Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fmgV15f11r
         (940 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    23   4.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     23   4.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   9.2  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   9.2  
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   9.2  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    22   9.2  

>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +3

Query: 51  LLISKGENTT*KKIAIYCIICLCFFY 128
           LLI   E+T  +    +C++C  FFY
Sbjct: 177 LLIMGNEHTYSETGPSHCVVCQNFFY 202


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 7/13 (53%), Positives = 12/13 (92%)
 Frame = -1

Query: 622 YMIHKSLKNLLIY 584
           Y +H+SLKN+L++
Sbjct: 104 YFVHESLKNVLLW 116


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 736 KLFYHFKTFEI 768
           KLFYH K F+I
Sbjct: 113 KLFYHAKDFDI 123


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +1

Query: 736 KLFYHFKTFEI 768
           KLFYH K F+I
Sbjct: 113 KLFYHAKDFDI 123


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 353 NYLSTLKSCFVNMNFLHFKGSNGMKQSWHDLARCLHSNI 469
           +Y  T +  + N+  ++ +G     Q+WHDL   L S +
Sbjct: 134 HYRRTRRDRYTNLGLVNEQG-----QTWHDLRVALTSEL 167


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 9.2
 Identities = 9/33 (27%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = +1

Query: 325 LWYCFSYLHKLPIYIEV-LFC*YEFPTFQRKQW 420
           L+Y  +Y+ ++P+ + V ++C   FP    + W
Sbjct: 351 LYYNINYIEQIPVPVPVPIYC-GNFPPRSMEPW 382


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 231,422
Number of Sequences: 438
Number of extensions: 4802
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30718506
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)