Sbjct: 45 LHHHPLDPSPSSSL---FPPP----PHHHHHAHHLHH 74
>07_03_0276 +
16166528-16166796,16166824-16167291,16168048-16168414,
16168565-16168587,16170094-16170385
Length = 472
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -1
Query: 385 WSISLVNSSTNCPPVAPKVWRFPRRHR 305
W +++V+ N PP++P RF HR
Sbjct: 154 WVVTIVDLDHNHPPLSPNSLRFLESHR 180
>03_04_0023 +
16537257-16537272,16537515-16537929,16538404-16538466,
16538604-16538607
Length = 165
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -2
Query: 177 HVVYSPPDGGDPRAQHHCHHEHNQPCAAEHAHYYDRFQL 61
H PP G + Q H H H A+HAH ++ QL
Sbjct: 32 HAQEQPPGHGHGQVQRHEHPAHG---GAQHAHGGEQLQL 67
>03_02_0050 + 5272471-5274861
Length = 796
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +1
Query: 187 GRMRVQKLKMNSDKNHAFHNPGLVPDEELSRRGYSMYVGSDGDVESA 327
G R+++LK DK + GLVPDE Y +GD+E+A
Sbjct: 533 GLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC-KEGDLENA 578
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 27.5 bits (58), Expect = 8.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 312 RRGKRQTFGATGGQFVEELTREIDQRQQRQSTAPPFLLQSIEENKKKSRNLYNPTAN 482
RR +R G GG+ VEE R +R S++PP L + + + S + P+A+
Sbjct: 263 RRPRRGPLGGGGGRCVEEARRR--RRWSPISSSPPARLWASQPSAAPSPVIRTPSAS 317
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,374,108
Number of Sequences: 37544
Number of extensions: 472050
Number of successful extensions: 1729
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1597
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1709
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1442939384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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