Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fmgV15g07f
(607 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007242-1|AAP35906.1| 647|Homo sapiens eukaryotic translation ... 32 1.4
BC007847-1|AAH07847.1| 647|Homo sapiens EEF1D protein protein. 32 1.4
AK024550-1|BAB14925.1| 647|Homo sapiens protein ( Homo sapiens ... 32 1.4
BC117150-1|AAI17151.1| 729|Homo sapiens cytoplasmic polyadenyla... 31 3.1
AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein. 31 3.1
AB051460-1|BAB21764.1| 712|Homo sapiens KIAA1673 protein protein. 31 3.1
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 30 5.5
AK126090-1|BAC86433.1| 180|Homo sapiens protein ( Homo sapiens ... 30 5.5
AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calci... 30 5.5
AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel, voltag... 30 7.3
AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel, voltag... 30 7.3
AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel, voltag... 30 7.3
AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel ... 30 7.3
AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha... 30 7.3
AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel ... 30 7.3
Y08266-1|CAA69592.1| 191|Homo sapiens DAN15 protein. 29 9.6
BC050032-1|AAH50032.1| 681|Homo sapiens TXNRD3 protein protein. 29 9.6
BC030028-1|AAH30028.1| 678|Homo sapiens TXNRD3 protein protein. 29 9.6
AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3 pr... 29 9.6
>BT007242-1|AAP35906.1| 647|Homo sapiens eukaryotic translation
elongation factor 1 delta (guanine nucleotide exchange p
protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 374 RDRPEAAEAVDRPAFPAAKHRRKQEEEQEPLQSYRKWTPK 493
+D PE A+ + P + + RK ++ ++PLQ RK +PK
Sbjct: 54 QDDPEDADEAEAPDGGSRRDPRKSQDSRKPLQKKRKRSPK 93
>BC007847-1|AAH07847.1| 647|Homo sapiens EEF1D protein protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 374 RDRPEAAEAVDRPAFPAAKHRRKQEEEQEPLQSYRKWTPK 493
+D PE A+ + P + + RK ++ ++PLQ RK +PK
Sbjct: 54 QDDPEDADEAEAPDGGSRRDPRKSQDSRKPLQKKRKRSPK 93
>AK024550-1|BAB14925.1| 647|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20897 fis, clone ADKA03573. ).
Length = 647
Score = 32.3 bits (70), Expect = 1.4
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 374 RDRPEAAEAVDRPAFPAAKHRRKQEEEQEPLQSYRKWTPK 493
+D PE A+ + P + + RK ++ ++PLQ RK +PK
Sbjct: 54 QDDPEDADEAEAPDGGSRRDPRKSQDSRKPLQKKRKRSPK 93
>BC117150-1|AAI17151.1| 729|Homo sapiens cytoplasmic
polyadenylation element binding protein 4 protein.
Length = 729
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 213 FQFLNPHPSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCAAEH 88
FQ H S G +SP G P +QHH HH H Q ++H
Sbjct: 207 FQNFPHHVSPGFGGSFSPQIG--PLSQHHPHHPHFQHHHSQH 246
>AL353637-4|CAH70683.1| 432|Homo sapiens forkhead box B2 protein.
Length = 432
Score = 31.1 bits (67), Expect = 3.1
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 144 PRAQHHCHHEHNQPCAAEHAHYY 76
P HH HH H+ AA H H++
Sbjct: 138 PHHHHHPHHHHHHHAAAHHHHHH 160
>AB051460-1|BAB21764.1| 712|Homo sapiens KIAA1673 protein protein.
Length = 712
Score = 31.1 bits (67), Expect = 3.1
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = -2
Query: 213 FQFLNPHPSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCAAEH 88
FQ H S G +SP G P +QHH HH H Q ++H
Sbjct: 207 FQNFPHHVSPGFGGSFSPQIG--PLSQHHPHHPHFQHHHSQH 246
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 30.3 bits (65), Expect = 5.5
Identities = 21/52 (40%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = -1
Query: 202 EPSSVRWPACRLLSA*WRR--PSRTAPLPSRTQPAMRS*TRSLL*SFPTPLC 53
+PSS RWPAC L S RR +RT RT P +RS + P C
Sbjct: 155 KPSSWRWPACSLTSRRRRRRPRTRTRTRRPRTWPPRTCSSRSRTAARPPCTC 206
>AK126090-1|BAC86433.1| 180|Homo sapiens protein ( Homo sapiens
cDNA FLJ44102 fis, clone TESTI4044035. ).
Length = 180
Score = 30.3 bits (65), Expect = 5.5
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = -1
Query: 382 SISLVNSSTNCPPVAPK----VWRFPRRHRCPRTWSTLAWTTPHQEPG 251
SI +NS T PP++PK +W FP + W+ L +PH G
Sbjct: 53 SILSLNSMTQLPPLSPKSRLLLWPFPLSLKPASVWTQLL-PSPHSRRG 99
>AF393329-1|AAM67414.1| 2188|Homo sapiens voltage-dependent calcium
channel T-type alpha 1I subunit protein.
Length = 2188
Score = 30.3 bits (65), Expect = 5.5
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 968 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHVHHGPHLA-HRHRHHR 1019
>AL022319-1|CAI19662.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 1003 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLA-HRHRHHR 1054
>AL022312-6|CAI19180.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 1003 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLA-HRHRHHR 1054
>AL008716-1|CAI17903.1| 2016|Homo sapiens calcium channel,
voltage-dependent, alpha 1I subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 1003 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLA-HRHRHHR 1054
>AF211189-1|AAF44626.1| 1981|Homo sapiens T-type calcium channel
alpha1 subunit Alpha1I-a isoform protein.
Length = 1981
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 968 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLA-HRHRHHR 1019
>AF142567-1|AAF25722.1| 2223|Homo sapiens T calcium channel alpha1I
subunit, delta36B splice variant protein.
Length = 2223
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 1003 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLA-HRHRHHR 1054
>AF129133-1|AAD45251.1| 2016|Homo sapiens T-type calcium channel
alpha1I subunit protein.
Length = 2016
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 4/53 (7%)
Frame = -2
Query: 216 HFQFLNPHPSGGLHVVYSPPDGGDPRAQ--H--HCHHEHNQPCAAEHAHYYDR 70
H L+ GG V D G PRA H H HH H+ P A H H + R
Sbjct: 1003 HESLLSAERGGGARVCEVAADEGPPRAAPLHTPHAHHIHHGPHLA-HRHRHHR 1054
>Y08266-1|CAA69592.1| 191|Homo sapiens DAN15 protein.
Length = 191
Score = 29.5 bits (63), Expect = 9.6
Identities = 13/43 (30%), Positives = 18/43 (41%)
Frame = -2
Query: 192 PSGGLHVVYSPPDGGDPRAQHHCHHEHNQPCAAEHAHYYDRFQ 64
P+ L V P + HH HH H+ A H H++ Q
Sbjct: 57 PNHKLKTVGEAPAAPPHQQHHHHHHAHHHHHHAHHLHHHHALQ 99
>BC050032-1|AAH50032.1| 681|Homo sapiens TXNRD3 protein protein.
Length = 681
Score = 29.5 bits (63), Expect = 9.6
Identities = 30/91 (32%), Positives = 38/91 (41%)
Frame = -1
Query: 349 PPVAPKVWRFPRRHRCPRTWSTLAWTTPHQEPGPGCGMRGSYLNSFSVFEPSSVRWPACR 170
P P +RF R R+ S +P Q PGP G G N S VR R
Sbjct: 18 PAPQPPAFRFVSRPGRARSESETLERSPPQSPGP--GKAGDAPNRRS----GHVR--GAR 69
Query: 169 LLSA*WRRPSRTAPLPSRTQPAMRS*TRSLL 77
+LS RR ++P PSR+ A R L+
Sbjct: 70 VLSPPGRRARLSSPGPSRSSEAREELRRHLV 100
>BC030028-1|AAH30028.1| 678|Homo sapiens TXNRD3 protein protein.
Length = 678
Score = 29.5 bits (63), Expect = 9.6
Identities = 30/91 (32%), Positives = 38/91 (41%)
Frame = -1
Query: 349 PPVAPKVWRFPRRHRCPRTWSTLAWTTPHQEPGPGCGMRGSYLNSFSVFEPSSVRWPACR 170
P P +RF R R+ S +P Q PGP G G N S VR R
Sbjct: 15 PAPQPPAFRFVSRPGRARSESETLERSPPQSPGP--GKAGDAPNRRS----GHVR--GAR 66
Query: 169 LLSA*WRRPSRTAPLPSRTQPAMRS*TRSLL 77
+LS RR ++P PSR+ A R L+
Sbjct: 67 VLSPPGRRARLSSPGPSRSSEAREELRRHLV 97
>AJ001515-1|CAA04798.1| 4870|Homo sapiens ryanodine receptor 3
protein.
Length = 4870
Score = 29.5 bits (63), Expect = 9.6
Identities = 14/48 (29%), Positives = 23/48 (47%)
Frame = +2
Query: 188 DG*GFKN*K*IQIRTTHSTTRAWFLMRSCPGEGTPCTWAAMATWKAPD 331
D F+ K +Q +H+TT+ ++ +R G+ C W W PD
Sbjct: 1307 DSEAFQKRKQMQEILSHTTTQCYYAIRIFAGQDPSCVWVG---WVTPD 1351
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,359,509
Number of Sequences: 237096
Number of extensions: 2431541
Number of successful extensions: 11420
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11259
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6410414940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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